RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 MEIOBQ8N635 442 aa10.13□□□□□ -0.79
SRGAP1-203ENST00000537585 ADAM32Q8TC27 787 aa10.13□□□□□ -0.79
SRGAP1-203ENST00000537585 PCMTD1Q96MG8 357 aaPredicted RBP10.13□□□□□ -0.79
SRGAP1-203ENST00000537585 CCDC116Q8IYX3 515 aa10.12□□□□□ -0.79
SRGAP1-203ENST00000537585 PPP1R26Q5T8A7 1209 aaPredicted RBP10.11□□□□□ -0.79
SRGAP1-203ENST00000537585 LINC00528Q8N1L1 170 aa10.11□□□□□ -0.79
SRGAP1-203ENST00000537585 GJD4Q96KN9 370 aaPredicted RBP10.11□□□□□ -0.79
SRGAP1-203ENST00000537585 KCTD15Q96SI1 283 aaPredicted RBP10.11□□□□□ -0.79
SRGAP1-203ENST00000537585 GOPCQ9HD26 462 aa10.11□□□□□ -0.79
SRGAP1-203ENST00000537585 ERBB4Q15303 1308 aa10.1□□□□□ -0.79
SRGAP1-203ENST00000537585 INTS6LQ5JSJ4 861 aaKnown RBP10.1□□□□□ -0.79
SRGAP1-203ENST00000537585 ZBTB33Q86T24 672 aa10.1□□□□□ -0.79
SRGAP1-203ENST00000537585 SLC10A4Q96EP9 437 aa10.1□□□□□ -0.79
SRGAP1-203ENST00000537585 SCARF1Q14162 830 aa10.09□□□□□ -0.79
SRGAP1-203ENST00000537585 NXF1Q9UBU9 619 aaKnown RBP10.09□□□□□ -0.79
SRGAP1-203ENST00000537585 ZC3H4Q9UPT8 1303 aaKnown RBP10.08□□□□□ -0.8
SRGAP1-203ENST00000537585 GPR37L1O60883 481 aa10.08□□□□□ -0.8
SRGAP1-203ENST00000537585 BMP2P12643 396 aa10.08□□□□□ -0.8
SRGAP1-203ENST00000537585 RAB15P59190 212 aa10.08□□□□□ -0.8
SRGAP1-203ENST00000537585 TMPRSS4Q9NRS4 437 aa10.08□□□□□ -0.8
SRGAP1-203ENST00000537585 PTK2Q05397 1052 aa10.07□□□□□ -0.8
SRGAP1-203ENST00000537585 AGBL1Q96MI9 1066 aa10.07□□□□□ -0.8
SRGAP1-203ENST00000537585 DNMT3LQ9UJW3 386 aa10.07□□□□□ -0.8
SRGAP1-203ENST00000537585 EMILIN1Q9Y6C2 1016 aa10.06□□□□□ -0.8
SRGAP1-203ENST00000537585 H3BM21 787 aa10.05□□□□□ -0.8
SRGAP1-203ENST00000537585 PRKCSHP14314 528 aaPredicted RBP10.05□□□□□ -0.8
SRGAP1-203ENST00000537585 GMPRP36959 345 aa10.05□□□□□ -0.8
SRGAP1-203ENST00000537585 WIPF1O43516 503 aa10.04□□□□□ -0.8
SRGAP1-203ENST00000537585 SOS2Q07890 1332 aaPredicted RBP10.04□□□□□ -0.8
SRGAP1-203ENST00000537585 FBXO45P0C2W1 286 aa10.03□□□□□ -0.8
SRGAP1-203ENST00000537585 Q6ZVU0 165 aa10.03□□□□□ -0.8
SRGAP1-203ENST00000537585 MTMR14Q8NCE2 650 aa10.03□□□□□ -0.8
SRGAP1-203ENST00000537585 SNRKQ9NRH2 765 aa10.03□□□□□ -0.8
SRGAP1-203ENST00000537585 GPSM3Q9Y4H4 160 aa10.03□□□□□ -0.8
SRGAP1-203ENST00000537585 MAN1A2O60476 641 aa10.02□□□□□ -0.81
SRGAP1-203ENST00000537585 TMEM259Q4ZIN3 620 aa10.02□□□□□ -0.81
SRGAP1-203ENST00000537585 ZNF784Q8NCA9 323 aaPredicted RBP10.02□□□□□ -0.81
SRGAP1-203ENST00000537585 FIGNL2A6NMB9 653 aa10□□□□□ -0.81
SRGAP1-203ENST00000537585 ERVH48-1M5A8F1 160 aa10□□□□□ -0.81
SRGAP1-203ENST00000537585 LORP23490 312 aaPredicted RBP10□□□□□ -0.81
SRGAP1-203ENST00000537585 ADD1P35611 737 aaKnown RBP10□□□□□ -0.81
SRGAP1-203ENST00000537585 KDF1Q8NAX2 398 aaPredicted RBP10□□□□□ -0.81
SRGAP1-203ENST00000537585 LILRA1O75019 489 aa9.99□□□□□ -0.81
SRGAP1-203ENST00000537585 RELBQ01201 579 aa9.99□□□□□ -0.81
SRGAP1-203ENST00000537585 DZIP3Q86Y13 1208 aaKnown RBP9.99□□□□□ -0.81
SRGAP1-203ENST00000537585 TSEN34Q9BSV6 310 aaKnown RBP9.99□□□□□ -0.81
SRGAP1-203ENST00000537585 PGPEP1Q9NXJ5 209 aa9.99□□□□□ -0.81
SRGAP1-203ENST00000537585 ESPNB1AK53 854 aa9.98□□□□□ -0.81
SRGAP1-203ENST00000537585 UPP2O95045 317 aa9.98□□□□□ -0.81
SRGAP1-203ENST00000537585 CTSOP43234 321 aaPredicted RBP9.98□□□□□ -0.81
SRGAP1-203ENST00000537585 TTLL8A6PVC2 850 aa9.97□□□□□ -0.81
SRGAP1-203ENST00000537585 SPINT1O43278 529 aa9.97□□□□□ -0.81
SRGAP1-203ENST00000537585 INSM2Q96T92 566 aaPredicted RBP9.97□□□□□ -0.81
SRGAP1-203ENST00000537585 ZNF395Q9H8N7 513 aaPredicted RBP9.97□□□□□ -0.81
SRGAP1-203ENST00000537585 CDV3Q9UKY7 258 aaKnown RBP9.97□□□□□ -0.81
SRGAP1-203ENST00000537585 PCDHB9Q9Y5E1 797 aa9.97□□□□□ -0.81
SRGAP1-203ENST00000537585 ZBBXA8MT70 800 aa9.96□□□□□ -0.82
SRGAP1-203ENST00000537585 GIGYF1O75420 1035 aaPredicted RBP9.96□□□□□ -0.82
SRGAP1-203ENST00000537585 NBPF20Q3BBV1 942 aa9.96□□□□□ -0.82
SRGAP1-203ENST00000537585 SLC16A10Q8TF71 515 aa9.96□□□□□ -0.82
SRGAP1-203ENST00000537585 CYLDQ9NQC7 956 aa9.96□□□□□ -0.82
SRGAP1-203ENST00000537585 PPFIA3O75145 1194 aa9.95□□□□□ -0.82
SRGAP1-203ENST00000537585 IRF7Q92985 503 aa9.95□□□□□ -0.82
SRGAP1-203ENST00000537585 DHX9Q08211 1270 aaKnown RBP9.94□□□□□ -0.82
SRGAP1-203ENST00000537585 NPAS3Q8IXF0 933 aa9.94□□□□□ -0.82
SRGAP1-203ENST00000537585 PTSQ03393 145 aa9.93□□□□□ -0.82
SRGAP1-203ENST00000537585 PNMA1Q8ND90 353 aa9.93□□□□□ -0.82
SRGAP1-203ENST00000537585 FOXD4L5Q5VV16 416 aaPredicted RBP9.92□□□□□ -0.82
SRGAP1-203ENST00000537585 ADH1AP07327 375 aa9.91□□□□□ -0.82
SRGAP1-203ENST00000537585 VSIG8P0DPA2 414 aa9.91□□□□□ -0.82
SRGAP1-203ENST00000537585 GPR161Q8N6U8 529 aaKnown RBP9.91□□□□□ -0.82
SRGAP1-203ENST00000537585 SCTRP47872 440 aa9.9□□□□□ -0.82
SRGAP1-203ENST00000537585 BANK1Q8NDB2 785 aa9.9□□□□□ -0.82
SRGAP1-203ENST00000537585 RNF217Q8TC41 542 aa9.9□□□□□ -0.82
SRGAP1-203ENST00000537585 POLMQ9NP87 494 aaPredicted RBP9.9□□□□□ -0.82
SRGAP1-203ENST00000537585 TBC1D2BQ9UPU7 963 aa9.9□□□□□ -0.82
SRGAP1-203ENST00000537585 INSM1Q01101 510 aaPredicted RBP9.89□□□□□ -0.83
SRGAP1-203ENST00000537585 KRT76Q01546 638 aa9.89□□□□□ -0.83
SRGAP1-203ENST00000537585 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.89□□□□□ -0.83
SRGAP1-203ENST00000537585 NDUFB9Q9Y6M9 179 aa9.89□□□□□ -0.83
SRGAP1-203ENST00000537585 NR1H3Q13133 447 aa9.88□□□□□ -0.83
SRGAP1-203ENST00000537585 SENP3-EIF4A1A0A087X0R7 540 aa9.87□□□□□ -0.83
SRGAP1-203ENST00000537585 PTGIRP43119 386 aa9.86□□□□□ -0.83
SRGAP1-203ENST00000537585 CCDC155Q8N6L0 562 aa9.86□□□□□ -0.83
SRGAP1-203ENST00000537585 STK17AQ9UEE5 414 aa9.86□□□□□ -0.83
SRGAP1-203ENST00000537585 SLC35F4A4IF30 521 aa9.85□□□□□ -0.83
SRGAP1-203ENST00000537585 IRF5Q13568 498 aa9.85□□□□□ -0.83
SRGAP1-203ENST00000537585 SEPT12Q8IYM1 358 aa9.84□□□□□ -0.83
SRGAP1-203ENST00000537585 ZSCAN1Q8NBB4 408 aa9.84□□□□□ -0.83
SRGAP1-203ENST00000537585 SOCS7O14512 581 aa9.83□□□□□ -0.84
SRGAP1-203ENST00000537585 CUEDC1Q9NWM3 386 aaPredicted RBP9.83□□□□□ -0.84
SRGAP1-203ENST00000537585 RHOQP17081 205 aa9.82□□□□□ -0.84
SRGAP1-203ENST00000537585 ERVK-9P63128 1117 aa9.82□□□□□ -0.84
SRGAP1-203ENST00000537585 TSGA10IPQ3SY00 556 aa9.82□□□□□ -0.84
SRGAP1-203ENST00000537585 RNFT1Q5M7Z0 435 aa9.82□□□□□ -0.84
SRGAP1-203ENST00000537585 CDCA7Q9BWT1 371 aaPredicted RBP9.82□□□□□ -0.84
SRGAP1-203ENST00000537585 PCDHB11Q9Y5F2 797 aa9.82□□□□□ -0.84
SRGAP1-203ENST00000537585 CCDC85AQ96PX6 553 aaPredicted RBP9.81□□□□□ -0.84
SRGAP1-203ENST00000537585 ATP5J2-PTCD1G3V325 749 aa9.8□□□□□ -0.84
SRGAP1-203ENST00000537585 PRICKLE2Q7Z3G6 844 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms