RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 CCDC9Q9Y3X0 531 aaKnown RBP11.77□□□□□ -0.53
SPARC-208ENST00000538026 THSD7AQ9UPZ6 1657 aa11.77□□□□□ -0.53
SPARC-208ENST00000538026 LTN1O94822 1766 aa11.75□□□□□ -0.53
SPARC-208ENST00000538026 ZBTB7CA1YPR0 619 aa11.75□□□□□ -0.53
SPARC-208ENST00000538026 KCNH5Q8NCM2 988 aa11.75□□□□□ -0.53
SPARC-208ENST00000538026 EVA1CP58658 441 aa11.74□□□□□ -0.53
SPARC-208ENST00000538026 FAM182BQ5T319 152 aa11.74□□□□□ -0.53
SPARC-208ENST00000538026 KRT27Q7Z3Y8 459 aa11.73□□□□□ -0.53
SPARC-208ENST00000538026 GGNBP2Q9H3C7 697 aa11.73□□□□□ -0.53
SPARC-208ENST00000538026 USP35Q9P2H5 1018 aa11.73□□□□□ -0.53
SPARC-208ENST00000538026 CDCA8Q53HL2 280 aa11.72□□□□□ -0.53
SPARC-208ENST00000538026 BARGINQ6ZT62 677 aa11.72□□□□□ -0.53
SPARC-208ENST00000538026 CRB1P82279 1406 aa11.71□□□□□ -0.53
SPARC-208ENST00000538026 WDR17Q8IZU2 1322 aa11.71□□□□□ -0.53
SPARC-208ENST00000538026 TCP11L2Q8N4U5 519 aa11.71□□□□□ -0.53
SPARC-208ENST00000538026 KIF20BQ96Q89 1820 aa11.71□□□□□ -0.54
SPARC-208ENST00000538026 NSD3Q9BZ95 1437 aa11.7□□□□□ -0.54
SPARC-208ENST00000538026 MAP3K19Q56UN5 1328 aa11.7□□□□□ -0.54
SPARC-208ENST00000538026 RGPD2P0DJD1 1756 aa11.69□□□□□ -0.54
SPARC-208ENST00000538026 KIF7Q2M1P5 1343 aa11.69□□□□□ -0.54
SPARC-208ENST00000538026 RRS1Q15050 365 aaKnown RBP11.69□□□□□ -0.54
SPARC-208ENST00000538026 IP6K1Q92551 441 aa11.69□□□□□ -0.54
SPARC-208ENST00000538026 COG3Q96JB2 828 aa11.69□□□□□ -0.54
SPARC-208ENST00000538026 POLR3GLQ9BT43 218 aa11.69□□□□□ -0.54
SPARC-208ENST00000538026 CARD10Q9BWT7 1032 aa11.69□□□□□ -0.54
SPARC-208ENST00000538026 PANK3Q9H999 370 aa11.69□□□□□ -0.54
SPARC-208ENST00000538026 ABCC6O95255 1503 aa11.69□□□□□ -0.54
SPARC-208ENST00000538026 PEAK1Q9H792 1746 aa11.69□□□□□ -0.54
SPARC-208ENST00000538026 PARP4Q9UKK3 1724 aaKnown RBP11.69□□□□□ -0.54
SPARC-208ENST00000538026 DISP2A7MBM2 1401 aa11.69□□□□□ -0.54
SPARC-208ENST00000538026 ERBB3P21860 1342 aa11.68□□□□□ -0.54
SPARC-208ENST00000538026 WNK3Q9BYP7 1800 aa11.68□□□□□ -0.54
SPARC-208ENST00000538026 TOM1L2Q6ZVM7 507 aa11.68□□□□□ -0.54
SPARC-208ENST00000538026 THRAP3Q9Y2W1 955 aaKnown RBP11.68□□□□□ -0.54
SPARC-208ENST00000538026 A0A0G2JS52 829 aa11.67□□□□□ -0.54
SPARC-208ENST00000538026 HOXC9P31274 260 aa11.67□□□□□ -0.54
SPARC-208ENST00000538026 MYT1Q01538 1121 aa11.67□□□□□ -0.54
SPARC-208ENST00000538026 ANKRD24Q8TF21 1146 aa11.67□□□□□ -0.54
SPARC-208ENST00000538026 MAP2P11137 1827 aaKnown RBP11.67□□□□□ -0.54
SPARC-208ENST00000538026 DEFB132Q7Z7B7 95 aa11.66□□□□□ -0.54
SPARC-208ENST00000538026 LRRC37A3O60309 1634 aa11.66□□□□□ -0.54
SPARC-208ENST00000538026 WASHC2AQ641Q2 1341 aa11.65□□□□□ -0.54
SPARC-208ENST00000538026 PTF1AQ7RTS3 328 aa11.65□□□□□ -0.54
SPARC-208ENST00000538026 BLMP54132 1417 aaPredicted RBP11.65□□□□□ -0.54
SPARC-208ENST00000538026 SBF2Q86WG5 1849 aa11.65□□□□□ -0.55
SPARC-208ENST00000538026 TNS1Q9HBL0 1735 aaKnown RBP11.64□□□□□ -0.55
SPARC-208ENST00000538026 PER1O15534 1290 aaPredicted RBP11.64□□□□□ -0.55
SPARC-208ENST00000538026 HSP90AB2PQ58FF8 381 aa11.64□□□□□ -0.55
SPARC-208ENST00000538026 CCDC125Q86Z20 511 aa11.64□□□□□ -0.55
SPARC-208ENST00000538026 MARCH10Q8NA82 808 aaPredicted RBP11.64□□□□□ -0.55
SPARC-208ENST00000538026 LTV1Q96GA3 475 aaPredicted RBP11.64□□□□□ -0.55
SPARC-208ENST00000538026 EMILIN1Q9Y6C2 1016 aa11.64□□□□□ -0.55
SPARC-208ENST00000538026 FAM208AQ9UK61 1670 aaKnown RBP11.64□□□□□ -0.55
SPARC-208ENST00000538026 CSB-PGBD3P0DP91 1061 aa11.63□□□□□ -0.55
SPARC-208ENST00000538026 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
SPARC-208ENST00000538026 NLRP2Q9NX02 1062 aa11.63□□□□□ -0.55
SPARC-208ENST00000538026 ANKRD26Q9UPS8 1709 aa11.63□□□□□ -0.55
SPARC-208ENST00000538026 TRIM37O94972 964 aa11.62□□□□□ -0.55
SPARC-208ENST00000538026 AMPHP49418 695 aa11.62□□□□□ -0.55
SPARC-208ENST00000538026 NBPF6Q5VWK0 638 aa11.62□□□□□ -0.55
SPARC-208ENST00000538026 NBPF4Q96M43 638 aa11.62□□□□□ -0.55
SPARC-208ENST00000538026 POLKQ9UBT6 870 aa11.62□□□□□ -0.55
SPARC-208ENST00000538026 CCDC7Q96M83 1385 aa11.62□□□□□ -0.55
SPARC-208ENST00000538026 CGNL1Q0VF96 1302 aa11.61□□□□□ -0.55
SPARC-208ENST00000538026 PDE3BQ13370 1112 aa11.61□□□□□ -0.55
SPARC-208ENST00000538026 DDB1Q16531 1140 aa11.61□□□□□ -0.55
SPARC-208ENST00000538026 FAM196AQ6ZSG2 479 aa11.61□□□□□ -0.55
SPARC-208ENST00000538026 KAT6BQ8WYB5 2073 aa11.6□□□□□ -0.55
SPARC-208ENST00000538026 RTL1A6NKG5 1358 aa11.6□□□□□ -0.55
SPARC-208ENST00000538026 INSRP06213 1382 aa11.6□□□□□ -0.55
SPARC-208ENST00000538026 RGPD1P0DJD0 1748 aa11.6□□□□□ -0.55
SPARC-208ENST00000538026 SHANK3Q9BYB0 1731 aa11.6□□□□□ -0.55
SPARC-208ENST00000538026 TNNT2P45379 298 aaPredicted RBP11.59□□□□□ -0.55
SPARC-208ENST00000538026 EN1Q05925 392 aaPredicted RBP11.59□□□□□ -0.55
SPARC-208ENST00000538026 USHBP1Q8N6Y0 703 aa11.59□□□□□ -0.55
SPARC-208ENST00000538026 CDCA7Q9BWT1 371 aaPredicted RBP11.59□□□□□ -0.55
SPARC-208ENST00000538026 FLT4P35916 1363 aa11.58□□□□□ -0.56
SPARC-208ENST00000538026 KIF24Q5T7B8 1368 aa11.58□□□□□ -0.56
SPARC-208ENST00000538026 IL2RBP14784 551 aa11.58□□□□□ -0.56
SPARC-208ENST00000538026 CAMKK2Q96RR4 588 aa11.58□□□□□ -0.56
SPARC-208ENST00000538026 MEGF6O75095 1541 aa11.58□□□□□ -0.56
SPARC-208ENST00000538026 BCL9O00512 1426 aa11.58□□□□□ -0.56
SPARC-208ENST00000538026 TNS2Q63HR2 1409 aa11.58□□□□□ -0.56
SPARC-208ENST00000538026 EXOC5O00471 708 aa11.57□□□□□ -0.56
SPARC-208ENST00000538026 EZH2Q15910 746 aaKnown RBP11.57□□□□□ -0.56
SPARC-208ENST00000538026 NCAPD2Q15021 1401 aa11.57□□□□□ -0.56
SPARC-208ENST00000538026 OVOS2A0A0G2JMS6 1433 aa11.56□□□□□ -0.56
SPARC-208ENST00000538026 KCNQ2O43526 872 aa11.56□□□□□ -0.56
SPARC-208ENST00000538026 SMG6Q86US8 1419 aaKnown RBP11.55□□□□□ -0.56
SPARC-208ENST00000538026 PPM1GO15355 546 aaPredicted RBP11.55□□□□□ -0.56
SPARC-208ENST00000538026 APBA3O96018 575 aa11.55□□□□□ -0.56
SPARC-208ENST00000538026 EIF4A2Q14240 407 aaKnown RBP11.55□□□□□ -0.56
SPARC-208ENST00000538026 PROM2Q8N271 834 aa11.55□□□□□ -0.56
SPARC-208ENST00000538026 EYA1Q99502 592 aa11.55□□□□□ -0.56
SPARC-208ENST00000538026 KNSTRNQ9Y448 316 aa11.55□□□□□ -0.56
SPARC-208ENST00000538026 NSD2O96028 1365 aa11.54□□□□□ -0.56
SPARC-208ENST00000538026 UTRNP46939 3433 aa11.54□□□□□ -0.56
SPARC-208ENST00000538026 BAG6P46379 1132 aa11.53□□□□□ -0.56
SPARC-208ENST00000538026 SF3B2Q13435 895 aaKnown RBP11.53□□□□□ -0.56
SPARC-208ENST00000538026 MORC1Q86VD1 984 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms