RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 MAP4K5Q9Y4K4 846 aa13.01□□□□□ -0.33
CCDC7-208ENST00000537047 GPKOWQ92917 476 aaPredicted RBP eCLIP12.99□□□□□ -0.33
CCDC7-208ENST00000537047 ARHGAP9Q9BRR9 750 aa12.99□□□□□ -0.33
CCDC7-208ENST00000537047 PDXDC2PQ6P474 469 aa12.98□□□□□ -0.33
CCDC7-208ENST00000537047 MEIOBQ8N635 442 aa12.97□□□□□ -0.33
CCDC7-208ENST00000537047 CCDC116Q8IYX3 515 aa12.96□□□□□ -0.33
CCDC7-208ENST00000537047 LINC00528Q8N1L1 170 aa12.96□□□□□ -0.33
CCDC7-208ENST00000537047 USP17L8P0C7I0 530 aa12.95□□□□□ -0.34
CCDC7-208ENST00000537047 BMP2P12643 396 aa12.95□□□□□ -0.34
CCDC7-208ENST00000537047 RFC5P40937 340 aa12.95□□□□□ -0.34
CCDC7-208ENST00000537047 MAN1A2O60476 641 aa12.93□□□□□ -0.34
CCDC7-208ENST00000537047 CBLBQ13191 982 aa12.93□□□□□ -0.34
CCDC7-208ENST00000537047 PPP1R26Q5T8A7 1209 aaPredicted RBP12.93□□□□□ -0.34
CCDC7-208ENST00000537047 ZBTB33Q86T24 672 aa12.93□□□□□ -0.34
CCDC7-208ENST00000537047 IL27Q8NEV9 243 aa12.93□□□□□ -0.34
CCDC7-208ENST00000537047 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
CCDC7-208ENST00000537047 ZSCAN1Q8NBB4 408 aa12.92□□□□□ -0.34
CCDC7-208ENST00000537047 KCTD15Q96SI1 283 aaPredicted RBP12.92□□□□□ -0.34
CCDC7-208ENST00000537047 EMILIN1Q9Y6C2 1016 aa12.92□□□□□ -0.34
CCDC7-208ENST00000537047 UPP2O95045 317 aa12.91□□□□□ -0.34
CCDC7-208ENST00000537047 SLC10A4Q96EP9 437 aa12.91□□□□□ -0.34
CCDC7-208ENST00000537047 SOS2Q07890 1332 aaPredicted RBP12.9□□□□□ -0.34
CCDC7-208ENST00000537047 VSIG8P0DPA2 414 aa12.9□□□□□ -0.34
CCDC7-208ENST00000537047 ADAM32Q8TC27 787 aa12.9□□□□□ -0.34
CCDC7-208ENST00000537047 DNMT3LQ9UJW3 386 aa12.9□□□□□ -0.34
CCDC7-208ENST00000537047 PTK2Q05397 1052 aa12.88□□□□□ -0.35
CCDC7-208ENST00000537047 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
CCDC7-208ENST00000537047 INTS6LQ5JSJ4 861 aaKnown RBP12.87□□□□□ -0.35
CCDC7-208ENST00000537047 TSEN34Q9BSV6 310 aaKnown RBP12.87□□□□□ -0.35
CCDC7-208ENST00000537047 TRIM34Q9BYJ4 488 aa12.87□□□□□ -0.35
CCDC7-208ENST00000537047 PPFIA3O75145 1194 aa12.86□□□□□ -0.35
CCDC7-208ENST00000537047 FAM181BA6NEQ2 426 aa12.85□□□□□ -0.35
CCDC7-208ENST00000537047 RAB15P59190 212 aa12.85□□□□□ -0.35
CCDC7-208ENST00000537047 Q6ZVU0 165 aa12.85□□□□□ -0.35
CCDC7-208ENST00000537047 PCMTD1Q96MG8 357 aaPredicted RBP12.85□□□□□ -0.35
CCDC7-208ENST00000537047 AGBL1Q96MI9 1066 aa12.84□□□□□ -0.35
CCDC7-208ENST00000537047 TMPRSS4Q9NRS4 437 aa12.84□□□□□ -0.35
CCDC7-208ENST00000537047 FIGNL2A6NMB9 653 aa12.83□□□□□ -0.36
CCDC7-208ENST00000537047 BRPF1P55201 1214 aaPredicted RBP12.83□□□□□ -0.36
CCDC7-208ENST00000537047 GOPCQ9HD26 462 aa12.83□□□□□ -0.36
CCDC7-208ENST00000537047 PGPEP1Q9NXJ5 209 aa12.83□□□□□ -0.36
CCDC7-208ENST00000537047 GPSM3Q9Y4H4 160 aa12.83□□□□□ -0.36
CCDC7-208ENST00000537047 CDV3Q9UKY7 258 aaKnown RBP12.81□□□□□ -0.36
CCDC7-208ENST00000537047 TTLL8A6PVC2 850 aa12.8□□□□□ -0.36
CCDC7-208ENST00000537047 RELBQ01201 579 aa12.79□□□□□ -0.36
CCDC7-208ENST00000537047 SPINT1O43278 529 aa12.78□□□□□ -0.36
CCDC7-208ENST00000537047 DZIP3Q86Y13 1208 aaKnown RBP12.78□□□□□ -0.36
CCDC7-208ENST00000537047 GJD4Q96KN9 370 aaPredicted RBP12.78□□□□□ -0.36
CCDC7-208ENST00000537047 DHX9Q08211 1270 aaKnown RBP12.77□□□□□ -0.37
CCDC7-208ENST00000537047 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.77□□□□□ -0.37
CCDC7-208ENST00000537047 ZNF784Q8NCA9 323 aaPredicted RBP12.77□□□□□ -0.37
CCDC7-208ENST00000537047 ERVH48-1M5A8F1 160 aa12.76□□□□□ -0.37
CCDC7-208ENST00000537047 ADD1P35611 737 aaKnown RBP12.76□□□□□ -0.37
CCDC7-208ENST00000537047 CTSOP43234 321 aaPredicted RBP12.76□□□□□ -0.37
CCDC7-208ENST00000537047 TMEM259Q4ZIN3 620 aa12.76□□□□□ -0.37
CCDC7-208ENST00000537047 INSM2Q96T92 566 aaPredicted RBP12.76□□□□□ -0.37
CCDC7-208ENST00000537047 PTSQ03393 145 aa12.75□□□□□ -0.37
CCDC7-208ENST00000537047 NBPF20Q3BBV1 942 aa12.75□□□□□ -0.37
CCDC7-208ENST00000537047 ZNF395Q9H8N7 513 aaPredicted RBP12.75□□□□□ -0.37
CCDC7-208ENST00000537047 GPR161Q8N6U8 529 aaKnown RBP12.74□□□□□ -0.37
CCDC7-208ENST00000537047 PNMA1Q8ND90 353 aa12.74□□□□□ -0.37
CCDC7-208ENST00000537047 LILRA1O75019 489 aa12.73□□□□□ -0.37
CCDC7-208ENST00000537047 ESPNB1AK53 854 aa12.72□□□□□ -0.37
CCDC7-208ENST00000537047 KDF1Q8NAX2 398 aaPredicted RBP12.72□□□□□ -0.37
CCDC7-208ENST00000537047 FBXO45P0C2W1 286 aa12.71□□□□□ -0.37
CCDC7-208ENST00000537047 KRT76Q01546 638 aa12.71□□□□□ -0.37
CCDC7-208ENST00000537047 TPRNQ4KMQ1 711 aa12.7□□□□□ -0.38
CCDC7-208ENST00000537047 GIGYF1O75420 1035 aaPredicted RBP12.69□□□□□ -0.38
CCDC7-208ENST00000537047 POLMQ9NP87 494 aaPredicted RBP12.69□□□□□ -0.38
CCDC7-208ENST00000537047 CYLDQ9NQC7 956 aa12.69□□□□□ -0.38
CCDC7-208ENST00000537047 SLC35F4A4IF30 521 aa12.68□□□□□ -0.38
CCDC7-208ENST00000537047 ZBBXA8MT70 800 aa12.68□□□□□ -0.38
CCDC7-208ENST00000537047 CCDC155Q8N6L0 562 aa12.68□□□□□ -0.38
CCDC7-208ENST00000537047 PCDHB9Q9Y5E1 797 aa12.68□□□□□ -0.38
CCDC7-208ENST00000537047 GPR37L1O60883 481 aa12.67□□□□□ -0.38
CCDC7-208ENST00000537047 ADH1AP07327 375 aa12.67□□□□□ -0.38
CCDC7-208ENST00000537047 NANOS1Q8WY41 292 aaKnown RBP12.67□□□□□ -0.38
CCDC7-208ENST00000537047 RNF217Q8TC41 542 aa12.66□□□□□ -0.38
CCDC7-208ENST00000537047 FOXD4L5Q5VV16 416 aaPredicted RBP12.65□□□□□ -0.38
CCDC7-208ENST00000537047 MTMR14Q8NCE2 650 aa12.65□□□□□ -0.38
CCDC7-208ENST00000537047 CNTNAP3BQ96NU0 1288 aa12.65□□□□□ -0.38
CCDC7-208ENST00000537047 CNTNAP3Q9BZ76 1288 aa12.65□□□□□ -0.38
CCDC7-208ENST00000537047 SNRKQ9NRH2 765 aa12.65□□□□□ -0.38
CCDC7-208ENST00000537047 PTGIRP43119 386 aa12.63□□□□□ -0.39
CCDC7-208ENST00000537047 COL25A1Q9BXS0 654 aaPredicted RBP12.62□□□□□ -0.39
CCDC7-208ENST00000537047 SENP3-EIF4A1A0A087X0R7 540 aa12.61□□□□□ -0.39
CCDC7-208ENST00000537047 ITGA6P23229 1130 aa12.6□□□□□ -0.39
CCDC7-208ENST00000537047 RNFT1Q5M7Z0 435 aa12.6□□□□□ -0.39
CCDC7-208ENST00000537047 SEPT12Q8IYM1 358 aa12.6□□□□□ -0.39
CCDC7-208ENST00000537047 VWA5B2Q8N398 1253 aa12.59□□□□□ -0.39
CCDC7-208ENST00000537047 NR1H3Q13133 447 aa12.58□□□□□ -0.4
CCDC7-208ENST00000537047 BANK1Q8NDB2 785 aa12.58□□□□□ -0.4
CCDC7-208ENST00000537047 CDC14CA4D256 554 aa12.56□□□□□ -0.4
CCDC7-208ENST00000537047 SCTRP47872 440 aa12.56□□□□□ -0.4
CCDC7-208ENST00000537047 GSK3AP49840 483 aa12.56□□□□□ -0.4
CCDC7-208ENST00000537047 PRICKLE2Q7Z3G6 844 aa12.55□□□□□ -0.4
CCDC7-208ENST00000537047 CUEDC1Q9NWM3 386 aaPredicted RBP12.55□□□□□ -0.4
CCDC7-208ENST00000537047 ATP5J2-PTCD1G3V325 749 aa12.54□□□□□ -0.4
CCDC7-208ENST00000537047 RHOQP17081 205 aa12.54□□□□□ -0.4
CCDC7-208ENST00000537047 SV2AQ7L0J3 742 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms