RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 TOM1L2Q6ZVM7 507 aa13.93□□□□□ -0.18
CCDC170-202ENST00000537358 PARD3Q8TEW0 1356 aa13.93□□□□□ -0.18
CCDC170-202ENST00000537358 SBNO2Q9Y2G9 1366 aa13.93□□□□□ -0.18
CCDC170-202ENST00000537358 PARP4Q9UKK3 1724 aaKnown RBP13.93□□□□□ -0.18
CCDC170-202ENST00000537358 APBA3O96018 575 aa13.92□□□□□ -0.18
CCDC170-202ENST00000537358 LRP5O75197 1615 aa13.91□□□□□ -0.18
CCDC170-202ENST00000537358 PSDA5PKW4 1024 aaPredicted RBP13.91□□□□□ -0.18
CCDC170-202ENST00000537358 CPSF1Q10570 1443 aaKnown RBP13.9□□□□□ -0.18
CCDC170-202ENST00000537358 MON2Q7Z3U7 1717 aa13.9□□□□□ -0.18
CCDC170-202ENST00000537358 SOX12O15370 315 aa13.9□□□□□ -0.18
CCDC170-202ENST00000537358 CSB-PGBD3P0DP91 1061 aa13.9□□□□□ -0.18
CCDC170-202ENST00000537358 EZH2Q15910 746 aaKnown RBP13.9□□□□□ -0.18
CCDC170-202ENST00000537358 HDGFL2Q7Z4V5 671 aaPredicted RBP13.9□□□□□ -0.18
CCDC170-202ENST00000537358 TMC1Q8TDI8 760 aa13.9□□□□□ -0.18
CCDC170-202ENST00000537358 ZBTB22O15209 634 aa13.89□□□□□ -0.19
CCDC170-202ENST00000537358 SLC24A1O60721 1099 aa13.89□□□□□ -0.19
CCDC170-202ENST00000537358 DDB1Q16531 1140 aa13.89□□□□□ -0.19
CCDC170-202ENST00000537358 CDCA7Q9BWT1 371 aaPredicted RBP13.89□□□□□ -0.19
CCDC170-202ENST00000537358 OVOS2A0A0G2JMS6 1433 aa13.89□□□□□ -0.19
CCDC170-202ENST00000537358 OVOS2A0A0J9YW53 1432 aa13.89□□□□□ -0.19
CCDC170-202ENST00000537358 OVOS2Q6IE36 1432 aa13.89□□□□□ -0.19
CCDC170-202ENST00000537358 WDR17Q8IZU2 1322 aa13.89□□□□□ -0.19
CCDC170-202ENST00000537358 COL18A1P39060 1754 aa13.88□□□□□ -0.19
CCDC170-202ENST00000537358 RGPD5Q99666 1765 aa13.88□□□□□ -0.19
CCDC170-202ENST00000537358 ARHGEF25Q86VW2 580 aa13.88□□□□□ -0.19
CCDC170-202ENST00000537358 CAMKK2Q96RR4 588 aa13.88□□□□□ -0.19
CCDC170-202ENST00000537358 TERF2IPQ9NYB0 399 aa13.88□□□□□ -0.19
CCDC170-202ENST00000537358 WNK3Q9BYP7 1800 aa13.87□□□□□ -0.19
CCDC170-202ENST00000537358 ABCC6O95255 1503 aa13.87□□□□□ -0.19
CCDC170-202ENST00000537358 R3HDM1Q15032 1099 aaKnown RBP13.87□□□□□ -0.19
CCDC170-202ENST00000537358 NBPF14Q5TI25 921 aa13.87□□□□□ -0.19
CCDC170-202ENST00000537358 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCDC170-202ENST00000537358 TRIM26Q12899 539 aaPredicted RBP13.86□□□□□ -0.19
CCDC170-202ENST00000537358 LRRC37A3O60309 1634 aa13.86□□□□□ -0.19
CCDC170-202ENST00000537358 RREB1Q92766 1687 aa13.85□□□□□ -0.19
CCDC170-202ENST00000537358 PUS7Q96PZ0 661 aaKnown RBP13.85□□□□□ -0.19
CCDC170-202ENST00000537358 CARD10Q9BWT7 1032 aa13.85□□□□□ -0.19
CCDC170-202ENST00000537358 AXIN2Q9Y2T1 843 aa13.85□□□□□ -0.19
CCDC170-202ENST00000537358 NFAT5O94916 1531 aa13.85□□□□□ -0.19
CCDC170-202ENST00000537358 CCDC7Q96M83 1385 aa13.84□□□□□ -0.19
CCDC170-202ENST00000537358 EDC4Q6P2E9 1401 aaKnown RBP13.84□□□□□ -0.19
CCDC170-202ENST00000537358 SBF2Q86WG5 1849 aa13.84□□□□□ -0.19
CCDC170-202ENST00000537358 USP54Q70EL1 1684 aa13.84□□□□□ -0.19
CCDC170-202ENST00000537358 USP31Q70CQ4 1352 aa13.83□□□□□ -0.19
CCDC170-202ENST00000537358 NINLQ9Y2I6 1382 aa13.83□□□□□ -0.19
CCDC170-202ENST00000537358 LTN1O94822 1766 aa13.83□□□□□ -0.19
CCDC170-202ENST00000537358 NUP188Q5SRE5 1749 aa13.83□□□□□ -0.2
CCDC170-202ENST00000537358 PEAK1Q9H792 1746 aa13.82□□□□□ -0.2
CCDC170-202ENST00000537358 RGPD3A6NKT7 1758 aaPredicted RBP13.82□□□□□ -0.2
CCDC170-202ENST00000537358 RGPD4Q7Z3J3 1758 aa13.82□□□□□ -0.2
CCDC170-202ENST00000537358 EXOC5O00471 708 aa13.82□□□□□ -0.2
CCDC170-202ENST00000537358 SLC12A5Q9H2X9 1139 aa13.82□□□□□ -0.2
CCDC170-202ENST00000537358 NME9Q86XW9 330 aa13.81□□□□□ -0.2
CCDC170-202ENST00000537358 CD163L1Q9NR16 1453 aa13.8□□□□□ -0.2
CCDC170-202ENST00000537358 ST20-MTHFSA0A0A6YYL1 179 aa13.8□□□□□ -0.2
CCDC170-202ENST00000537358 BCL11BQ9C0K0 894 aaPredicted RBP13.8□□□□□ -0.2
CCDC170-202ENST00000537358 NLRP2Q9NX02 1062 aa13.8□□□□□ -0.2
CCDC170-202ENST00000537358 A0A1W2PP64 1363 aa13.8□□□□□ -0.2
CCDC170-202ENST00000537358 PLSCR1O15162 318 aa13.79□□□□□ -0.2
CCDC170-202ENST00000537358 MYCNP04198 464 aaPredicted RBP13.79□□□□□ -0.2
CCDC170-202ENST00000537358 ERBB3P21860 1342 aa13.79□□□□□ -0.2
CCDC170-202ENST00000537358 MARCH10Q8NA82 808 aaPredicted RBP13.78□□□□□ -0.2
CCDC170-202ENST00000537358 BCL9O00512 1426 aa13.78□□□□□ -0.2
CCDC170-202ENST00000537358 KAT6BQ8WYB5 2073 aa13.78□□□□□ -0.2
CCDC170-202ENST00000537358 TMF1P82094 1093 aa13.77□□□□□ -0.21
CCDC170-202ENST00000537358 TNS2Q63HR2 1409 aa13.77□□□□□ -0.21
CCDC170-202ENST00000537358 COG3Q96JB2 828 aa13.77□□□□□ -0.21
CCDC170-202ENST00000537358 FAM208AQ9UK61 1670 aaKnown RBP13.76□□□□□ -0.21
CCDC170-202ENST00000537358 IL2RBP14784 551 aa13.76□□□□□ -0.21
CCDC170-202ENST00000537358 CDCA8Q53HL2 280 aa13.76□□□□□ -0.21
CCDC170-202ENST00000537358 ANKRD24Q8TF21 1146 aa13.76□□□□□ -0.21
CCDC170-202ENST00000537358 TESK2Q96S53 571 aa13.76□□□□□ -0.21
CCDC170-202ENST00000537358 SPON1Q9HCB6 807 aa13.75□□□□□ -0.21
CCDC170-202ENST00000537358 PPP1R1BQ9UD71 204 aaPredicted RBP13.75□□□□□ -0.21
CCDC170-202ENST00000537358 USP47Q96K76 1375 aa13.74□□□□□ -0.21
CCDC170-202ENST00000537358 ANKRD36BQ8N2N9 1353 aa13.73□□□□□ -0.21
CCDC170-202ENST00000537358 AMPHP49418 695 aa13.73□□□□□ -0.21
CCDC170-202ENST00000537358 IP6K1Q92551 441 aa13.73□□□□□ -0.21
CCDC170-202ENST00000537358 NHSQ6T4R5 1651 aa13.72□□□□□ -0.21
CCDC170-202ENST00000537358 KCNQ2O43526 872 aa13.72□□□□□ -0.21
CCDC170-202ENST00000537358 LTV1Q96GA3 475 aaPredicted RBP13.72□□□□□ -0.21
CCDC170-202ENST00000537358 STK32BQ9NY57 414 aa13.71□□□□□ -0.21
CCDC170-202ENST00000537358 U3KPZ7 1027 aaPredicted RBP13.71□□□□□ -0.21
CCDC170-202ENST00000537358 TXNRD1Q16881 649 aa13.7□□□□□ -0.22
CCDC170-202ENST00000537358 ACSBG1Q96GR2 724 aa13.7□□□□□ -0.22
CCDC170-202ENST00000537358 RNF39Q9H2S5 420 aa13.7□□□□□ -0.22
CCDC170-202ENST00000537358 TIMELESSQ9UNS1 1208 aa13.7□□□□□ -0.22
CCDC170-202ENST00000537358 PTF1AQ7RTS3 328 aa13.69□□□□□ -0.22
CCDC170-202ENST00000537358 SMG6Q86US8 1419 aaKnown RBP13.69□□□□□ -0.22
CCDC170-202ENST00000537358 RTL1A6NKG5 1358 aa13.69□□□□□ -0.22
CCDC170-202ENST00000537358 KIF20BQ96Q89 1820 aa13.69□□□□□ -0.22
CCDC170-202ENST00000537358 MAP3K19Q56UN5 1328 aa13.68□□□□□ -0.22
CCDC170-202ENST00000537358 CLSPNQ9HAW4 1339 aa13.68□□□□□ -0.22
CCDC170-202ENST00000537358 HOXC9P31274 260 aa13.68□□□□□ -0.22
CCDC170-202ENST00000537358 ANO8Q9HCE9 1232 aaPredicted RBP13.68□□□□□ -0.22
CCDC170-202ENST00000537358 BTAF1O14981 1849 aa13.68□□□□□ -0.22
CCDC170-202ENST00000537358 PROM2Q8N271 834 aa13.67□□□□□ -0.22
CCDC170-202ENST00000537358 DDX54Q8TDD1 881 aaKnown RBP13.67□□□□□ -0.22
CCDC170-202ENST00000537358 CASZ1Q86V15 1759 aa13.66□□□□□ -0.22
CCDC170-202ENST00000537358 SLC15A2Q16348 729 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms