RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 BRD4O60885 1362 aaPredicted RBP15.47■□□□□ 0.07
CHRNB1-202ENST00000536404 SSH2Q76I76 1423 aa15.47■□□□□ 0.07
CHRNB1-202ENST00000536404 ZBTB7CA1YPR0 619 aa15.46■□□□□ 0.07
CHRNB1-202ENST00000536404 BAG6P46379 1132 aa15.45■□□□□ 0.06
CHRNB1-202ENST00000536404 LMO7Q8WWI1 1683 aa15.44■□□□□ 0.06
CHRNB1-202ENST00000536404 EN1Q05925 392 aaPredicted RBP15.44■□□□□ 0.06
CHRNB1-202ENST00000536404 SMG6Q86US8 1419 aaKnown RBP15.44■□□□□ 0.06
CHRNB1-202ENST00000536404 BARGINQ6ZT62 677 aa15.43■□□□□ 0.06
CHRNB1-202ENST00000536404 CARD11Q9BXL7 1154 aa15.43■□□□□ 0.06
CHRNB1-202ENST00000536404 TTC21BQ7Z4L5 1316 aa15.43■□□□□ 0.06
CHRNB1-202ENST00000536404 TCP11L2Q8N4U5 519 aa15.43■□□□□ 0.06
CHRNB1-202ENST00000536404 ZNF692Q9BU19 519 aaPredicted RBP15.43■□□□□ 0.06
CHRNB1-202ENST00000536404 FAM9BQ8IZU0 186 aa15.42■□□□□ 0.06
CHRNB1-202ENST00000536404 SALL2Q9Y467 1007 aaPredicted RBP15.42■□□□□ 0.06
CHRNB1-202ENST00000536404 SLIT3O75094 1523 aa15.42■□□□□ 0.06
CHRNB1-202ENST00000536404 PIK3C2AO00443 1686 aa15.41■□□□□ 0.06
CHRNB1-202ENST00000536404 TRIM37O94972 964 aa15.41■□□□□ 0.06
CHRNB1-202ENST00000536404 FAM196AQ6ZSG2 479 aa15.41■□□□□ 0.06
CHRNB1-202ENST00000536404 COL5A2P05997 1499 aaPredicted RBP15.4■□□□□ 0.06
CHRNB1-202ENST00000536404 AATKQ6ZMQ8 1374 aa15.4■□□□□ 0.06
CHRNB1-202ENST00000536404 KIF7Q2M1P5 1343 aa15.4■□□□□ 0.06
CHRNB1-202ENST00000536404 PDE3BQ13370 1112 aa15.4■□□□□ 0.06
CHRNB1-202ENST00000536404 RGPD1P0DJD0 1748 aa15.4■□□□□ 0.06
CHRNB1-202ENST00000536404 CPSF1Q10570 1443 aaKnown RBP15.4■□□□□ 0.06
CHRNB1-202ENST00000536404 PSDA5PKW4 1024 aaPredicted RBP15.39■□□□□ 0.05
CHRNB1-202ENST00000536404 SOX12O15370 315 aa15.39■□□□□ 0.05
CHRNB1-202ENST00000536404 IRX6P78412 446 aaPredicted RBP15.39■□□□□ 0.05
CHRNB1-202ENST00000536404 AXIN2Q9Y2T1 843 aa15.39■□□□□ 0.05
CHRNB1-202ENST00000536404 THRAP3Q9Y2W1 955 aaKnown RBP15.39■□□□□ 0.05
CHRNB1-202ENST00000536404 AKAP12Q02952 1782 aa15.39■□□□□ 0.05
CHRNB1-202ENST00000536404 KTN1Q86UP2 1357 aaKnown RBP15.39■□□□□ 0.05
CHRNB1-202ENST00000536404 EZH2Q15910 746 aaKnown RBP15.38■□□□□ 0.05
CHRNB1-202ENST00000536404 ARHGEF25Q86VW2 580 aa15.38■□□□□ 0.05
CHRNB1-202ENST00000536404 COL18A1P39060 1754 aa15.37■□□□□ 0.05
CHRNB1-202ENST00000536404 SBNO2Q9Y2G9 1366 aa15.37■□□□□ 0.05
CHRNB1-202ENST00000536404 TTC21AQ8NDW8 1320 aa15.37■□□□□ 0.05
CHRNB1-202ENST00000536404 TNS1Q9HBL0 1735 aaKnown RBP15.37■□□□□ 0.05
CHRNB1-202ENST00000536404 CRB1P82279 1406 aa15.37■□□□□ 0.05
CHRNB1-202ENST00000536404 APBA3O96018 575 aa15.36■□□□□ 0.05
CHRNB1-202ENST00000536404 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.36■□□□□ 0.05
CHRNB1-202ENST00000536404 TMC1Q8TDI8 760 aa15.36■□□□□ 0.05
CHRNB1-202ENST00000536404 CAMKK2Q96RR4 588 aa15.36■□□□□ 0.05
CHRNB1-202ENST00000536404 NUDCQ9Y266 331 aa15.36■□□□□ 0.05
CHRNB1-202ENST00000536404 C11orf95C9JLR9 678 aaPredicted RBP15.35■□□□□ 0.05
CHRNB1-202ENST00000536404 TOM1L2Q6ZVM7 507 aa15.35■□□□□ 0.05
CHRNB1-202ENST00000536404 KCNH5Q8NCM2 988 aa15.35■□□□□ 0.05
CHRNB1-202ENST00000536404 SLC12A5Q9H2X9 1139 aa15.35■□□□□ 0.05
CHRNB1-202ENST00000536404 DISP2A7MBM2 1401 aa15.35■□□□□ 0.05
CHRNB1-202ENST00000536404 RNF123Q5XPI4 1314 aa15.35■□□□□ 0.05
CHRNB1-202ENST00000536404 CD163L1Q9NR16 1453 aa15.34■□□□□ 0.05
CHRNB1-202ENST00000536404 CCDC184Q52MB2 194 aa15.34■□□□□ 0.05
CHRNB1-202ENST00000536404 NME9Q86XW9 330 aa15.34■□□□□ 0.05
CHRNB1-202ENST00000536404 WDR17Q8IZU2 1322 aa15.33■□□□□ 0.05
CHRNB1-202ENST00000536404 R3HDM1Q15032 1099 aaKnown RBP15.33■□□□□ 0.04
CHRNB1-202ENST00000536404 RGPD5Q99666 1765 aa15.32■□□□□ 0.04
CHRNB1-202ENST00000536404 MON2Q7Z3U7 1717 aa15.32■□□□□ 0.04
CHRNB1-202ENST00000536404 PARP4Q9UKK3 1724 aaKnown RBP15.32■□□□□ 0.04
CHRNB1-202ENST00000536404 NFAT5O94916 1531 aa15.32■□□□□ 0.04
CHRNB1-202ENST00000536404 CSB-PGBD3P0DP91 1061 aa15.32■□□□□ 0.04
CHRNB1-202ENST00000536404 B4GALNT3Q6L9W6 998 aa15.32■□□□□ 0.04
CHRNB1-202ENST00000536404 HDGFL2Q7Z4V5 671 aaPredicted RBP15.32■□□□□ 0.04
CHRNB1-202ENST00000536404 PKNOX2Q96KN3 472 aa15.32■□□□□ 0.04
CHRNB1-202ENST00000536404 USP31Q70CQ4 1352 aa15.32■□□□□ 0.04
CHRNB1-202ENST00000536404 ST20-MTHFSA0A0A6YYL1 179 aa15.31■□□□□ 0.04
CHRNB1-202ENST00000536404 DDB1Q16531 1140 aa15.31■□□□□ 0.04
CHRNB1-202ENST00000536404 TESK2Q96S53 571 aa15.31■□□□□ 0.04
CHRNB1-202ENST00000536404 NOP58Q9Y2X3 529 aaKnown RBP15.31■□□□□ 0.04
CHRNB1-202ENST00000536404 USP47Q96K76 1375 aa15.31■□□□□ 0.04
CHRNB1-202ENST00000536404 CARD10Q9BWT7 1032 aa15.3■□□□□ 0.04
CHRNB1-202ENST00000536404 ANP32AP39687 249 aaKnown RBP15.29■□□□□ 0.04
CHRNB1-202ENST00000536404 PUS7Q96PZ0 661 aaKnown RBP15.29■□□□□ 0.04
CHRNB1-202ENST00000536404 RTL5Q5HYW3 569 aaPredicted RBP15.28■□□□□ 0.04
CHRNB1-202ENST00000536404 PTF1AQ7RTS3 328 aa15.28■□□□□ 0.04
CHRNB1-202ENST00000536404 MARCH10Q8NA82 808 aaPredicted RBP15.28■□□□□ 0.04
CHRNB1-202ENST00000536404 CCDC136Q96JN2 1154 aa15.28■□□□□ 0.04
CHRNB1-202ENST00000536404 TERF2IPQ9NYB0 399 aa15.28■□□□□ 0.04
CHRNB1-202ENST00000536404 A0A1W2PP64 1363 aa15.28■□□□□ 0.04
CHRNB1-202ENST00000536404 LRRC37A3O60309 1634 aa15.27■□□□□ 0.04
CHRNB1-202ENST00000536404 PARD3Q8TEW0 1356 aa15.27■□□□□ 0.04
CHRNB1-202ENST00000536404 PEAK1Q9H792 1746 aa15.27■□□□□ 0.03
CHRNB1-202ENST00000536404 OVOS2A0A0G2JMS6 1433 aa15.27■□□□□ 0.03
CHRNB1-202ENST00000536404 OVOS2A0A0J9YW53 1432 aa15.27■□□□□ 0.03
CHRNB1-202ENST00000536404 OVOS2Q6IE36 1432 aa15.27■□□□□ 0.03
CHRNB1-202ENST00000536404 EDC4Q6P2E9 1401 aaKnown RBP15.27■□□□□ 0.03
CHRNB1-202ENST00000536404 LRP5O75197 1615 aa15.26■□□□□ 0.03
CHRNB1-202ENST00000536404 CDCA7Q9BWT1 371 aaPredicted RBP15.26■□□□□ 0.03
CHRNB1-202ENST00000536404 RALBP1Q15311 655 aa15.25■□□□□ 0.03
CHRNB1-202ENST00000536404 WNK3Q9BYP7 1800 aa15.25■□□□□ 0.03
CHRNB1-202ENST00000536404 USP54Q70EL1 1684 aa15.25■□□□□ 0.03
CHRNB1-202ENST00000536404 EXOC5O00471 708 aa15.25■□□□□ 0.03
CHRNB1-202ENST00000536404 GLIPR1L2Q4G1C9 344 aa15.25■□□□□ 0.03
CHRNB1-202ENST00000536404 RREB1Q92766 1687 aa15.24■□□□□ 0.03
CHRNB1-202ENST00000536404 SBF2Q86WG5 1849 aa15.24■□□□□ 0.03
CHRNB1-202ENST00000536404 NLRP2Q9NX02 1062 aa15.24■□□□□ 0.03
CHRNB1-202ENST00000536404 NBPF14Q5TI25 921 aa15.23■□□□□ 0.03
CHRNB1-202ENST00000536404 ANKRD24Q8TF21 1146 aa15.23■□□□□ 0.03
CHRNB1-202ENST00000536404 BCL11BQ9C0K0 894 aaPredicted RBP15.23■□□□□ 0.03
CHRNB1-202ENST00000536404 NUP188Q5SRE5 1749 aa15.23■□□□□ 0.03
CHRNB1-202ENST00000536404 ABCC6O95255 1503 aa15.23■□□□□ 0.03
CHRNB1-202ENST00000536404 PNISRQ8TF01 805 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms