RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 KIF21AQ7Z4S6 1674 aa13.37□□□□□ -0.27
LINC00346-201ENST00000538077 MAGEC2Q9UBF1 373 aaPredicted RBP13.37□□□□□ -0.27
LINC00346-201ENST00000538077 C9orf84Q5VXU9 1444 aa13.37□□□□□ -0.27
LINC00346-201ENST00000538077 ERC1Q8IUD2 1116 aa13.37□□□□□ -0.27
LINC00346-201ENST00000538077 NUCB2P80303 420 aa13.36□□□□□ -0.27
LINC00346-201ENST00000538077 USP5P45974 858 aa13.36□□□□□ -0.27
LINC00346-201ENST00000538077 PAXIP1Q6ZW49 1069 aaPredicted RBP13.36□□□□□ -0.27
LINC00346-201ENST00000538077 PTCD1O75127 700 aaKnown RBP13.36□□□□□ -0.27
LINC00346-201ENST00000538077 MYCNP04198 464 aaPredicted RBP13.36□□□□□ -0.27
LINC00346-201ENST00000538077 WAPLQ7Z5K2 1190 aa13.35□□□□□ -0.27
LINC00346-201ENST00000538077 NAT10Q9H0A0 1025 aaKnown RBP13.35□□□□□ -0.27
LINC00346-201ENST00000538077 MNS1Q8NEH6 495 aa13.35□□□□□ -0.27
LINC00346-201ENST00000538077 LRRCC1Q9C099 1032 aa13.35□□□□□ -0.27
LINC00346-201ENST00000538077 CASKIN1Q8WXD9 1431 aa13.35□□□□□ -0.27
LINC00346-201ENST00000538077 FIBPO43427 364 aa13.35□□□□□ -0.27
LINC00346-201ENST00000538077 TDO2P48775 406 aa13.35□□□□□ -0.27
LINC00346-201ENST00000538077 FAM13BQ9NYF5 915 aa13.35□□□□□ -0.27
LINC00346-201ENST00000538077 SYCP1Q15431 976 aa13.35□□□□□ -0.27
LINC00346-201ENST00000538077 CAVIN1Q6NZI2 390 aaKnown RBP13.35□□□□□ -0.27
LINC00346-201ENST00000538077 TANGO6Q9C0B7 1094 aa13.35□□□□□ -0.27
LINC00346-201ENST00000538077 PRPF40AO75400 957 aaKnown RBP13.34□□□□□ -0.27
LINC00346-201ENST00000538077 HSP90AA2PQ14568 343 aaPredicted RBP13.34□□□□□ -0.27
LINC00346-201ENST00000538077 TXLNAP40222 546 aa13.34□□□□□ -0.27
LINC00346-201ENST00000538077 SPC24Q8NBT2 197 aa13.34□□□□□ -0.27
LINC00346-201ENST00000538077 SRCIN1Q9C0H9 1055 aa13.34□□□□□ -0.27
LINC00346-201ENST00000538077 IL1RAPL2Q9NP60 686 aa13.34□□□□□ -0.27
LINC00346-201ENST00000538077 BIVM-ERCC5R4GMW8 1640 aa13.34□□□□□ -0.27
LINC00346-201ENST00000538077 STK38Q15208 465 aa13.34□□□□□ -0.27
LINC00346-201ENST00000538077 CWC27Q6UX04 472 aaKnown RBP13.34□□□□□ -0.27
LINC00346-201ENST00000538077 NUTM1Q86Y26 1132 aa13.34□□□□□ -0.27
LINC00346-201ENST00000538077 LRP2BPQ9P2M1 347 aa13.33□□□□□ -0.28
LINC00346-201ENST00000538077 HIP1O00291 1037 aa13.33□□□□□ -0.28
LINC00346-201ENST00000538077 AK7Q96M32 723 aa13.33□□□□□ -0.28
LINC00346-201ENST00000538077 NACAP1Q9BZK3 213 aa13.33□□□□□ -0.28
LINC00346-201ENST00000538077 PEG3Q9GZU2 1588 aa13.33□□□□□ -0.28
LINC00346-201ENST00000538077 SSBP05455 408 aaKnown RBP eCLIP13.33□□□□□ -0.28
LINC00346-201ENST00000538077 MCM10Q7L590 875 aa13.33□□□□□ -0.28
LINC00346-201ENST00000538077 SOGA3Q5TF21 947 aa13.33□□□□□ -0.28
LINC00346-201ENST00000538077 POLA1P09884 1462 aaPredicted RBP13.32□□□□□ -0.28
LINC00346-201ENST00000538077 ZNF76P36508 570 aa13.32□□□□□ -0.28
LINC00346-201ENST00000538077 SEPT11Q9NVA2 429 aaKnown RBP13.32□□□□□ -0.28
LINC00346-201ENST00000538077 IDH1O75874 414 aaKnown RBP13.32□□□□□ -0.28
LINC00346-201ENST00000538077 DCTN1Q14203 1278 aa13.32□□□□□ -0.28
LINC00346-201ENST00000538077 MPRIPQ6WCQ1 1025 aa13.32□□□□□ -0.28
LINC00346-201ENST00000538077 SLC4A8Q2Y0W8 1093 aa13.32□□□□□ -0.28
LINC00346-201ENST00000538077 MPNDQ8N594 471 aa13.32□□□□□ -0.28
LINC00346-201ENST00000538077 ZNF692Q9BU19 519 aaPredicted RBP13.32□□□□□ -0.28
LINC00346-201ENST00000538077 TRIM5Q9C035 493 aa13.32□□□□□ -0.28
LINC00346-201ENST00000538077 IGHMBP2P38935 993 aaKnown RBP13.31□□□□□ -0.28
LINC00346-201ENST00000538077 ABCF2Q9UG63 623 aa13.31□□□□□ -0.28
LINC00346-201ENST00000538077 SRGAP3O43295 1099 aa13.31□□□□□ -0.28
LINC00346-201ENST00000538077 KINO60870 393 aaKnown RBP13.31□□□□□ -0.28
LINC00346-201ENST00000538077 ZPR1O75312 459 aa13.31□□□□□ -0.28
LINC00346-201ENST00000538077 PDCL3Q9H2J4 239 aa13.31□□□□□ -0.28
LINC00346-201ENST00000538077 ANKIB1Q9P2G1 1089 aa13.31□□□□□ -0.28
LINC00346-201ENST00000538077 BRD4O60885 1362 aaPredicted RBP13.31□□□□□ -0.28
LINC00346-201ENST00000538077 CCT4P50991 539 aaKnown RBP13.31□□□□□ -0.28
LINC00346-201ENST00000538077 TMOD3Q9NYL9 352 aa13.31□□□□□ -0.28
LINC00346-201ENST00000538077 TTLL12Q14166 644 aaPredicted RBP13.31□□□□□ -0.28
LINC00346-201ENST00000538077 THUMPD2Q9BTF0 503 aaKnown RBP13.31□□□□□ -0.28
LINC00346-201ENST00000538077 ZNF396Q96N95 335 aaPredicted RBP13.3□□□□□ -0.28
LINC00346-201ENST00000538077 CYP46A1Q9Y6A2 500 aa13.3□□□□□ -0.28
LINC00346-201ENST00000538077 ARAP1Q96P48 1450 aa13.3□□□□□ -0.28
LINC00346-201ENST00000538077 MYD88Q99836 296 aa13.3□□□□□ -0.28
LINC00346-201ENST00000538077 NUDT16Q96DE0 195 aaKnown RBP13.3□□□□□ -0.28
LINC00346-201ENST00000538077 PNISRQ8TF01 805 aaKnown RBP13.29□□□□□ -0.28
LINC00346-201ENST00000538077 GNAT3A8MTJ3 354 aa13.29□□□□□ -0.28
LINC00346-201ENST00000538077 CEBPAP49715 358 aaPredicted RBP13.29□□□□□ -0.28
LINC00346-201ENST00000538077 HECW1Q76N89 1606 aa13.29□□□□□ -0.28
LINC00346-201ENST00000538077 METTL24Q5JXM2 366 aa13.28□□□□□ -0.28
LINC00346-201ENST00000538077 CCDC173Q0VFZ6 552 aa13.28□□□□□ -0.28
LINC00346-201ENST00000538077 ERICH3Q5RHP9 1530 aa13.28□□□□□ -0.28
LINC00346-201ENST00000538077 TRIM22Q8IYM9 498 aa13.28□□□□□ -0.28
LINC00346-201ENST00000538077 TSPY26PQ9H489 355 aa13.28□□□□□ -0.28
LINC00346-201ENST00000538077 AKNAQ7Z591 1439 aa13.28□□□□□ -0.28
LINC00346-201ENST00000538077 ME1P48163 572 aa13.28□□□□□ -0.28
LINC00346-201ENST00000538077 FILIP1LQ4L180 1135 aa13.28□□□□□ -0.28
LINC00346-201ENST00000538077 CDK13Q14004 1512 aaKnown RBP13.28□□□□□ -0.28
LINC00346-201ENST00000538077 POGZQ7Z3K3 1410 aa13.28□□□□□ -0.28
LINC00346-201ENST00000538077 SMARCA5O60264 1052 aaPredicted RBP13.28□□□□□ -0.28
LINC00346-201ENST00000538077 SERPINC1P01008 464 aa13.28□□□□□ -0.28
LINC00346-201ENST00000538077 NBPF8Q3BBV2 869 aa13.27□□□□□ -0.28
LINC00346-201ENST00000538077 UBAC1Q9BSL1 405 aa13.27□□□□□ -0.28
LINC00346-201ENST00000538077 STARD3NLO95772 234 aa13.27□□□□□ -0.28
LINC00346-201ENST00000538077 NASPP49321 788 aaPredicted RBP13.27□□□□□ -0.28
LINC00346-201ENST00000538077 EHBP1L1Q8N3D4 1523 aa13.27□□□□□ -0.28
LINC00346-201ENST00000538077 TEX35Q5T0J7 233 aa13.27□□□□□ -0.29
LINC00346-201ENST00000538077 GCC1Q96CN9 775 aa13.27□□□□□ -0.29
LINC00346-201ENST00000538077 NSD3Q9BZ95 1437 aa13.27□□□□□ -0.29
LINC00346-201ENST00000538077 ZSCAN25Q6NSZ9 544 aa13.27□□□□□ -0.29
LINC00346-201ENST00000538077 JAKMIP1Q96N16 626 aaKnown RBP13.27□□□□□ -0.29
LINC00346-201ENST00000538077 DHX37Q8IY37 1157 aaKnown RBP13.26□□□□□ -0.29
LINC00346-201ENST00000538077 VSIG10Q8N0Z9 540 aa13.26□□□□□ -0.29
LINC00346-201ENST00000538077 SMARCE1Q969G3 411 aa13.26□□□□□ -0.29
LINC00346-201ENST00000538077 MINDY4BA8MYZ0 360 aa13.26□□□□□ -0.29
LINC00346-201ENST00000538077 POLR3DP05423 398 aaPredicted RBP13.26□□□□□ -0.29
LINC00346-201ENST00000538077 PDRG1Q9NUG6 133 aa13.26□□□□□ -0.29
LINC00346-201ENST00000538077 FAM177A1Q8N128 213 aaPredicted RBP13.26□□□□□ -0.29
LINC00346-201ENST00000538077 AIDAQ96BJ3 306 aa13.26□□□□□ -0.29
LINC00346-201ENST00000538077 STAC3Q96MF2 364 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms