RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 LARP1Q6PKG0 1096 aaKnown RBP18.7■□□□□ 0.58
RPAIN-205ENST00000536255 ABCC6O95255 1503 aa18.69■□□□□ 0.58
RPAIN-205ENST00000536255 AXIN2Q9Y2T1 843 aa18.69■□□□□ 0.58
RPAIN-205ENST00000536255 THSD7AQ9UPZ6 1657 aa18.69■□□□□ 0.58
RPAIN-205ENST00000536255 COG3Q96JB2 828 aa18.68■□□□□ 0.58
RPAIN-205ENST00000536255 USP35Q9P2H5 1018 aa18.68■□□□□ 0.58
RPAIN-205ENST00000536255 KIF7Q2M1P5 1343 aa18.68■□□□□ 0.58
RPAIN-205ENST00000536255 BRWD3Q6RI45 1802 aa18.67■□□□□ 0.58
RPAIN-205ENST00000536255 CRB1P82279 1406 aa18.67■□□□□ 0.58
RPAIN-205ENST00000536255 C11orf95C9JLR9 678 aaPredicted RBP18.67■□□□□ 0.58
RPAIN-205ENST00000536255 KRT27Q7Z3Y8 459 aa18.67■□□□□ 0.58
RPAIN-205ENST00000536255 EP400Q96L91 3159 aa18.67■□□□□ 0.58
RPAIN-205ENST00000536255 BARGINQ6ZT62 677 aa18.66■□□□□ 0.58
RPAIN-205ENST00000536255 CARD14Q9BXL6 1004 aa18.66■□□□□ 0.58
RPAIN-205ENST00000536255 NSD3Q9BZ95 1437 aa18.66■□□□□ 0.58
RPAIN-205ENST00000536255 FYB1O15117 783 aa18.65■□□□□ 0.58
RPAIN-205ENST00000536255 TCP11L2Q8N4U5 519 aa18.65■□□□□ 0.58
RPAIN-205ENST00000536255 THRAP3Q9Y2W1 955 aaKnown RBP18.65■□□□□ 0.58
RPAIN-205ENST00000536255 WDR17Q8IZU2 1322 aa18.65■□□□□ 0.58
RPAIN-205ENST00000536255 GGNBP2Q9H3C7 697 aa18.64■□□□□ 0.57
RPAIN-205ENST00000536255 LTN1O94822 1766 aa18.63■□□□□ 0.57
RPAIN-205ENST00000536255 TOM1L2Q6ZVM7 507 aa18.63■□□□□ 0.57
RPAIN-205ENST00000536255 CCDC7Q96M83 1385 aa18.62■□□□□ 0.57
RPAIN-205ENST00000536255 KIF20BQ96Q89 1820 aa18.62■□□□□ 0.57
RPAIN-205ENST00000536255 RGPD5Q99666 1765 aa18.61■□□□□ 0.57
RPAIN-205ENST00000536255 CSB-PGBD3P0DP91 1061 aa18.61■□□□□ 0.57
RPAIN-205ENST00000536255 ERBB3P21860 1342 aa18.6■□□□□ 0.57
RPAIN-205ENST00000536255 WASHC2AQ641Q2 1341 aa18.6■□□□□ 0.57
RPAIN-205ENST00000536255 PANK3Q9H999 370 aa18.6■□□□□ 0.57
RPAIN-205ENST00000536255 BLMP54132 1417 aaPredicted RBP18.59■□□□□ 0.57
RPAIN-205ENST00000536255 CGNL1Q0VF96 1302 aa18.59■□□□□ 0.57
RPAIN-205ENST00000536255 MAP3K19Q56UN5 1328 aa18.59■□□□□ 0.57
RPAIN-205ENST00000536255 CCDC125Q86Z20 511 aa18.59■□□□□ 0.57
RPAIN-205ENST00000536255 CARD10Q9BWT7 1032 aa18.59■□□□□ 0.57
RPAIN-205ENST00000536255 IP6K1Q92551 441 aa18.58■□□□□ 0.56
RPAIN-205ENST00000536255 FBLN1P23142 703 aa18.57■□□□□ 0.56
RPAIN-205ENST00000536255 ANKRD24Q8TF21 1146 aa18.57■□□□□ 0.56
RPAIN-205ENST00000536255 PARP4Q9UKK3 1724 aaKnown RBP18.57■□□□□ 0.56
RPAIN-205ENST00000536255 RTL1A6NKG5 1358 aa18.56■□□□□ 0.56
RPAIN-205ENST00000536255 FAM182BQ5T319 152 aa18.56■□□□□ 0.56
RPAIN-205ENST00000536255 HOXC9P31274 260 aa18.55■□□□□ 0.56
RPAIN-205ENST00000536255 AMPHP49418 695 aa18.55■□□□□ 0.56
RPAIN-205ENST00000536255 PDE3BQ13370 1112 aa18.55■□□□□ 0.56
RPAIN-205ENST00000536255 RRS1Q15050 365 aaKnown RBP18.55■□□□□ 0.56
RPAIN-205ENST00000536255 CDCA7Q9BWT1 371 aaPredicted RBP18.55■□□□□ 0.56
RPAIN-205ENST00000536255 KNSTRNQ9Y448 316 aa18.55■□□□□ 0.56
RPAIN-205ENST00000536255 WNK3Q9BYP7 1800 aa18.54■□□□□ 0.56
RPAIN-205ENST00000536255 NLRP2Q9NX02 1062 aa18.54■□□□□ 0.56
RPAIN-205ENST00000536255 LRRC37A3O60309 1634 aa18.53■□□□□ 0.56
RPAIN-205ENST00000536255 DISP2A7MBM2 1401 aa18.53■□□□□ 0.56
RPAIN-205ENST00000536255 DDB1Q16531 1140 aa18.52■□□□□ 0.56
RPAIN-205ENST00000536255 SF3B2Q13435 895 aaKnown RBP18.51■□□□□ 0.55
RPAIN-205ENST00000536255 FAM196AQ6ZSG2 479 aa18.51■□□□□ 0.55
RPAIN-205ENST00000536255 LTV1Q96GA3 475 aaPredicted RBP18.51■□□□□ 0.55
RPAIN-205ENST00000536255 NSD2O96028 1365 aa18.51■□□□□ 0.55
RPAIN-205ENST00000536255 KIF24Q5T7B8 1368 aa18.51■□□□□ 0.55
RPAIN-205ENST00000536255 FAM208AQ9UK61 1670 aaKnown RBP18.5■□□□□ 0.55
RPAIN-205ENST00000536255 FLT4P35916 1363 aa18.5■□□□□ 0.55
RPAIN-205ENST00000536255 PEAK1Q9H792 1746 aa18.49■□□□□ 0.55
RPAIN-205ENST00000536255 ANKRD26Q9UPS8 1709 aa18.49■□□□□ 0.55
RPAIN-205ENST00000536255 EMILIN1Q9Y6C2 1016 aa18.48■□□□□ 0.55
RPAIN-205ENST00000536255 RGPD1P0DJD0 1748 aa18.48■□□□□ 0.55
RPAIN-205ENST00000536255 OVOS2A0A0G2JMS6 1433 aa18.48■□□□□ 0.55
RPAIN-205ENST00000536255 TNS2Q63HR2 1409 aa18.48■□□□□ 0.55
RPAIN-205ENST00000536255 SMG6Q86US8 1419 aaKnown RBP18.48■□□□□ 0.55
RPAIN-205ENST00000536255 INSRP06213 1382 aa18.47■□□□□ 0.55
RPAIN-205ENST00000536255 PER1O15534 1290 aaPredicted RBP18.46■□□□□ 0.55
RPAIN-205ENST00000536255 IL2RBP14784 551 aa18.46■□□□□ 0.55
RPAIN-205ENST00000536255 HSP90AB2PQ58FF8 381 aa18.46■□□□□ 0.55
RPAIN-205ENST00000536255 DEFB132Q7Z7B7 95 aa18.46■□□□□ 0.55
RPAIN-205ENST00000536255 EXOC5O00471 708 aa18.45■□□□□ 0.54
RPAIN-205ENST00000536255 TRIM37O94972 964 aa18.45■□□□□ 0.54
RPAIN-205ENST00000536255 BAG6P46379 1132 aa18.45■□□□□ 0.54
RPAIN-205ENST00000536255 TNS1Q9HBL0 1735 aaKnown RBP18.44■□□□□ 0.54
RPAIN-205ENST00000536255 TNNT2P45379 298 aaPredicted RBP18.44■□□□□ 0.54
RPAIN-205ENST00000536255 AMER1Q5JTC6 1135 aaPredicted RBP18.44■□□□□ 0.54
RPAIN-205ENST00000536255 MARCH10Q8NA82 808 aaPredicted RBP18.44■□□□□ 0.54
RPAIN-205ENST00000536255 PPM1GO15355 546 aaPredicted RBP18.43■□□□□ 0.54
RPAIN-205ENST00000536255 MORC1Q86VD1 984 aa18.43■□□□□ 0.54
RPAIN-205ENST00000536255 POLKQ9UBT6 870 aa18.43■□□□□ 0.54
RPAIN-205ENST00000536255 NPC1L1Q9UHC9 1359 aa18.42■□□□□ 0.54
RPAIN-205ENST00000536255 BCL9O00512 1426 aa18.42■□□□□ 0.54
RPAIN-205ENST00000536255 NBPF6Q5VWK0 638 aa18.42■□□□□ 0.54
RPAIN-205ENST00000536255 NBPF4Q96M43 638 aa18.42■□□□□ 0.54
RPAIN-205ENST00000536255 RGPD2P0DJD1 1756 aa18.4■□□□□ 0.54
RPAIN-205ENST00000536255 ZNF316A6NFI3 1004 aaPredicted RBP18.4■□□□□ 0.54
RPAIN-205ENST00000536255 EN1Q05925 392 aaPredicted RBP18.39■□□□□ 0.53
RPAIN-205ENST00000536255 CC2D1BQ5T0F9 858 aaKnown RBP18.39■□□□□ 0.53
RPAIN-205ENST00000536255 USHBP1Q8N6Y0 703 aa18.39■□□□□ 0.53
RPAIN-205ENST00000536255 MAP2P11137 1827 aaKnown RBP18.39■□□□□ 0.53
RPAIN-205ENST00000536255 MEGF6O75095 1541 aa18.39■□□□□ 0.53
RPAIN-205ENST00000536255 APBA3O96018 575 aa18.38■□□□□ 0.53
RPAIN-205ENST00000536255 DDX10Q13206 875 aaKnown RBP18.37■□□□□ 0.53
RPAIN-205ENST00000536255 RAPGEF4Q8WZA2 1011 aa18.36■□□□□ 0.53
RPAIN-205ENST00000536255 SBF2Q86WG5 1849 aa18.35■□□□□ 0.53
RPAIN-205ENST00000536255 NCAPD2Q15021 1401 aa18.35■□□□□ 0.53
RPAIN-205ENST00000536255 PARD3Q8TEW0 1356 aa18.35■□□□□ 0.53
RPAIN-205ENST00000536255 CAMKK2Q96RR4 588 aa18.35■□□□□ 0.53
RPAIN-205ENST00000536255 BCL11BQ9C0K0 894 aaPredicted RBP18.35■□□□□ 0.53
RPAIN-205ENST00000536255 EZH2Q15910 746 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms