RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 SBNO2Q9Y2G9 1366 aa28■■■□□ 2.07
TNFRSF1B-204ENST00000536782 C11orf95C9JLR9 678 aaPredicted RBP28■■■□□ 2.07
TNFRSF1B-204ENST00000536782 LRRC37A3O60309 1634 aa28■■■□□ 2.07
TNFRSF1B-204ENST00000536782 ARHGEF25Q86VW2 580 aa27.99■■■□□ 2.07
TNFRSF1B-204ENST00000536782 AXIN2Q9Y2T1 843 aa27.99■■■□□ 2.07
TNFRSF1B-204ENST00000536782 WDR17Q8IZU2 1322 aa27.97■■■□□ 2.07
TNFRSF1B-204ENST00000536782 SOX12O15370 315 aa27.97■■■□□ 2.07
TNFRSF1B-204ENST00000536782 TONSLQ96HA7 1378 aa27.96■■■□□ 2.07
TNFRSF1B-204ENST00000536782 DDB1Q16531 1140 aa27.95■■■□□ 2.06
TNFRSF1B-204ENST00000536782 OVOS2A0A0G2JMS6 1433 aa27.93■■■□□ 2.06
TNFRSF1B-204ENST00000536782 OVOS2A0A0J9YW53 1432 aa27.93■■■□□ 2.06
TNFRSF1B-204ENST00000536782 OVOS2Q6IE36 1432 aa27.93■■■□□ 2.06
TNFRSF1B-204ENST00000536782 CSB-PGBD3P0DP91 1061 aa27.92■■■□□ 2.06
TNFRSF1B-204ENST00000536782 CDCA7Q9BWT1 371 aaPredicted RBP27.92■■■□□ 2.06
TNFRSF1B-204ENST00000536782 MON2Q7Z3U7 1717 aa27.92■■■□□ 2.06
TNFRSF1B-204ENST00000536782 RGPD3A6NKT7 1758 aaPredicted RBP27.91■■■□□ 2.06
TNFRSF1B-204ENST00000536782 RGPD4Q7Z3J3 1758 aa27.91■■■□□ 2.06
TNFRSF1B-204ENST00000536782 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.91■■■□□ 2.06
TNFRSF1B-204ENST00000536782 NBPF14Q5TI25 921 aa27.9■■■□□ 2.06
TNFRSF1B-204ENST00000536782 TMC1Q8TDI8 760 aa27.9■■■□□ 2.06
TNFRSF1B-204ENST00000536782 NFAT5O94916 1531 aa27.9■■■□□ 2.06
TNFRSF1B-204ENST00000536782 CARD10Q9BWT7 1032 aa27.89■■■□□ 2.06
TNFRSF1B-204ENST00000536782 USP31Q70CQ4 1352 aa27.87■■■□□ 2.05
TNFRSF1B-204ENST00000536782 HDGFL2Q7Z4V5 671 aaPredicted RBP27.87■■■□□ 2.05
TNFRSF1B-204ENST00000536782 CD163L1Q9NR16 1453 aa27.87■■■□□ 2.05
TNFRSF1B-204ENST00000536782 USP54Q70EL1 1684 aa27.85■■■□□ 2.05
TNFRSF1B-204ENST00000536782 PTF1AQ7RTS3 328 aa27.85■■■□□ 2.05
TNFRSF1B-204ENST00000536782 NME9Q86XW9 330 aa27.85■■■□□ 2.05
TNFRSF1B-204ENST00000536782 SLC12A5Q9H2X9 1139 aa27.85■■■□□ 2.05
TNFRSF1B-204ENST00000536782 ABCC6O95255 1503 aa27.85■■■□□ 2.05
TNFRSF1B-204ENST00000536782 MARCH10Q8NA82 808 aaPredicted RBP27.83■■■□□ 2.05
TNFRSF1B-204ENST00000536782 PUS7Q96PZ0 661 aaKnown RBP27.83■■■□□ 2.05
TNFRSF1B-204ENST00000536782 TERF2IPQ9NYB0 399 aa27.83■■■□□ 2.05
TNFRSF1B-204ENST00000536782 CCDC7Q96M83 1385 aa27.83■■■□□ 2.05
TNFRSF1B-204ENST00000536782 PLSCR1O15162 318 aa27.82■■■□□ 2.04
TNFRSF1B-204ENST00000536782 BCL11BQ9C0K0 894 aaPredicted RBP27.82■■■□□ 2.04
TNFRSF1B-204ENST00000536782 EDC4Q6P2E9 1401 aaKnown RBP27.81■■■□□ 2.04
TNFRSF1B-204ENST00000536782 EXOC5O00471 708 aa27.8■■■□□ 2.04
TNFRSF1B-204ENST00000536782 BCL9O00512 1426 aa27.8■■■□□ 2.04
TNFRSF1B-204ENST00000536782 LTN1O94822 1766 aa27.79■■■□□ 2.04
TNFRSF1B-204ENST00000536782 A0A1W2PP64 1363 aa27.78■■■□□ 2.04
TNFRSF1B-204ENST00000536782 CASZ1Q86V15 1759 aa27.77■■■□□ 2.04
TNFRSF1B-204ENST00000536782 ERBB3P21860 1342 aa27.76■■■□□ 2.03
TNFRSF1B-204ENST00000536782 ST20-MTHFSA0A0A6YYL1 179 aa27.75■■■□□ 2.03
TNFRSF1B-204ENST00000536782 NLRP2Q9NX02 1062 aa27.75■■■□□ 2.03
TNFRSF1B-204ENST00000536782 SLC24A1O60721 1099 aa27.74■■■□□ 2.03
TNFRSF1B-204ENST00000536782 PROM2Q8N271 834 aa27.74■■■□□ 2.03
TNFRSF1B-204ENST00000536782 TESK2Q96S53 571 aa27.74■■■□□ 2.03
TNFRSF1B-204ENST00000536782 ANO8Q9HCE9 1232 aaPredicted RBP27.74■■■□□ 2.03
TNFRSF1B-204ENST00000536782 NINLQ9Y2I6 1382 aa27.73■■■□□ 2.03
TNFRSF1B-204ENST00000536782 TRIM26Q12899 539 aaPredicted RBP27.72■■■□□ 2.03
TNFRSF1B-204ENST00000536782 TNS2Q63HR2 1409 aa27.72■■■□□ 2.03
TNFRSF1B-204ENST00000536782 ANKRD24Q8TF21 1146 aa27.71■■■□□ 2.03
TNFRSF1B-204ENST00000536782 IL2RBP14784 551 aa27.69■■■□□ 2.02
TNFRSF1B-204ENST00000536782 SPON1Q9HCB6 807 aa27.69■■■□□ 2.02
TNFRSF1B-204ENST00000536782 KAT6BQ8WYB5 2073 aa27.68■■■□□ 2.02
TNFRSF1B-204ENST00000536782 KCNQ2O43526 872 aa27.67■■■□□ 2.02
TNFRSF1B-204ENST00000536782 PDGFDQ9GZP0 370 aaPredicted RBP27.67■■■□□ 2.02
TNFRSF1B-204ENST00000536782 NHSQ6T4R5 1651 aa27.67■■■□□ 2.02
TNFRSF1B-204ENST00000536782 IP6K1Q92551 441 aa27.65■■■□□ 2.02
TNFRSF1B-204ENST00000536782 COG3Q96JB2 828 aa27.65■■■□□ 2.02
TNFRSF1B-204ENST00000536782 TXNRD1Q16881 649 aa27.64■■■□□ 2.02
TNFRSF1B-204ENST00000536782 PPP1R1BQ9UD71 204 aaPredicted RBP27.64■■■□□ 2.02
TNFRSF1B-204ENST00000536782 ACSBG1Q96GR2 724 aa27.62■■■□□ 2.01
TNFRSF1B-204ENST00000536782 BTAF1O14981 1849 aa27.6■■■□□ 2.01
TNFRSF1B-204ENST00000536782 TMF1P82094 1093 aa27.6■■■□□ 2.01
TNFRSF1B-204ENST00000536782 ANKRD36BQ8N2N9 1353 aa27.6■■■□□ 2.01
TNFRSF1B-204ENST00000536782 LTV1Q96GA3 475 aaPredicted RBP27.59■■■□□ 2.01
TNFRSF1B-204ENST00000536782 STK32BQ9NY57 414 aa27.59■■■□□ 2.01
TNFRSF1B-204ENST00000536782 MYOM1P52179 1685 aa27.58■■■□□ 2.01
TNFRSF1B-204ENST00000536782 USP47Q96K76 1375 aa27.58■■■□□ 2.01
TNFRSF1B-204ENST00000536782 MAP3K19Q56UN5 1328 aa27.57■■■□□ 2
TNFRSF1B-204ENST00000536782 PAPPAQ13219 1627 aa27.56■■■□□ 2
TNFRSF1B-204ENST00000536782 AMPHP49418 695 aa27.56■■■□□ 2
TNFRSF1B-204ENST00000536782 SLC15A2Q16348 729 aa27.56■■■□□ 2
TNFRSF1B-204ENST00000536782 RGPD2P0DJD1 1756 aa27.55■■■□□ 2
TNFRSF1B-204ENST00000536782 HOXC9P31274 260 aa27.55■■■□□ 2
TNFRSF1B-204ENST00000536782 FBLN1P23142 703 aa27.54■■■□□ 2
TNFRSF1B-204ENST00000536782 FAM208AQ9UK61 1670 aaKnown RBP27.54■■■□□ 2
TNFRSF1B-204ENST00000536782 PTGER2P43116 358 aa27.53■■■□□ 2
TNFRSF1B-204ENST00000536782 ZBTB7AO95365 584 aa27.52■■■□□ 2
TNFRSF1B-204ENST00000536782 DDX54Q8TDD1 881 aaKnown RBP27.52■■■□□ 2
TNFRSF1B-204ENST00000536782 FYB1O15117 783 aa27.51■■□□□ 1.99
TNFRSF1B-204ENST00000536782 CDCA8Q53HL2 280 aa27.51■■□□□ 1.99
TNFRSF1B-204ENST00000536782 GGNBP2Q9H3C7 697 aa27.5■■□□□ 1.99
TNFRSF1B-204ENST00000536782 SHANK3Q9BYB0 1731 aa27.5■■□□□ 1.99
TNFRSF1B-204ENST00000536782 RTL1A6NKG5 1358 aa27.48■■□□□ 1.99
TNFRSF1B-204ENST00000536782 UTRNP46939 3433 aa27.47■■□□□ 1.99
TNFRSF1B-204ENST00000536782 DCAF8L1A6NGE4 600 aa27.47■■□□□ 1.99
TNFRSF1B-204ENST00000536782 RRS1Q15050 365 aaKnown RBP27.47■■□□□ 1.99
TNFRSF1B-204ENST00000536782 ATF5Q9Y2D1 282 aaPredicted RBP27.47■■□□□ 1.99
TNFRSF1B-204ENST00000536782 YY1P25490 414 aa27.45■■□□□ 1.98
TNFRSF1B-204ENST00000536782 SGIP1Q9BQI5 828 aa27.45■■□□□ 1.98
TNFRSF1B-204ENST00000536782 TIMELESSQ9UNS1 1208 aa27.45■■□□□ 1.98
TNFRSF1B-204ENST00000536782 ZCRB1Q8TBF4 217 aaKnown RBP27.43■■□□□ 1.98
TNFRSF1B-204ENST00000536782 MTFR1LQ9H019 292 aa27.43■■□□□ 1.98
TNFRSF1B-204ENST00000536782 LRRC4BQ9NT99 713 aa27.43■■□□□ 1.98
TNFRSF1B-204ENST00000536782 QSER1Q2KHR3 1735 aa27.42■■□□□ 1.98
TNFRSF1B-204ENST00000536782 TUBGCP6Q96RT7 1819 aa27.42■■□□□ 1.98
TNFRSF1B-204ENST00000536782 SMG6Q86US8 1419 aaKnown RBP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms