RNA–Protein interactions for RNA: ENST00000535993.1

CCND1-202, Transcript of cyclin D1, humanhuman

TSL 2

Gene CCND1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-202ENST00000535993 TMC1Q8TDI8 760 aa17.25■□□□□ 0.35
CCND1-202ENST00000535993 TNS1Q9HBL0 1735 aaKnown RBP17.24■□□□□ 0.35
CCND1-202ENST00000535993 HDGFL2Q7Z4V5 671 aaPredicted RBP17.24■□□□□ 0.35
CCND1-202ENST00000535993 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.24■□□□□ 0.35
CCND1-202ENST00000535993 AKAP12Q02952 1782 aa17.23■□□□□ 0.35
CCND1-202ENST00000535993 OVOS2A0A0G2JMS6 1433 aa17.22■□□□□ 0.35
CCND1-202ENST00000535993 OVOS2A0A0J9YW53 1432 aa17.22■□□□□ 0.35
CCND1-202ENST00000535993 OVOS2Q6IE36 1432 aa17.22■□□□□ 0.35
CCND1-202ENST00000535993 NBPF14Q5TI25 921 aa17.22■□□□□ 0.35
CCND1-202ENST00000535993 PUS7Q96PZ0 661 aaKnown RBP17.22■□□□□ 0.35
CCND1-202ENST00000535993 CARD10Q9BWT7 1032 aa17.22■□□□□ 0.35
CCND1-202ENST00000535993 PCGF6Q9BYE7 350 aa17.22■□□□□ 0.35
CCND1-202ENST00000535993 LRP5O75197 1615 aa17.21■□□□□ 0.35
CCND1-202ENST00000535993 PARP4Q9UKK3 1724 aaKnown RBP17.21■□□□□ 0.35
CCND1-202ENST00000535993 USP31Q70CQ4 1352 aa17.21■□□□□ 0.35
CCND1-202ENST00000535993 TERF2IPQ9NYB0 399 aa17.21■□□□□ 0.35
CCND1-202ENST00000535993 COL18A1P39060 1754 aa17.2■□□□□ 0.34
CCND1-202ENST00000535993 SLC24A1O60721 1099 aa17.2■□□□□ 0.34
CCND1-202ENST00000535993 SLC12A5Q9H2X9 1139 aa17.2■□□□□ 0.34
CCND1-202ENST00000535993 NME9Q86XW9 330 aa17.19■□□□□ 0.34
CCND1-202ENST00000535993 NFAT5O94916 1531 aa17.18■□□□□ 0.34
CCND1-202ENST00000535993 CD163L1Q9NR16 1453 aa17.18■□□□□ 0.34
CCND1-202ENST00000535993 CCDC7Q96M83 1385 aa17.17■□□□□ 0.34
CCND1-202ENST00000535993 ABCC6O95255 1503 aa17.17■□□□□ 0.34
CCND1-202ENST00000535993 EXOC5O00471 708 aa17.17■□□□□ 0.34
CCND1-202ENST00000535993 EDC4Q6P2E9 1401 aaKnown RBP17.17■□□□□ 0.34
CCND1-202ENST00000535993 BCL11BQ9C0K0 894 aaPredicted RBP17.17■□□□□ 0.34
CCND1-202ENST00000535993 MON2Q7Z3U7 1717 aa17.16■□□□□ 0.34
CCND1-202ENST00000535993 PLSCR1O15162 318 aa17.16■□□□□ 0.34
CCND1-202ENST00000535993 MARCH10Q8NA82 808 aaPredicted RBP17.16■□□□□ 0.34
CCND1-202ENST00000535993 USP54Q70EL1 1684 aa17.16■□□□□ 0.34
CCND1-202ENST00000535993 NINLQ9Y2I6 1382 aa17.15■□□□□ 0.34
CCND1-202ENST00000535993 ST20-MTHFSA0A0A6YYL1 179 aa17.15■□□□□ 0.34
CCND1-202ENST00000535993 A0A1W2PP64 1363 aa17.15■□□□□ 0.34
CCND1-202ENST00000535993 LRRC37A3O60309 1634 aa17.14■□□□□ 0.33
CCND1-202ENST00000535993 BCL9O00512 1426 aa17.14■□□□□ 0.33
CCND1-202ENST00000535993 TESK2Q96S53 571 aa17.14■□□□□ 0.33
CCND1-202ENST00000535993 NLRP2Q9NX02 1062 aa17.14■□□□□ 0.33
CCND1-202ENST00000535993 ERBB3P21860 1342 aa17.13■□□□□ 0.33
CCND1-202ENST00000535993 PEAK1Q9H792 1746 aa17.13■□□□□ 0.33
CCND1-202ENST00000535993 RREB1Q92766 1687 aa17.12■□□□□ 0.33
CCND1-202ENST00000535993 CLSPNQ9HAW4 1339 aa17.12■□□□□ 0.33
CCND1-202ENST00000535993 ANKRD24Q8TF21 1146 aa17.11■□□□□ 0.33
CCND1-202ENST00000535993 RGPD5Q99666 1765 aa17.1■□□□□ 0.33
CCND1-202ENST00000535993 IL2RBP14784 551 aa17.1■□□□□ 0.33
CCND1-202ENST00000535993 NUP188Q5SRE5 1749 aa17.1■□□□□ 0.33
CCND1-202ENST00000535993 PTF1AQ7RTS3 328 aa17.09■□□□□ 0.33
CCND1-202ENST00000535993 COG3Q96JB2 828 aa17.09■□□□□ 0.33
CCND1-202ENST00000535993 WNK3Q9BYP7 1800 aa17.09■□□□□ 0.33
CCND1-202ENST00000535993 TNS2Q63HR2 1409 aa17.08■□□□□ 0.32
CCND1-202ENST00000535993 TMF1P82094 1093 aa17.08■□□□□ 0.32
CCND1-202ENST00000535993 IP6K1Q92551 441 aa17.08■□□□□ 0.32
CCND1-202ENST00000535993 SPON1Q9HCB6 807 aa17.07■□□□□ 0.32
CCND1-202ENST00000535993 SBF2Q86WG5 1849 aa17.07■□□□□ 0.32
CCND1-202ENST00000535993 RGPD3A6NKT7 1758 aaPredicted RBP17.06■□□□□ 0.32
CCND1-202ENST00000535993 RGPD4Q7Z3J3 1758 aa17.06■□□□□ 0.32
CCND1-202ENST00000535993 ANKRD36BQ8N2N9 1353 aa17.05■□□□□ 0.32
CCND1-202ENST00000535993 USP47Q96K76 1375 aa17.05■□□□□ 0.32
CCND1-202ENST00000535993 KCNQ2O43526 872 aa17.05■□□□□ 0.32
CCND1-202ENST00000535993 CDCA8Q53HL2 280 aa17.05■□□□□ 0.32
CCND1-202ENST00000535993 PROM2Q8N271 834 aa17.05■□□□□ 0.32
CCND1-202ENST00000535993 TXNRD1Q16881 649 aa17.04■□□□□ 0.32
CCND1-202ENST00000535993 LTV1Q96GA3 475 aaPredicted RBP17.04■□□□□ 0.32
CCND1-202ENST00000535993 PPP1R1BQ9UD71 204 aaPredicted RBP17.04■□□□□ 0.32
CCND1-202ENST00000535993 TIMELESSQ9UNS1 1208 aa17.04■□□□□ 0.32
CCND1-202ENST00000535993 LTN1O94822 1766 aa17.04■□□□□ 0.32
CCND1-202ENST00000535993 AMPHP49418 695 aa17.03■□□□□ 0.32
CCND1-202ENST00000535993 ANO8Q9HCE9 1232 aaPredicted RBP17.03■□□□□ 0.32
CCND1-202ENST00000535993 STK32BQ9NY57 414 aa17.03■□□□□ 0.32
CCND1-202ENST00000535993 ACSBG1Q96GR2 724 aa17.02■□□□□ 0.32
CCND1-202ENST00000535993 MAP3K19Q56UN5 1328 aa17.01■□□□□ 0.31
CCND1-202ENST00000535993 HOXC9P31274 260 aa17.01■□□□□ 0.31
CCND1-202ENST00000535993 FYB1O15117 783 aa16.99■□□□□ 0.31
CCND1-202ENST00000535993 SLC15A2Q16348 729 aa16.99■□□□□ 0.31
CCND1-202ENST00000535993 FBLN1P23142 703 aa16.98■□□□□ 0.31
CCND1-202ENST00000535993 DDX54Q8TDD1 881 aaKnown RBP16.98■□□□□ 0.31
CCND1-202ENST00000535993 GGNBP2Q9H3C7 697 aa16.98■□□□□ 0.31
CCND1-202ENST00000535993 RTL1A6NKG5 1358 aa16.98■□□□□ 0.31
CCND1-202ENST00000535993 DCAF8L1A6NGE4 600 aa16.96■□□□□ 0.31
CCND1-202ENST00000535993 RRS1Q15050 365 aaKnown RBP16.96■□□□□ 0.31
CCND1-202ENST00000535993 NHSQ6T4R5 1651 aa16.96■□□□□ 0.31
CCND1-202ENST00000535993 KAT6BQ8WYB5 2073 aa16.95■□□□□ 0.3
CCND1-202ENST00000535993 FAM208AQ9UK61 1670 aaKnown RBP16.95■□□□□ 0.3
CCND1-202ENST00000535993 ZBTB7AO95365 584 aa16.95■□□□□ 0.3
CCND1-202ENST00000535993 PDGFDQ9GZP0 370 aaPredicted RBP16.95■□□□□ 0.3
CCND1-202ENST00000535993 ZCRB1Q8TBF4 217 aaKnown RBP16.94■□□□□ 0.3
CCND1-202ENST00000535993 SMG6Q86US8 1419 aaKnown RBP16.94■□□□□ 0.3
CCND1-202ENST00000535993 CCER1Q8TC90 406 aaPredicted RBP16.93■□□□□ 0.3
CCND1-202ENST00000535993 CGNL1Q0VF96 1302 aa16.93■□□□□ 0.3
CCND1-202ENST00000535993 SLC27A3Q5K4L6 730 aa16.92■□□□□ 0.3
CCND1-202ENST00000535993 NBPF6Q5VWK0 638 aa16.92■□□□□ 0.3
CCND1-202ENST00000535993 SYTL4Q96C24 671 aaPredicted RBP16.92■□□□□ 0.3
CCND1-202ENST00000535993 NBPF4Q96M43 638 aa16.92■□□□□ 0.3
CCND1-202ENST00000535993 MTFR1LQ9H019 292 aa16.92■□□□□ 0.3
CCND1-202ENST00000535993 ATF5Q9Y2D1 282 aaPredicted RBP16.92■□□□□ 0.3
CCND1-202ENST00000535993 CASZ1Q86V15 1759 aa16.92■□□□□ 0.3
CCND1-202ENST00000535993 RAPGEF4Q8WZA2 1011 aa16.91■□□□□ 0.3
CCND1-202ENST00000535993 KIF24Q5T7B8 1368 aa16.9■□□□□ 0.3
CCND1-202ENST00000535993 PTGER2P43116 358 aa16.9■□□□□ 0.3
CCND1-202ENST00000535993 PRIM1P49642 420 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms