RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 PEAK1Q9H792 1746 aa21.06■□□□□ 0.96
LRRK1-211ENST00000538064 ST20-MTHFSA0A0A6YYL1 179 aa21.05■□□□□ 0.96
LRRK1-211ENST00000538064 BAG6P46379 1132 aa21.05■□□□□ 0.96
LRRK1-211ENST00000538064 HDGFL2Q7Z4V5 671 aaPredicted RBP21.05■□□□□ 0.96
LRRK1-211ENST00000538064 ARHGEF25Q86VW2 580 aa21.05■□□□□ 0.96
LRRK1-211ENST00000538064 USP47Q96K76 1375 aa21.05■□□□□ 0.96
LRRK1-211ENST00000538064 SLC12A5Q9H2X9 1139 aa21.04■□□□□ 0.96
LRRK1-211ENST00000538064 WDR17Q8IZU2 1322 aa21.04■□□□□ 0.96
LRRK1-211ENST00000538064 CLSPNQ9HAW4 1339 aa21.04■□□□□ 0.96
LRRK1-211ENST00000538064 SLC24A1O60721 1099 aa21.03■□□□□ 0.96
LRRK1-211ENST00000538064 FAM196AQ6ZSG2 479 aa21.03■□□□□ 0.96
LRRK1-211ENST00000538064 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.03■□□□□ 0.96
LRRK1-211ENST00000538064 TERF2IPQ9NYB0 399 aa21.03■□□□□ 0.96
LRRK1-211ENST00000538064 SBF2Q86WG5 1849 aa21.03■□□□□ 0.96
LRRK1-211ENST00000538064 OVOS2A0A0J9YW53 1432 aa21.03■□□□□ 0.96
LRRK1-211ENST00000538064 OVOS2Q6IE36 1432 aa21.03■□□□□ 0.96
LRRK1-211ENST00000538064 RREB1Q92766 1687 aa21.02■□□□□ 0.96
LRRK1-211ENST00000538064 SOX12O15370 315 aa21.02■□□□□ 0.96
LRRK1-211ENST00000538064 AXIN2Q9Y2T1 843 aa21.02■□□□□ 0.96
LRRK1-211ENST00000538064 PDE3BQ13370 1112 aa21.01■□□□□ 0.95
LRRK1-211ENST00000538064 NME9Q86XW9 330 aa21.01■□□□□ 0.95
LRRK1-211ENST00000538064 RGPD3A6NKT7 1758 aaPredicted RBP21■□□□□ 0.95
LRRK1-211ENST00000538064 RGPD4Q7Z3J3 1758 aa21■□□□□ 0.95
LRRK1-211ENST00000538064 TOM1L2Q6ZVM7 507 aa20.99■□□□□ 0.95
LRRK1-211ENST00000538064 OVOS2A0A0G2JMS6 1433 aa20.98■□□□□ 0.95
LRRK1-211ENST00000538064 LRP5O75197 1615 aa20.98■□□□□ 0.95
LRRK1-211ENST00000538064 TIMELESSQ9UNS1 1208 aa20.98■□□□□ 0.95
LRRK1-211ENST00000538064 MYOM1P52179 1685 aa20.98■□□□□ 0.95
LRRK1-211ENST00000538064 FAM208AQ9UK61 1670 aaKnown RBP20.98■□□□□ 0.95
LRRK1-211ENST00000538064 NUP188Q5SRE5 1749 aa20.98■□□□□ 0.95
LRRK1-211ENST00000538064 KIF20BQ96Q89 1820 aa20.97■□□□□ 0.95
LRRK1-211ENST00000538064 ANKRD36BQ8N2N9 1353 aa20.97■□□□□ 0.95
LRRK1-211ENST00000538064 TRIM37O94972 964 aa20.96■□□□□ 0.95
LRRK1-211ENST00000538064 EN1Q05925 392 aaPredicted RBP20.96■□□□□ 0.95
LRRK1-211ENST00000538064 PARD3Q8TEW0 1356 aa20.96■□□□□ 0.95
LRRK1-211ENST00000538064 CARD10Q9BWT7 1032 aa20.95■□□□□ 0.94
LRRK1-211ENST00000538064 CCDC7Q96M83 1385 aa20.95■□□□□ 0.94
LRRK1-211ENST00000538064 C11orf95C9JLR9 678 aaPredicted RBP20.94■□□□□ 0.94
LRRK1-211ENST00000538064 CSB-PGBD3P0DP91 1061 aa20.94■□□□□ 0.94
LRRK1-211ENST00000538064 TMF1P82094 1093 aa20.94■□□□□ 0.94
LRRK1-211ENST00000538064 CDCA7Q9BWT1 371 aaPredicted RBP20.94■□□□□ 0.94
LRRK1-211ENST00000538064 SRCAPQ6ZRS2 3230 aa20.94■□□□□ 0.94
LRRK1-211ENST00000538064 ERBB3P21860 1342 aa20.93■□□□□ 0.94
LRRK1-211ENST00000538064 DDB1Q16531 1140 aa20.92■□□□□ 0.94
LRRK1-211ENST00000538064 TNS2Q63HR2 1409 aa20.92■□□□□ 0.94
LRRK1-211ENST00000538064 BCL9O00512 1426 aa20.9■□□□□ 0.94
LRRK1-211ENST00000538064 EZH2Q15910 746 aaKnown RBP20.9■□□□□ 0.94
LRRK1-211ENST00000538064 CAMKK2Q96RR4 588 aa20.9■□□□□ 0.94
LRRK1-211ENST00000538064 APBA3O96018 575 aa20.89■□□□□ 0.93
LRRK1-211ENST00000538064 CDCA8Q53HL2 280 aa20.88■□□□□ 0.93
LRRK1-211ENST00000538064 NHSQ6T4R5 1651 aa20.87■□□□□ 0.93
LRRK1-211ENST00000538064 COG3Q96JB2 828 aa20.86■□□□□ 0.93
LRRK1-211ENST00000538064 RGPD2P0DJD1 1756 aa20.85■□□□□ 0.93
LRRK1-211ENST00000538064 PSDA5PKW4 1024 aaPredicted RBP20.85■□□□□ 0.93
LRRK1-211ENST00000538064 MARCH10Q8NA82 808 aaPredicted RBP20.84■□□□□ 0.93
LRRK1-211ENST00000538064 ANKRD24Q8TF21 1146 aa20.84■□□□□ 0.93
LRRK1-211ENST00000538064 RTL1A6NKG5 1358 aa20.84■□□□□ 0.93
LRRK1-211ENST00000538064 IP6K1Q92551 441 aa20.83■□□□□ 0.93
LRRK1-211ENST00000538064 NLRP2Q9NX02 1062 aa20.83■□□□□ 0.93
LRRK1-211ENST00000538064 MAP3K19Q56UN5 1328 aa20.81■□□□□ 0.92
LRRK1-211ENST00000538064 R3HDM1Q15032 1099 aaKnown RBP20.81■□□□□ 0.92
LRRK1-211ENST00000538064 EXOC5O00471 708 aa20.8■□□□□ 0.92
LRRK1-211ENST00000538064 BCL11BQ9C0K0 894 aaPredicted RBP20.8■□□□□ 0.92
LRRK1-211ENST00000538064 SHANK3Q9BYB0 1731 aa20.8■□□□□ 0.92
LRRK1-211ENST00000538064 ANKRD26Q9UPS8 1709 aa20.8■□□□□ 0.92
LRRK1-211ENST00000538064 IL2RBP14784 551 aa20.79■□□□□ 0.92
LRRK1-211ENST00000538064 CCER1Q8TC90 406 aaPredicted RBP20.79■□□□□ 0.92
LRRK1-211ENST00000538064 NSD3Q9BZ95 1437 aa20.78■□□□□ 0.92
LRRK1-211ENST00000538064 FYB1O15117 783 aa20.78■□□□□ 0.92
LRRK1-211ENST00000538064 BTAF1O14981 1849 aa20.78■□□□□ 0.92
LRRK1-211ENST00000538064 HOXC9P31274 260 aa20.77■□□□□ 0.92
LRRK1-211ENST00000538064 PLSCR1O15162 318 aa20.76■□□□□ 0.91
LRRK1-211ENST00000538064 AMPHP49418 695 aa20.76■□□□□ 0.91
LRRK1-211ENST00000538064 GGNBP2Q9H3C7 697 aa20.76■□□□□ 0.91
LRRK1-211ENST00000538064 PTF1AQ7RTS3 328 aa20.75■□□□□ 0.91
LRRK1-211ENST00000538064 FBLN1P23142 703 aa20.74■□□□□ 0.91
LRRK1-211ENST00000538064 NBPF14Q5TI25 921 aa20.74■□□□□ 0.91
LRRK1-211ENST00000538064 LTV1Q96GA3 475 aaPredicted RBP20.74■□□□□ 0.91
LRRK1-211ENST00000538064 KAT6BQ8WYB5 2073 aa20.74■□□□□ 0.91
LRRK1-211ENST00000538064 CASZ1Q86V15 1759 aa20.74■□□□□ 0.91
LRRK1-211ENST00000538064 KIF24Q5T7B8 1368 aa20.73■□□□□ 0.91
LRRK1-211ENST00000538064 DOT1LQ8TEK3 1739 aa20.73■□□□□ 0.91
LRRK1-211ENST00000538064 SMG6Q86US8 1419 aaKnown RBP20.73■□□□□ 0.91
LRRK1-211ENST00000538064 RRS1Q15050 365 aaKnown RBP20.72■□□□□ 0.91
LRRK1-211ENST00000538064 CARD14Q9BXL6 1004 aa20.72■□□□□ 0.91
LRRK1-211ENST00000538064 MEGF6O75095 1541 aa20.72■□□□□ 0.91
LRRK1-211ENST00000538064 MAP2P11137 1827 aaKnown RBP20.71■□□□□ 0.91
LRRK1-211ENST00000538064 FLT4P35916 1363 aa20.71■□□□□ 0.91
LRRK1-211ENST00000538064 EIF4G2P78344 907 aaKnown RBP eCLIP20.7■□□□□ 0.9
LRRK1-211ENST00000538064 PAPPAQ13219 1627 aa20.7■□□□□ 0.9
LRRK1-211ENST00000538064 INSRP06213 1382 aa20.69■□□□□ 0.9
LRRK1-211ENST00000538064 KCNQ2O43526 872 aa20.67■□□□□ 0.9
LRRK1-211ENST00000538064 HSPA5P11021 654 aaKnown RBP20.67■□□□□ 0.9
LRRK1-211ENST00000538064 ANO8Q9HCE9 1232 aaPredicted RBP20.67■□□□□ 0.9
LRRK1-211ENST00000538064 PROM2Q8N271 834 aa20.66■□□□□ 0.9
LRRK1-211ENST00000538064 ACSBG1Q96GR2 724 aa20.66■□□□□ 0.9
LRRK1-211ENST00000538064 CGNL1Q0VF96 1302 aa20.66■□□□□ 0.9
LRRK1-211ENST00000538064 PKD1L3Q7Z443 1732 aa20.66■□□□□ 0.9
LRRK1-211ENST00000538064 TXNRD1Q16881 649 aa20.64■□□□□ 0.89
LRRK1-211ENST00000538064 LY75O60449 1722 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms