RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 MON2Q7Z3U7 1717 aa29.33■■■□□ 2.29
LTBR-205ENST00000535739 WNK3Q9BYP7 1800 aa29.33■■■□□ 2.29
LTBR-205ENST00000535739 NUP188Q5SRE5 1749 aa29.32■■■□□ 2.28
LTBR-205ENST00000535739 SBNO2Q9Y2G9 1366 aa29.32■■■□□ 2.28
LTBR-205ENST00000535739 WDR17Q8IZU2 1322 aa29.32■■■□□ 2.28
LTBR-205ENST00000535739 SBF2Q86WG5 1849 aa29.31■■■□□ 2.28
LTBR-205ENST00000535739 PEAK1Q9H792 1746 aa29.31■■■□□ 2.28
LTBR-205ENST00000535739 DDB1Q16531 1140 aa29.3■■■□□ 2.28
LTBR-205ENST00000535739 NFAT5O94916 1531 aa29.3■■■□□ 2.28
LTBR-205ENST00000535739 OVOS2A0A0G2JMS6 1433 aa29.29■■■□□ 2.28
LTBR-205ENST00000535739 OVOS2A0A0J9YW53 1432 aa29.29■■■□□ 2.28
LTBR-205ENST00000535739 OVOS2Q6IE36 1432 aa29.29■■■□□ 2.28
LTBR-205ENST00000535739 C11orf95C9JLR9 678 aaPredicted RBP29.27■■■□□ 2.28
LTBR-205ENST00000535739 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.27■■■□□ 2.28
LTBR-205ENST00000535739 TONSLQ96HA7 1378 aa29.26■■■□□ 2.28
LTBR-205ENST00000535739 CD163L1Q9NR16 1453 aa29.25■■■□□ 2.27
LTBR-205ENST00000535739 CSB-PGBD3P0DP91 1061 aa29.25■■■□□ 2.27
LTBR-205ENST00000535739 TMC1Q8TDI8 760 aa29.24■■■□□ 2.27
LTBR-205ENST00000535739 CARD10Q9BWT7 1032 aa29.23■■■□□ 2.27
LTBR-205ENST00000535739 NBPF14Q5TI25 921 aa29.22■■■□□ 2.27
LTBR-205ENST00000535739 NME9Q86XW9 330 aa29.22■■■□□ 2.27
LTBR-205ENST00000535739 MARCH10Q8NA82 808 aaPredicted RBP29.22■■■□□ 2.27
LTBR-205ENST00000535739 CDCA7Q9BWT1 371 aaPredicted RBP29.22■■■□□ 2.27
LTBR-205ENST00000535739 USP54Q70EL1 1684 aa29.21■■■□□ 2.27
LTBR-205ENST00000535739 SLC12A5Q9H2X9 1139 aa29.21■■■□□ 2.27
LTBR-205ENST00000535739 USP31Q70CQ4 1352 aa29.21■■■□□ 2.27
LTBR-205ENST00000535739 PTF1AQ7RTS3 328 aa29.2■■■□□ 2.26
LTBR-205ENST00000535739 LTN1O94822 1766 aa29.19■■■□□ 2.26
LTBR-205ENST00000535739 ABCC6O95255 1503 aa29.19■■■□□ 2.26
LTBR-205ENST00000535739 HDGFL2Q7Z4V5 671 aaPredicted RBP29.18■■■□□ 2.26
LTBR-205ENST00000535739 RGPD3A6NKT7 1758 aaPredicted RBP29.18■■■□□ 2.26
LTBR-205ENST00000535739 RGPD4Q7Z3J3 1758 aa29.18■■■□□ 2.26
LTBR-205ENST00000535739 BCL11BQ9C0K0 894 aaPredicted RBP29.16■■■□□ 2.26
LTBR-205ENST00000535739 PLSCR1O15162 318 aa29.15■■■□□ 2.26
LTBR-205ENST00000535739 CCDC7Q96M83 1385 aa29.14■■■□□ 2.26
LTBR-205ENST00000535739 EDC4Q6P2E9 1401 aaKnown RBP29.13■■■□□ 2.25
LTBR-205ENST00000535739 EXOC5O00471 708 aa29.13■■■□□ 2.25
LTBR-205ENST00000535739 A0A1W2PP64 1363 aa29.13■■■□□ 2.25
LTBR-205ENST00000535739 BCL9O00512 1426 aa29.12■■■□□ 2.25
LTBR-205ENST00000535739 TERF2IPQ9NYB0 399 aa29.12■■■□□ 2.25
LTBR-205ENST00000535739 PUS7Q96PZ0 661 aaKnown RBP29.1■■■□□ 2.25
LTBR-205ENST00000535739 ERBB3P21860 1342 aa29.1■■■□□ 2.25
LTBR-205ENST00000535739 TESK2Q96S53 571 aa29.09■■■□□ 2.25
LTBR-205ENST00000535739 NLRP2Q9NX02 1062 aa29.09■■■□□ 2.25
LTBR-205ENST00000535739 ST20-MTHFSA0A0A6YYL1 179 aa29.08■■■□□ 2.25
LTBR-205ENST00000535739 TNS2Q63HR2 1409 aa29.08■■■□□ 2.25
LTBR-205ENST00000535739 PROM2Q8N271 834 aa29.07■■■□□ 2.24
LTBR-205ENST00000535739 ANO8Q9HCE9 1232 aaPredicted RBP29.07■■■□□ 2.24
LTBR-205ENST00000535739 KAT6BQ8WYB5 2073 aa29.06■■■□□ 2.24
LTBR-205ENST00000535739 ANKRD24Q8TF21 1146 aa29.06■■■□□ 2.24
LTBR-205ENST00000535739 SPON1Q9HCB6 807 aa29.04■■■□□ 2.24
LTBR-205ENST00000535739 KCNQ2O43526 872 aa29.02■■■□□ 2.24
LTBR-205ENST00000535739 IL2RBP14784 551 aa29.02■■■□□ 2.24
LTBR-205ENST00000535739 NINLQ9Y2I6 1382 aa29.01■■■□□ 2.23
LTBR-205ENST00000535739 NHSQ6T4R5 1651 aa29■■■□□ 2.23
LTBR-205ENST00000535739 TXNRD1Q16881 649 aa29■■■□□ 2.23
LTBR-205ENST00000535739 CASZ1Q86V15 1759 aa28.99■■■□□ 2.23
LTBR-205ENST00000535739 TRIM26Q12899 539 aaPredicted RBP28.99■■■□□ 2.23
LTBR-205ENST00000535739 ACSBG1Q96GR2 724 aa28.99■■■□□ 2.23
LTBR-205ENST00000535739 IP6K1Q92551 441 aa28.98■■■□□ 2.23
LTBR-205ENST00000535739 PPP1R1BQ9UD71 204 aaPredicted RBP28.98■■■□□ 2.23
LTBR-205ENST00000535739 PDGFDQ9GZP0 370 aaPredicted RBP28.97■■■□□ 2.23
LTBR-205ENST00000535739 LTV1Q96GA3 475 aaPredicted RBP28.96■■■□□ 2.23
LTBR-205ENST00000535739 SLC24A1O60721 1099 aa28.95■■■□□ 2.22
LTBR-205ENST00000535739 COG3Q96JB2 828 aa28.95■■■□□ 2.22
LTBR-205ENST00000535739 FBLN1P23142 703 aa28.94■■■□□ 2.22
LTBR-205ENST00000535739 FAM208AQ9UK61 1670 aaKnown RBP28.93■■■□□ 2.22
LTBR-205ENST00000535739 BTAF1O14981 1849 aa28.93■■■□□ 2.22
LTBR-205ENST00000535739 STK32BQ9NY57 414 aa28.92■■■□□ 2.22
LTBR-205ENST00000535739 MAP3K19Q56UN5 1328 aa28.92■■■□□ 2.22
LTBR-205ENST00000535739 ANKRD36BQ8N2N9 1353 aa28.91■■■□□ 2.22
LTBR-205ENST00000535739 RGPD2P0DJD1 1756 aa28.91■■■□□ 2.22
LTBR-205ENST00000535739 SLC15A2Q16348 729 aa28.9■■■□□ 2.22
LTBR-205ENST00000535739 USP47Q96K76 1375 aa28.89■■■□□ 2.22
LTBR-205ENST00000535739 ZBTB7AO95365 584 aa28.89■■■□□ 2.22
LTBR-205ENST00000535739 HOXC9P31274 260 aa28.89■■■□□ 2.22
LTBR-205ENST00000535739 AMPHP49418 695 aa28.88■■■□□ 2.21
LTBR-205ENST00000535739 TMF1P82094 1093 aa28.88■■■□□ 2.21
LTBR-205ENST00000535739 DDX54Q8TDD1 881 aaKnown RBP28.86■■■□□ 2.21
LTBR-205ENST00000535739 ATF5Q9Y2D1 282 aaPredicted RBP28.85■■■□□ 2.21
LTBR-205ENST00000535739 GGNBP2Q9H3C7 697 aa28.84■■■□□ 2.21
LTBR-205ENST00000535739 FYB1O15117 783 aa28.83■■■□□ 2.21
LTBR-205ENST00000535739 MYOM1P52179 1685 aa28.83■■■□□ 2.21
LTBR-205ENST00000535739 RRS1Q15050 365 aaKnown RBP28.82■■■□□ 2.2
LTBR-205ENST00000535739 PAPPAQ13219 1627 aa28.82■■■□□ 2.2
LTBR-205ENST00000535739 PTGER2P43116 358 aa28.81■■■□□ 2.2
LTBR-205ENST00000535739 KIF20BQ96Q89 1820 aa28.8■■■□□ 2.2
LTBR-205ENST00000535739 SHANK3Q9BYB0 1731 aa28.8■■■□□ 2.2
LTBR-205ENST00000535739 LRRC4BQ9NT99 713 aa28.79■■■□□ 2.2
LTBR-205ENST00000535739 RTL1A6NKG5 1358 aa28.78■■■□□ 2.2
LTBR-205ENST00000535739 MEGF6O75095 1541 aa28.77■■■□□ 2.2
LTBR-205ENST00000535739 DOT1LQ8TEK3 1739 aa28.77■■■□□ 2.2
LTBR-205ENST00000535739 ZNF827Q17R98 1081 aa28.76■■■□□ 2.19
LTBR-205ENST00000535739 MTFR1LQ9H019 292 aa28.76■■■□□ 2.19
LTBR-205ENST00000535739 DCAF8L1A6NGE4 600 aa28.75■■■□□ 2.19
LTBR-205ENST00000535739 CDCA8Q53HL2 280 aa28.75■■■□□ 2.19
LTBR-205ENST00000535739 NBPF6Q5VWK0 638 aa28.75■■■□□ 2.19
LTBR-205ENST00000535739 ZCRB1Q8TBF4 217 aaKnown RBP28.75■■■□□ 2.19
LTBR-205ENST00000535739 NBPF4Q96M43 638 aa28.75■■■□□ 2.19
LTBR-205ENST00000535739 YY1P25490 414 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms