RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 TMF1P82094 1093 aa23.03■■□□□ 1.28
ATL3-202ENST00000535789 HDGFL2Q7Z4V5 671 aaPredicted RBP23.03■■□□□ 1.28
ATL3-202ENST00000535789 AXIN2Q9Y2T1 843 aa23.03■■□□□ 1.28
ATL3-202ENST00000535789 CRB1P82279 1406 aa23.02■■□□□ 1.28
ATL3-202ENST00000535789 ZBTB7CA1YPR0 619 aa23.02■■□□□ 1.28
ATL3-202ENST00000535789 TERF2IPQ9NYB0 399 aa23.02■■□□□ 1.28
ATL3-202ENST00000535789 SBF2Q86WG5 1849 aa23.02■■□□□ 1.28
ATL3-202ENST00000535789 KRT27Q7Z3Y8 459 aa23■■□□□ 1.27
ATL3-202ENST00000535789 FAM208AQ9UK61 1670 aaKnown RBP23■■□□□ 1.27
ATL3-202ENST00000535789 ANKRD26Q9UPS8 1709 aa22.99■■□□□ 1.27
ATL3-202ENST00000535789 KCNH5Q8NCM2 988 aa22.99■■□□□ 1.27
ATL3-202ENST00000535789 USP35Q9P2H5 1018 aa22.99■■□□□ 1.27
ATL3-202ENST00000535789 BLMP54132 1417 aaPredicted RBP22.99■■□□□ 1.27
ATL3-202ENST00000535789 A0A0G2JS52 829 aa22.97■■□□□ 1.27
ATL3-202ENST00000535789 SLC24A1O60721 1099 aa22.97■■□□□ 1.27
ATL3-202ENST00000535789 MYT1Q01538 1121 aa22.97■■□□□ 1.27
ATL3-202ENST00000535789 FAM182BQ5T319 152 aa22.97■■□□□ 1.27
ATL3-202ENST00000535789 EVA1CP58658 441 aa22.96■■□□□ 1.27
ATL3-202ENST00000535789 BARGINQ6ZT62 677 aa22.96■■□□□ 1.27
ATL3-202ENST00000535789 WDR17Q8IZU2 1322 aa22.94■■□□□ 1.26
ATL3-202ENST00000535789 HSPA5P11021 654 aaKnown RBP22.94■■□□□ 1.26
ATL3-202ENST00000535789 TCP11L2Q8N4U5 519 aa22.94■■□□□ 1.26
ATL3-202ENST00000535789 DISP2A7MBM2 1401 aa22.93■■□□□ 1.26
ATL3-202ENST00000535789 SHANK3Q9BYB0 1731 aa22.91■■□□□ 1.26
ATL3-202ENST00000535789 NSD3Q9BZ95 1437 aa22.91■■□□□ 1.26
ATL3-202ENST00000535789 RREB1Q92766 1687 aa22.9■■□□□ 1.26
ATL3-202ENST00000535789 MAP2P11137 1827 aaKnown RBP22.9■■□□□ 1.26
ATL3-202ENST00000535789 CARD14Q9BXL6 1004 aa22.89■■□□□ 1.25
ATL3-202ENST00000535789 THRAP3Q9Y2W1 955 aaKnown RBP22.89■■□□□ 1.25
ATL3-202ENST00000535789 ERBB3P21860 1342 aa22.88■■□□□ 1.25
ATL3-202ENST00000535789 FBLN1P23142 703 aa22.88■■□□□ 1.25
ATL3-202ENST00000535789 EIF4G2P78344 907 aaKnown RBP eCLIP22.88■■□□□ 1.25
ATL3-202ENST00000535789 CDCA8Q53HL2 280 aa22.88■■□□□ 1.25
ATL3-202ENST00000535789 FYB1O15117 783 aa22.87■■□□□ 1.25
ATL3-202ENST00000535789 TOM1L2Q6ZVM7 507 aa22.87■■□□□ 1.25
ATL3-202ENST00000535789 DEFB132Q7Z7B7 95 aa22.87■■□□□ 1.25
ATL3-202ENST00000535789 CCDC125Q86Z20 511 aa22.87■■□□□ 1.25
ATL3-202ENST00000535789 GGNBP2Q9H3C7 697 aa22.86■■□□□ 1.25
ATL3-202ENST00000535789 NUP188Q5SRE5 1749 aa22.85■■□□□ 1.25
ATL3-202ENST00000535789 MAP3K19Q56UN5 1328 aa22.84■■□□□ 1.25
ATL3-202ENST00000535789 C11orf95C9JLR9 678 aaPredicted RBP22.84■■□□□ 1.25
ATL3-202ENST00000535789 COG3Q96JB2 828 aa22.84■■□□□ 1.25
ATL3-202ENST00000535789 RGPD3A6NKT7 1758 aaPredicted RBP22.84■■□□□ 1.25
ATL3-202ENST00000535789 RGPD4Q7Z3J3 1758 aa22.84■■□□□ 1.25
ATL3-202ENST00000535789 CARD10Q9BWT7 1032 aa22.83■■□□□ 1.25
ATL3-202ENST00000535789 SRCAPQ6ZRS2 3230 aa22.82■■□□□ 1.24
ATL3-202ENST00000535789 TNS2Q63HR2 1409 aa22.82■■□□□ 1.24
ATL3-202ENST00000535789 CCDC7Q96M83 1385 aa22.81■■□□□ 1.24
ATL3-202ENST00000535789 CSB-PGBD3P0DP91 1061 aa22.8■■□□□ 1.24
ATL3-202ENST00000535789 OVOS2A0A0G2JMS6 1433 aa22.8■■□□□ 1.24
ATL3-202ENST00000535789 NHSQ6T4R5 1651 aa22.8■■□□□ 1.24
ATL3-202ENST00000535789 RTL1A6NKG5 1358 aa22.79■■□□□ 1.24
ATL3-202ENST00000535789 ANKRD24Q8TF21 1146 aa22.79■■□□□ 1.24
ATL3-202ENST00000535789 IP6K1Q92551 441 aa22.79■■□□□ 1.24
ATL3-202ENST00000535789 HOXC9P31274 260 aa22.78■■□□□ 1.24
ATL3-202ENST00000535789 RRS1Q15050 365 aaKnown RBP22.78■■□□□ 1.24
ATL3-202ENST00000535789 PDE3BQ13370 1112 aa22.77■■□□□ 1.24
ATL3-202ENST00000535789 POLR3GLQ9BT43 218 aa22.77■■□□□ 1.24
ATL3-202ENST00000535789 TRIM37O94972 964 aa22.76■■□□□ 1.23
ATL3-202ENST00000535789 FAM196AQ6ZSG2 479 aa22.76■■□□□ 1.23
ATL3-202ENST00000535789 DDB1Q16531 1140 aa22.75■■□□□ 1.23
ATL3-202ENST00000535789 DOT1LQ8TEK3 1739 aa22.74■■□□□ 1.23
ATL3-202ENST00000535789 BTAF1O14981 1849 aa22.74■■□□□ 1.23
ATL3-202ENST00000535789 MARCH10Q8NA82 808 aaPredicted RBP22.74■■□□□ 1.23
ATL3-202ENST00000535789 BCL9O00512 1426 aa22.74■■□□□ 1.23
ATL3-202ENST00000535789 MEGF6O75095 1541 aa22.73■■□□□ 1.23
ATL3-202ENST00000535789 EN1Q05925 392 aaPredicted RBP22.73■■□□□ 1.23
ATL3-202ENST00000535789 SF3B2Q13435 895 aaKnown RBP22.73■■□□□ 1.23
ATL3-202ENST00000535789 NLRP2Q9NX02 1062 aa22.73■■□□□ 1.23
ATL3-202ENST00000535789 LTV1Q96GA3 475 aaPredicted RBP22.72■■□□□ 1.23
ATL3-202ENST00000535789 PKD1L3Q7Z443 1732 aa22.71■■□□□ 1.23
ATL3-202ENST00000535789 KAT6BQ8WYB5 2073 aa22.71■■□□□ 1.23
ATL3-202ENST00000535789 BAG6P46379 1132 aa22.71■■□□□ 1.23
ATL3-202ENST00000535789 PTF1AQ7RTS3 328 aa22.71■■□□□ 1.23
ATL3-202ENST00000535789 CDCA7Q9BWT1 371 aaPredicted RBP22.71■■□□□ 1.23
ATL3-202ENST00000535789 KIF7Q2M1P5 1343 aa22.71■■□□□ 1.23
ATL3-202ENST00000535789 FLT4P35916 1363 aa22.7■■□□□ 1.22
ATL3-202ENST00000535789 CGNL1Q0VF96 1302 aa22.69■■□□□ 1.22
ATL3-202ENST00000535789 AMPHP49418 695 aa22.69■■□□□ 1.22
ATL3-202ENST00000535789 PANK3Q9H999 370 aa22.69■■□□□ 1.22
ATL3-202ENST00000535789 EMILIN1Q9Y6C2 1016 aa22.69■■□□□ 1.22
ATL3-202ENST00000535789 INSRP06213 1382 aa22.68■■□□□ 1.22
ATL3-202ENST00000535789 KIF24Q5T7B8 1368 aa22.68■■□□□ 1.22
ATL3-202ENST00000535789 EZH2Q15910 746 aaKnown RBP22.68■■□□□ 1.22
ATL3-202ENST00000535789 CAMKK2Q96RR4 588 aa22.68■■□□□ 1.22
ATL3-202ENST00000535789 IL2RBP14784 551 aa22.67■■□□□ 1.22
ATL3-202ENST00000535789 HSP90AB2PQ58FF8 381 aa22.67■■□□□ 1.22
ATL3-202ENST00000535789 NCAPD2Q15021 1401 aa22.66■■□□□ 1.22
ATL3-202ENST00000535789 TOGARAM1Q9Y4F4 1720 aa22.66■■□□□ 1.22
ATL3-202ENST00000535789 SMG6Q86US8 1419 aaKnown RBP22.65■■□□□ 1.22
ATL3-202ENST00000535789 LRP5O75197 1615 aa22.64■■□□□ 1.22
ATL3-202ENST00000535789 APBA3O96018 575 aa22.64■■□□□ 1.21
ATL3-202ENST00000535789 NBPF6Q5VWK0 638 aa22.64■■□□□ 1.21
ATL3-202ENST00000535789 NBPF4Q96M43 638 aa22.64■■□□□ 1.21
ATL3-202ENST00000535789 EXOC5O00471 708 aa22.63■■□□□ 1.21
ATL3-202ENST00000535789 USHBP1Q8N6Y0 703 aa22.63■■□□□ 1.21
ATL3-202ENST00000535789 PARD3Q8TEW0 1356 aa22.63■■□□□ 1.21
ATL3-202ENST00000535789 ITGB4P16144 1822 aa22.61■■□□□ 1.21
ATL3-202ENST00000535789 NSD2O96028 1365 aa22.61■■□□□ 1.21
ATL3-202ENST00000535789 PAPPAQ13219 1627 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms