RNA–Protein interactions for RNA: ENST00000535936.1

PAAF1-206, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-206ENST00000535936 LRP5O75197 1615 aa13.06□□□□□ -0.32
PAAF1-206ENST00000535936 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
PAAF1-206ENST00000535936 KIAA1210Q9ULL0 1709 aa13.05□□□□□ -0.32
PAAF1-206ENST00000535936 NLRP6P59044 892 aa13.05□□□□□ -0.32
PAAF1-206ENST00000535936 KCNH5Q8NCM2 988 aa13.04□□□□□ -0.32
PAAF1-206ENST00000535936 CDCA7Q9BWT1 371 aaPredicted RBP13.04□□□□□ -0.32
PAAF1-206ENST00000535936 PPP1R1BQ9UD71 204 aaPredicted RBP13.04□□□□□ -0.32
PAAF1-206ENST00000535936 THSD7AQ9UPZ6 1657 aa13.03□□□□□ -0.32
PAAF1-206ENST00000535936 SPDYE4A6NLX3 237 aa13.03□□□□□ -0.32
PAAF1-206ENST00000535936 LARP1Q6PKG0 1096 aaKnown RBP13.03□□□□□ -0.32
PAAF1-206ENST00000535936 TOM1L2Q6ZVM7 507 aa13.03□□□□□ -0.32
PAAF1-206ENST00000535936 CAMKK2Q96RR4 588 aa13.03□□□□□ -0.32
PAAF1-206ENST00000535936 CABP2Q9NPB3 220 aa13.03□□□□□ -0.32
PAAF1-206ENST00000535936 USP19O94966 1318 aa13.03□□□□□ -0.32
PAAF1-206ENST00000535936 DDB1Q16531 1140 aa13.02□□□□□ -0.33
PAAF1-206ENST00000535936 NBPF1Q3BBV0 1214 aa13.02□□□□□ -0.33
PAAF1-206ENST00000535936 CABP1Q9NZU7 370 aa13.02□□□□□ -0.33
PAAF1-206ENST00000535936 CSB-PGBD3P0DP91 1061 aa13.01□□□□□ -0.33
PAAF1-206ENST00000535936 PHRF1Q9P1Y6 1649 aaKnown RBP13.01□□□□□ -0.33
PAAF1-206ENST00000535936 CRYBG1Q9Y4K1 1723 aa13□□□□□ -0.33
PAAF1-206ENST00000535936 CRB1P82279 1406 aa13□□□□□ -0.33
PAAF1-206ENST00000535936 AATKQ6ZMQ8 1374 aa13□□□□□ -0.33
PAAF1-206ENST00000535936 OVOS2A0A0G2JMS6 1433 aa12.99□□□□□ -0.33
PAAF1-206ENST00000535936 OVOS2A0A0J9YW53 1432 aa12.99□□□□□ -0.33
PAAF1-206ENST00000535936 OVOS2Q6IE36 1432 aa12.99□□□□□ -0.33
PAAF1-206ENST00000535936 SPON1Q9HCB6 807 aa12.99□□□□□ -0.33
PAAF1-206ENST00000535936 EP400Q96L91 3159 aa12.98□□□□□ -0.33
PAAF1-206ENST00000535936 USP6P35125 1406 aa12.98□□□□□ -0.33
PAAF1-206ENST00000535936 TTC21AQ8NDW8 1320 aa12.98□□□□□ -0.33
PAAF1-206ENST00000535936 TOPAZ1Q8N9V7 1692 aa12.98□□□□□ -0.33
PAAF1-206ENST00000535936 NRKQ7Z2Y5 1582 aa12.98□□□□□ -0.33
PAAF1-206ENST00000535936 ROCK2O75116 1388 aaKnown RBP12.97□□□□□ -0.33
PAAF1-206ENST00000535936 CAMTA1Q9Y6Y1 1673 aa12.97□□□□□ -0.33
PAAF1-206ENST00000535936 COL5A2P05997 1499 aaPredicted RBP12.97□□□□□ -0.33
PAAF1-206ENST00000535936 WDR17Q8IZU2 1322 aa12.96□□□□□ -0.33
PAAF1-206ENST00000535936 PLSCR1O15162 318 aa12.96□□□□□ -0.33
PAAF1-206ENST00000535936 EXOC5O00471 708 aa12.95□□□□□ -0.34
PAAF1-206ENST00000535936 KCNQ2O43526 872 aa12.95□□□□□ -0.34
PAAF1-206ENST00000535936 L3MBTL2Q969R5 705 aa12.95□□□□□ -0.34
PAAF1-206ENST00000535936 BCL11BQ9C0K0 894 aaPredicted RBP12.95□□□□□ -0.34
PAAF1-206ENST00000535936 TNS1Q9HBL0 1735 aaKnown RBP12.95□□□□□ -0.34
PAAF1-206ENST00000535936 PRKAR2AP13861 404 aaKnown RBP12.94□□□□□ -0.34
PAAF1-206ENST00000535936 NEUROD1Q13562 356 aa12.94□□□□□ -0.34
PAAF1-206ENST00000535936 CCDC7Q96M83 1385 aa12.94□□□□□ -0.34
PAAF1-206ENST00000535936 TTC21BQ7Z4L5 1316 aa12.93□□□□□ -0.34
PAAF1-206ENST00000535936 SLC24A1O60721 1099 aa12.93□□□□□ -0.34
PAAF1-206ENST00000535936 PRR29P0C7W0 189 aa12.93□□□□□ -0.34
PAAF1-206ENST00000535936 HDGFL2Q7Z4V5 671 aaPredicted RBP12.93□□□□□ -0.34
PAAF1-206ENST00000535936 CARD10Q9BWT7 1032 aa12.93□□□□□ -0.34
PAAF1-206ENST00000535936 SOX12O15370 315 aa12.92□□□□□ -0.34
PAAF1-206ENST00000535936 ARHGEF25Q86VW2 580 aa12.92□□□□□ -0.34
PAAF1-206ENST00000535936 STK32BQ9NY57 414 aa12.92□□□□□ -0.34
PAAF1-206ENST00000535936 LMO7Q8WWI1 1683 aa12.92□□□□□ -0.34
PAAF1-206ENST00000535936 QRICH2Q9H0J4 1663 aa12.92□□□□□ -0.34
PAAF1-206ENST00000535936 KTN1Q86UP2 1357 aaKnown RBP12.92□□□□□ -0.34
PAAF1-206ENST00000535936 PARP4Q9UKK3 1724 aaKnown RBP12.91□□□□□ -0.34
PAAF1-206ENST00000535936 CPSF1Q10570 1443 aaKnown RBP12.91□□□□□ -0.34
PAAF1-206ENST00000535936 YY1P25490 414 aa12.91□□□□□ -0.34
PAAF1-206ENST00000535936 SLIT3O75094 1523 aa12.91□□□□□ -0.34
PAAF1-206ENST00000535936 NINLQ9Y2I6 1382 aa12.91□□□□□ -0.34
PAAF1-206ENST00000535936 TERF2IPQ9NYB0 399 aa12.9□□□□□ -0.34
PAAF1-206ENST00000535936 TRPM1Q7Z4N2 1603 aa12.9□□□□□ -0.34
PAAF1-206ENST00000535936 TMC1Q8TDI8 760 aa12.89□□□□□ -0.35
PAAF1-206ENST00000535936 CARD11Q9BXL7 1154 aa12.89□□□□□ -0.35
PAAF1-206ENST00000535936 BCL9O00512 1426 aa12.88□□□□□ -0.35
PAAF1-206ENST00000535936 RREB1Q92766 1687 aa12.87□□□□□ -0.35
PAAF1-206ENST00000535936 HMGB2P26583 209 aaKnown RBP12.87□□□□□ -0.35
PAAF1-206ENST00000535936 CHADLQ6NUI6 762 aa12.87□□□□□ -0.35
PAAF1-206ENST00000535936 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.87□□□□□ -0.35
PAAF1-206ENST00000535936 SIN3AQ96ST3 1273 aa12.87□□□□□ -0.35
PAAF1-206ENST00000535936 NLRP2Q9NX02 1062 aa12.87□□□□□ -0.35
PAAF1-206ENST00000535936 AXIN2Q9Y2T1 843 aa12.87□□□□□ -0.35
PAAF1-206ENST00000535936 SBNO2Q9Y2G9 1366 aa12.86□□□□□ -0.35
PAAF1-206ENST00000535936 IL2RBP14784 551 aa12.86□□□□□ -0.35
PAAF1-206ENST00000535936 TXNRD1Q16881 649 aa12.86□□□□□ -0.35
PAAF1-206ENST00000535936 MARCH10Q8NA82 808 aaPredicted RBP12.86□□□□□ -0.35
PAAF1-206ENST00000535936 ABCC6O95255 1503 aa12.86□□□□□ -0.35
PAAF1-206ENST00000535936 TONSLQ96HA7 1378 aa12.85□□□□□ -0.35
PAAF1-206ENST00000535936 PUS7Q96PZ0 661 aaKnown RBP12.85□□□□□ -0.35
PAAF1-206ENST00000535936 NUP188Q5SRE5 1749 aa12.85□□□□□ -0.35
PAAF1-206ENST00000535936 HAX1O00165 279 aa12.84□□□□□ -0.35
PAAF1-206ENST00000535936 SLC15A2Q16348 729 aa12.84□□□□□ -0.35
PAAF1-206ENST00000535936 RGPD3A6NKT7 1758 aaPredicted RBP12.84□□□□□ -0.35
PAAF1-206ENST00000535936 RGPD4Q7Z3J3 1758 aa12.84□□□□□ -0.35
PAAF1-206ENST00000535936 USP31Q70CQ4 1352 aa12.83□□□□□ -0.36
PAAF1-206ENST00000535936 LRRC37A3O60309 1634 aa12.83□□□□□ -0.36
PAAF1-206ENST00000535936 PIK3C2AO00443 1686 aa12.83□□□□□ -0.36
PAAF1-206ENST00000535936 TNS2Q63HR2 1409 aa12.82□□□□□ -0.36
PAAF1-206ENST00000535936 SRCAPQ6ZRS2 3230 aa12.82□□□□□ -0.36
PAAF1-206ENST00000535936 MTFR1LQ9H019 292 aa12.82□□□□□ -0.36
PAAF1-206ENST00000535936 ERBB3P21860 1342 aa12.82□□□□□ -0.36
PAAF1-206ENST00000535936 ZBTB7AO95365 584 aa12.81□□□□□ -0.36
PAAF1-206ENST00000535936 ANKRD24Q8TF21 1146 aa12.81□□□□□ -0.36
PAAF1-206ENST00000535936 COG3Q96JB2 828 aa12.81□□□□□ -0.36
PAAF1-206ENST00000535936 EDC4Q6P2E9 1401 aaKnown RBP12.8□□□□□ -0.36
PAAF1-206ENST00000535936 AKAP12Q02952 1782 aa12.8□□□□□ -0.36
PAAF1-206ENST00000535936 NME9Q86XW9 330 aa12.8□□□□□ -0.36
PAAF1-206ENST00000535936 ANO8Q9HCE9 1232 aaPredicted RBP12.8□□□□□ -0.36
PAAF1-206ENST00000535936 PEAK1Q9H792 1746 aa12.79□□□□□ -0.36
PAAF1-206ENST00000535936 POLD1P28340 1107 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms