RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 CRB1P82279 1406 aa24.04■■□□□ 1.44
SFSWAP-205ENST00000537164 AXIN2Q9Y2T1 843 aa24.04■■□□□ 1.44
SFSWAP-205ENST00000537164 THRAP3Q9Y2W1 955 aaKnown RBP24.04■■□□□ 1.44
SFSWAP-205ENST00000537164 LTN1O94822 1766 aa24.03■■□□□ 1.44
SFSWAP-205ENST00000537164 TCP11L2Q8N4U5 519 aa24.02■■□□□ 1.44
SFSWAP-205ENST00000537164 BLMP54132 1417 aaPredicted RBP24.01■■□□□ 1.43
SFSWAP-205ENST00000537164 EIF4G2P78344 907 aaKnown RBP eCLIP24.01■■□□□ 1.43
SFSWAP-205ENST00000537164 PARP4Q9UKK3 1724 aaKnown RBP24.01■■□□□ 1.43
SFSWAP-205ENST00000537164 A0A0G2JS52 829 aa24■■□□□ 1.43
SFSWAP-205ENST00000537164 MYT1Q01538 1121 aa24■■□□□ 1.43
SFSWAP-205ENST00000537164 WDR17Q8IZU2 1322 aa24■■□□□ 1.43
SFSWAP-205ENST00000537164 ZBTB7CA1YPR0 619 aa23.99■■□□□ 1.43
SFSWAP-205ENST00000537164 SOX12O15370 315 aa23.98■■□□□ 1.43
SFSWAP-205ENST00000537164 USP35Q9P2H5 1018 aa23.98■■□□□ 1.43
SFSWAP-205ENST00000537164 WNK3Q9BYP7 1800 aa23.98■■□□□ 1.43
SFSWAP-205ENST00000537164 HSPA5P11021 654 aaKnown RBP23.96■■□□□ 1.43
SFSWAP-205ENST00000537164 KIF20BQ96Q89 1820 aa23.95■■□□□ 1.42
SFSWAP-205ENST00000537164 FYB1O15117 783 aa23.94■■□□□ 1.42
SFSWAP-205ENST00000537164 COG3Q96JB2 828 aa23.94■■□□□ 1.42
SFSWAP-205ENST00000537164 TOM1L2Q6ZVM7 507 aa23.93■■□□□ 1.42
SFSWAP-205ENST00000537164 RGPD1P0DJD0 1748 aa23.93■■□□□ 1.42
SFSWAP-205ENST00000537164 CARD10Q9BWT7 1032 aa23.92■■□□□ 1.42
SFSWAP-205ENST00000537164 ERBB3P21860 1342 aa23.91■■□□□ 1.42
SFSWAP-205ENST00000537164 CARD14Q9BXL6 1004 aa23.91■■□□□ 1.42
SFSWAP-205ENST00000537164 LRRC37A3O60309 1634 aa23.91■■□□□ 1.42
SFSWAP-205ENST00000537164 DISP2A7MBM2 1401 aa23.89■■□□□ 1.41
SFSWAP-205ENST00000537164 TNS1Q9HBL0 1735 aaKnown RBP23.89■■□□□ 1.41
SFSWAP-205ENST00000537164 CCDC7Q96M83 1385 aa23.89■■□□□ 1.41
SFSWAP-205ENST00000537164 FAM182BQ5T319 152 aa23.88■■□□□ 1.41
SFSWAP-205ENST00000537164 FAM196AQ6ZSG2 479 aa23.88■■□□□ 1.41
SFSWAP-205ENST00000537164 IP6K1Q92551 441 aa23.88■■□□□ 1.41
SFSWAP-205ENST00000537164 CDCA7Q9BWT1 371 aaPredicted RBP23.88■■□□□ 1.41
SFSWAP-205ENST00000537164 FAM208AQ9UK61 1670 aaKnown RBP23.88■■□□□ 1.41
SFSWAP-205ENST00000537164 NSD3Q9BZ95 1437 aa23.87■■□□□ 1.41
SFSWAP-205ENST00000537164 PDE3BQ13370 1112 aa23.87■■□□□ 1.41
SFSWAP-205ENST00000537164 PEAK1Q9H792 1746 aa23.87■■□□□ 1.41
SFSWAP-205ENST00000537164 CSB-PGBD3P0DP91 1061 aa23.86■■□□□ 1.41
SFSWAP-205ENST00000537164 SF3B2Q13435 895 aaKnown RBP23.86■■□□□ 1.41
SFSWAP-205ENST00000537164 GGNBP2Q9H3C7 697 aa23.86■■□□□ 1.41
SFSWAP-205ENST00000537164 MAP3K19Q56UN5 1328 aa23.85■■□□□ 1.41
SFSWAP-205ENST00000537164 RTL1A6NKG5 1358 aa23.84■■□□□ 1.41
SFSWAP-205ENST00000537164 C11orf95C9JLR9 678 aaPredicted RBP23.84■■□□□ 1.41
SFSWAP-205ENST00000537164 ANKRD24Q8TF21 1146 aa23.83■■□□□ 1.41
SFSWAP-205ENST00000537164 DDB1Q16531 1140 aa23.82■■□□□ 1.4
SFSWAP-205ENST00000537164 DEFB132Q7Z7B7 95 aa23.82■■□□□ 1.4
SFSWAP-205ENST00000537164 FBLN1P23142 703 aa23.81■■□□□ 1.4
SFSWAP-205ENST00000537164 HOXC9P31274 260 aa23.81■■□□□ 1.4
SFSWAP-205ENST00000537164 SBF2Q86WG5 1849 aa23.81■■□□□ 1.4
SFSWAP-205ENST00000537164 KIF24Q5T7B8 1368 aa23.8■■□□□ 1.4
SFSWAP-205ENST00000537164 OVOS2A0A0G2JMS6 1433 aa23.8■■□□□ 1.4
SFSWAP-205ENST00000537164 BCL9O00512 1426 aa23.8■■□□□ 1.4
SFSWAP-205ENST00000537164 BAG6P46379 1132 aa23.8■■□□□ 1.4
SFSWAP-205ENST00000537164 ANKRD26Q9UPS8 1709 aa23.8■■□□□ 1.4
SFSWAP-205ENST00000537164 CGNL1Q0VF96 1302 aa23.8■■□□□ 1.4
SFSWAP-205ENST00000537164 AMPHP49418 695 aa23.78■■□□□ 1.4
SFSWAP-205ENST00000537164 NLRP2Q9NX02 1062 aa23.78■■□□□ 1.4
SFSWAP-205ENST00000537164 TNS2Q63HR2 1409 aa23.76■■□□□ 1.39
SFSWAP-205ENST00000537164 RGPD2P0DJD1 1756 aa23.76■■□□□ 1.39
SFSWAP-205ENST00000537164 TRIM37O94972 964 aa23.76■■□□□ 1.39
SFSWAP-205ENST00000537164 RRS1Q15050 365 aaKnown RBP23.76■■□□□ 1.39
SFSWAP-205ENST00000537164 POLR3GLQ9BT43 218 aa23.76■■□□□ 1.39
SFSWAP-205ENST00000537164 SRCAPQ6ZRS2 3230 aa23.76■■□□□ 1.39
SFSWAP-205ENST00000537164 MARCH10Q8NA82 808 aaPredicted RBP23.75■■□□□ 1.39
SFSWAP-205ENST00000537164 MAP2P11137 1827 aaKnown RBP23.75■■□□□ 1.39
SFSWAP-205ENST00000537164 EXOC5O00471 708 aa23.74■■□□□ 1.39
SFSWAP-205ENST00000537164 IL2RBP14784 551 aa23.74■■□□□ 1.39
SFSWAP-205ENST00000537164 PANK3Q9H999 370 aa23.74■■□□□ 1.39
SFSWAP-205ENST00000537164 INSRP06213 1382 aa23.73■■□□□ 1.39
SFSWAP-205ENST00000537164 FLT4P35916 1363 aa23.73■■□□□ 1.39
SFSWAP-205ENST00000537164 EN1Q05925 392 aaPredicted RBP23.72■■□□□ 1.39
SFSWAP-205ENST00000537164 PARD3Q8TEW0 1356 aa23.72■■□□□ 1.39
SFSWAP-205ENST00000537164 RGPD3A6NKT7 1758 aaPredicted RBP23.71■■□□□ 1.39
SFSWAP-205ENST00000537164 RGPD4Q7Z3J3 1758 aa23.71■■□□□ 1.39
SFSWAP-205ENST00000537164 KIF7Q2M1P5 1343 aa23.71■■□□□ 1.39
SFSWAP-205ENST00000537164 CAMKK2Q96RR4 588 aa23.71■■□□□ 1.39
SFSWAP-205ENST00000537164 RREB1Q92766 1687 aa23.7■■□□□ 1.39
SFSWAP-205ENST00000537164 NSD2O96028 1365 aa23.7■■□□□ 1.38
SFSWAP-205ENST00000537164 LTV1Q96GA3 475 aaPredicted RBP23.7■■□□□ 1.38
SFSWAP-205ENST00000537164 APBA3O96018 575 aa23.69■■□□□ 1.38
SFSWAP-205ENST00000537164 SMG6Q86US8 1419 aaKnown RBP23.68■■□□□ 1.38
SFSWAP-205ENST00000537164 HSP90AB2PQ58FF8 381 aa23.68■■□□□ 1.38
SFSWAP-205ENST00000537164 EMILIN1Q9Y6C2 1016 aa23.67■■□□□ 1.38
SFSWAP-205ENST00000537164 EZH2Q15910 746 aaKnown RBP23.66■■□□□ 1.38
SFSWAP-205ENST00000537164 NBPF6Q5VWK0 638 aa23.66■■□□□ 1.38
SFSWAP-205ENST00000537164 NBPF4Q96M43 638 aa23.66■■□□□ 1.38
SFSWAP-205ENST00000537164 BCL11BQ9C0K0 894 aaPredicted RBP23.66■■□□□ 1.38
SFSWAP-205ENST00000537164 SHANK3Q9BYB0 1731 aa23.64■■□□□ 1.38
SFSWAP-205ENST00000537164 WASHC2AQ641Q2 1341 aa23.64■■□□□ 1.38
SFSWAP-205ENST00000537164 NHSQ6T4R5 1651 aa23.64■■□□□ 1.38
SFSWAP-205ENST00000537164 POLKQ9UBT6 870 aa23.64■■□□□ 1.37
SFSWAP-205ENST00000537164 PLSCR1O15162 318 aa23.63■■□□□ 1.37
SFSWAP-205ENST00000537164 NCAPD2Q15021 1401 aa23.63■■□□□ 1.37
SFSWAP-205ENST00000537164 NUP188Q5SRE5 1749 aa23.63■■□□□ 1.37
SFSWAP-205ENST00000537164 MEGF6O75095 1541 aa23.62■■□□□ 1.37
SFSWAP-205ENST00000537164 KNSTRNQ9Y448 316 aa23.61■■□□□ 1.37
SFSWAP-205ENST00000537164 PTF1AQ7RTS3 328 aa23.6■■□□□ 1.37
SFSWAP-205ENST00000537164 PER1O15534 1290 aaPredicted RBP23.59■■□□□ 1.37
SFSWAP-205ENST00000537164 AMER1Q5JTC6 1135 aaPredicted RBP23.58■■□□□ 1.37
SFSWAP-205ENST00000537164 ZCRB1Q8TBF4 217 aaKnown RBP23.57■■□□□ 1.36
SFSWAP-205ENST00000537164 PPM1GO15355 546 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms