RNA–Protein interactions for RNA: ENST00000535648.5

TNC-210, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 7,508 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-210ENST00000535648 FMNL2Q96PY5 1086 aa11.28□□□□□ -0.6
TNC-210ENST00000535648 FIBPO43427 364 aa11.28□□□□□ -0.6
TNC-210ENST00000535648 EXOSC9Q06265 439 aaKnown RBP11.28□□□□□ -0.6
TNC-210ENST00000535648 PPFIBP1Q86W92 1011 aa11.28□□□□□ -0.6
TNC-210ENST00000535648 ZNF644Q9H582 1327 aaPredicted RBP11.28□□□□□ -0.6
TNC-210ENST00000535648 TATP17735 454 aaPredicted RBP11.28□□□□□ -0.6
TNC-210ENST00000535648 SRCIN1Q9C0H9 1055 aa11.28□□□□□ -0.6
TNC-210ENST00000535648 WDR33Q9C0J8 1336 aaKnown RBP11.27□□□□□ -0.6
TNC-210ENST00000535648 SYNJ2O15056 1496 aa11.27□□□□□ -0.61
TNC-210ENST00000535648 CEBPZQ03701 1054 aaKnown RBP11.27□□□□□ -0.61
TNC-210ENST00000535648 ESCO1Q5FWF5 840 aa11.27□□□□□ -0.61
TNC-210ENST00000535648 TNMDQ9H2S6 317 aa11.27□□□□□ -0.61
TNC-210ENST00000535648 EHBP1L1Q8N3D4 1523 aa11.27□□□□□ -0.61
TNC-210ENST00000535648 RBM42Q9BTD8 480 aaKnown RBP11.27□□□□□ -0.61
TNC-210ENST00000535648 C1orf115Q9H7X2 142 aa11.27□□□□□ -0.61
TNC-210ENST00000535648 SKIDA1Q1XH10 827 aa11.27□□□□□ -0.61
TNC-210ENST00000535648 AXDND1Q5T1B0 1012 aaPredicted RBP11.27□□□□□ -0.61
TNC-210ENST00000535648 ERICH3Q5RHP9 1530 aa11.26□□□□□ -0.61
TNC-210ENST00000535648 RAD54L2Q9Y4B4 1467 aa11.26□□□□□ -0.61
TNC-210ENST00000535648 CBFA2T2O43439 604 aa11.26□□□□□ -0.61
TNC-210ENST00000535648 ANKRD18AQ8IVF6 992 aa11.26□□□□□ -0.61
TNC-210ENST00000535648 FAM177BA6PVY3 158 aa11.26□□□□□ -0.61
TNC-210ENST00000535648 SPC24Q8NBT2 197 aa11.26□□□□□ -0.61
TNC-210ENST00000535648 HFM1A2PYH4 1435 aa11.26□□□□□ -0.61
TNC-210ENST00000535648 DEF6Q9H4E7 631 aa11.26□□□□□ -0.61
TNC-210ENST00000535648 HECW1Q76N89 1606 aa11.26□□□□□ -0.61
TNC-210ENST00000535648 IGF1RP08069 1367 aa11.26□□□□□ -0.61
TNC-210ENST00000535648 SLC4A2P04920 1241 aa11.26□□□□□ -0.61
TNC-210ENST00000535648 HDGFL1Q5TGJ6 251 aa11.26□□□□□ -0.61
TNC-210ENST00000535648 CDKL5O76039 1030 aa11.25□□□□□ -0.61
TNC-210ENST00000535648 CABP4P57796 275 aa11.25□□□□□ -0.61
TNC-210ENST00000535648 KRT85P78386 507 aa11.25□□□□□ -0.61
TNC-210ENST00000535648 SEPT7Q16181 437 aaKnown RBP11.25□□□□□ -0.61
TNC-210ENST00000535648 K7ELQ4 463 aaPredicted RBP11.25□□□□□ -0.61
TNC-210ENST00000535648 NEFHP12036 1026 aa11.25□□□□□ -0.61
TNC-210ENST00000535648 CCDC181Q5TID7 509 aa11.25□□□□□ -0.61
TNC-210ENST00000535648 GRPEL1Q9HAV7 217 aa11.25□□□□□ -0.61
TNC-210ENST00000535648 NOL7Q9UMY1 257 aaKnown RBP11.25□□□□□ -0.61
TNC-210ENST00000535648 ME1P48163 572 aa11.25□□□□□ -0.61
TNC-210ENST00000535648 WDR63Q8IWG1 891 aa11.25□□□□□ -0.61
TNC-210ENST00000535648 PLEKHH2Q8IVE3 1493 aa11.25□□□□□ -0.61
TNC-210ENST00000535648 ZNF692Q9BU19 519 aaPredicted RBP11.25□□□□□ -0.61
TNC-210ENST00000535648 WDR97A6NE52 1622 aa11.24□□□□□ -0.61
TNC-210ENST00000535648 ATP2B2Q01814 1243 aa11.24□□□□□ -0.61
TNC-210ENST00000535648 PAF1Q8N7H5 531 aa11.24□□□□□ -0.61
TNC-210ENST00000535648 PRAM1Q96QH2 718 aa11.24□□□□□ -0.61
TNC-210ENST00000535648 TSPYL1Q9H0U9 437 aa11.24□□□□□ -0.61
TNC-210ENST00000535648 IQCEQ6IPM2 695 aa11.24□□□□□ -0.61
TNC-210ENST00000535648 CDCA7LQ96GN5 454 aa11.24□□□□□ -0.61
TNC-210ENST00000535648 SOGA3Q5TF21 947 aa11.24□□□□□ -0.61
TNC-210ENST00000535648 SPG7Q9UQ90 795 aa11.24□□□□□ -0.61
TNC-210ENST00000535648 STK3Q13188 491 aa11.24□□□□□ -0.61
TNC-210ENST00000535648 EFCAB5A4FU69 1503 aa11.23□□□□□ -0.61
TNC-210ENST00000535648 CCDC57Q2TAC2 916 aa11.23□□□□□ -0.61
TNC-210ENST00000535648 ZMYND15Q9H091 742 aa11.23□□□□□ -0.61
TNC-210ENST00000535648 CFAP45Q9UL16 551 aa11.23□□□□□ -0.61
TNC-210ENST00000535648 CIZ1Q9ULV3 898 aaPredicted RBP11.23□□□□□ -0.61
TNC-210ENST00000535648 AKNAQ7Z591 1439 aa11.23□□□□□ -0.61
TNC-210ENST00000535648 TANGO6Q9C0B7 1094 aa11.23□□□□□ -0.61
TNC-210ENST00000535648 PDIA4P13667 645 aaKnown RBP11.23□□□□□ -0.61
TNC-210ENST00000535648 ERLIN1O75477 346 aa11.22□□□□□ -0.61
TNC-210ENST00000535648 EIF3JO75822 258 aaKnown RBP11.22□□□□□ -0.61
TNC-210ENST00000535648 CFAP70Q5T0N1 1121 aa11.22□□□□□ -0.61
TNC-210ENST00000535648 CDK19Q9BWU1 502 aa11.22□□□□□ -0.61
TNC-210ENST00000535648 LARP1BQ659C4 914 aaKnown RBP11.22□□□□□ -0.61
TNC-210ENST00000535648 IBSPP21815 317 aaPredicted RBP11.22□□□□□ -0.61
TNC-210ENST00000535648 TXNDC2Q86VQ3 553 aa11.22□□□□□ -0.61
TNC-210ENST00000535648 MPHOSPH8Q99549 860 aa11.22□□□□□ -0.61
TNC-210ENST00000535648 SIL1Q9H173 461 aa11.22□□□□□ -0.61
TNC-210ENST00000535648 STRN4Q9NRL3 753 aa11.22□□□□□ -0.61
TNC-210ENST00000535648 CTNNA3Q9UI47 895 aa11.22□□□□□ -0.61
TNC-210ENST00000535648 KIAA0754O94854 1291 aa11.21□□□□□ -0.61
TNC-210ENST00000535648 SULT6B1Q6IMI4 303 aa11.21□□□□□ -0.61
TNC-210ENST00000535648 ZSCAN30Q86W11 494 aa11.21□□□□□ -0.61
TNC-210ENST00000535648 CHD1LQ86WJ1 897 aa11.21□□□□□ -0.61
TNC-210ENST00000535648 ZSCAN31Q96LW9 406 aaPredicted RBP11.21□□□□□ -0.61
TNC-210ENST00000535648 ZHX3Q9H4I2 956 aa11.21□□□□□ -0.61
TNC-210ENST00000535648 KIAA1107Q9UPP5 1409 aa11.21□□□□□ -0.61
TNC-210ENST00000535648 C9orf84Q5VXU9 1444 aa11.21□□□□□ -0.61
TNC-210ENST00000535648 ERBINQ96RT1 1412 aa11.21□□□□□ -0.61
TNC-210ENST00000535648 GOLGA6L7A0A1B0GV03 622 aa11.21□□□□□ -0.61
TNC-210ENST00000535648 KRT32Q14532 448 aa11.21□□□□□ -0.61
TNC-210ENST00000535648 MVPQ14764 893 aaKnown RBP11.21□□□□□ -0.61
TNC-210ENST00000535648 ATF7IPQ6VMQ6 1270 aa11.21□□□□□ -0.61
TNC-210ENST00000535648 TSR2Q969E8 191 aaKnown RBP11.21□□□□□ -0.61
TNC-210ENST00000535648 BLOC1S2Q6QNY1 142 aa11.21□□□□□ -0.62
TNC-210ENST00000535648 NUP133Q8WUM0 1156 aa11.21□□□□□ -0.62
TNC-210ENST00000535648 WASF1Q92558 559 aa11.21□□□□□ -0.62
TNC-210ENST00000535648 MAP4K4O95819 1239 aaPredicted RBP11.2□□□□□ -0.62
TNC-210ENST00000535648 CCDC112Q8NEF3 446 aa11.2□□□□□ -0.62
TNC-210ENST00000535648 BMP2KQ9NSY1 1161 aaPredicted RBP11.2□□□□□ -0.62
TNC-210ENST00000535648 SPATA32Q96LK8 384 aa11.2□□□□□ -0.62
TNC-210ENST00000535648 PDRG1Q9NUG6 133 aa11.2□□□□□ -0.62
TNC-210ENST00000535648 GRIN2BQ13224 1484 aa11.2□□□□□ -0.62
TNC-210ENST00000535648 NUTM2BA6NNL0 878 aaPredicted RBP11.2□□□□□ -0.62
TNC-210ENST00000535648 NUTM2EB1AL46 878 aaPredicted RBP11.2□□□□□ -0.62
TNC-210ENST00000535648 PIP4K2BP78356 416 aa11.2□□□□□ -0.62
TNC-210ENST00000535648 ENOX2Q16206 610 aaKnown RBP11.2□□□□□ -0.62
TNC-210ENST00000535648 AACSQ86V21 672 aa11.2□□□□□ -0.62
TNC-210ENST00000535648 NUTM2AQ8IVF1 878 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms