RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 WDR17Q8IZU2 1322 aa16.58■□□□□ 0.24
KNTC1-208ENST00000535410 BRWD3Q6RI45 1802 aa16.57■□□□□ 0.24
KNTC1-208ENST00000535410 AKAP12Q02952 1782 aa16.57■□□□□ 0.24
KNTC1-208ENST00000535410 NME9Q86XW9 330 aa16.57■□□□□ 0.24
KNTC1-208ENST00000535410 PIK3C2AO00443 1686 aa16.56■□□□□ 0.24
KNTC1-208ENST00000535410 LMO7Q8WWI1 1683 aa16.56■□□□□ 0.24
KNTC1-208ENST00000535410 DEFB132Q7Z7B7 95 aa16.56■□□□□ 0.24
KNTC1-208ENST00000535410 CARD10Q9BWT7 1032 aa16.56■□□□□ 0.24
KNTC1-208ENST00000535410 AXIN2Q9Y2T1 843 aa16.56■□□□□ 0.24
KNTC1-208ENST00000535410 EP400Q96L91 3159 aa16.56■□□□□ 0.24
KNTC1-208ENST00000535410 A0A1W2PP64 1363 aa16.55■□□□□ 0.24
KNTC1-208ENST00000535410 COG3Q96JB2 828 aa16.55■□□□□ 0.24
KNTC1-208ENST00000535410 CD163L1Q9NR16 1453 aa16.54■□□□□ 0.24
KNTC1-208ENST00000535410 THSD7AQ9UPZ6 1657 aa16.54■□□□□ 0.24
KNTC1-208ENST00000535410 DDB1Q16531 1140 aa16.54■□□□□ 0.24
KNTC1-208ENST00000535410 FAM182BQ5T319 152 aa16.54■□□□□ 0.24
KNTC1-208ENST00000535410 ANKRD36BQ8N2N9 1353 aa16.53■□□□□ 0.24
KNTC1-208ENST00000535410 ABCC6O95255 1503 aa16.52■□□□□ 0.24
KNTC1-208ENST00000535410 TRIM37O94972 964 aa16.52■□□□□ 0.24
KNTC1-208ENST00000535410 MON2Q7Z3U7 1717 aa16.52■□□□□ 0.24
KNTC1-208ENST00000535410 CCDC7Q96M83 1385 aa16.51■□□□□ 0.23
KNTC1-208ENST00000535410 EXOC5O00471 708 aa16.51■□□□□ 0.23
KNTC1-208ENST00000535410 APBA3O96018 575 aa16.5■□□□□ 0.23
KNTC1-208ENST00000535410 NLRP2Q9NX02 1062 aa16.5■□□□□ 0.23
KNTC1-208ENST00000535410 NFAT5O94916 1531 aa16.5■□□□□ 0.23
KNTC1-208ENST00000535410 EN1Q05925 392 aaPredicted RBP16.49■□□□□ 0.23
KNTC1-208ENST00000535410 PARD3Q8TEW0 1356 aa16.49■□□□□ 0.23
KNTC1-208ENST00000535410 DISP2A7MBM2 1401 aa16.48■□□□□ 0.23
KNTC1-208ENST00000535410 EIF4G2P78344 907 aaKnown RBP eCLIP16.48■□□□□ 0.23
KNTC1-208ENST00000535410 IP6K1Q92551 441 aa16.48■□□□□ 0.23
KNTC1-208ENST00000535410 ERBB3P21860 1342 aa16.47■□□□□ 0.23
KNTC1-208ENST00000535410 AMPHP49418 695 aa16.47■□□□□ 0.23
KNTC1-208ENST00000535410 ANKRD24Q8TF21 1146 aa16.47■□□□□ 0.23
KNTC1-208ENST00000535410 COL18A1P39060 1754 aa16.46■□□□□ 0.23
KNTC1-208ENST00000535410 OVOS2A0A0G2JMS6 1433 aa16.46■□□□□ 0.23
KNTC1-208ENST00000535410 OVOS2A0A0J9YW53 1432 aa16.46■□□□□ 0.23
KNTC1-208ENST00000535410 OVOS2Q6IE36 1432 aa16.46■□□□□ 0.23
KNTC1-208ENST00000535410 RGPD1P0DJD0 1748 aa16.45■□□□□ 0.22
KNTC1-208ENST00000535410 FYB1O15117 783 aa16.45■□□□□ 0.22
KNTC1-208ENST00000535410 MSH5O43196 834 aa16.45■□□□□ 0.22
KNTC1-208ENST00000535410 CAMKK2Q96RR4 588 aa16.45■□□□□ 0.22
KNTC1-208ENST00000535410 USP54Q70EL1 1684 aa16.44■□□□□ 0.22
KNTC1-208ENST00000535410 IL2RBP14784 551 aa16.44■□□□□ 0.22
KNTC1-208ENST00000535410 NBPF14Q5TI25 921 aa16.44■□□□□ 0.22
KNTC1-208ENST00000535410 EZH2Q15910 746 aaKnown RBP16.43■□□□□ 0.22
KNTC1-208ENST00000535410 BCL11BQ9C0K0 894 aaPredicted RBP16.43■□□□□ 0.22
KNTC1-208ENST00000535410 PARP4Q9UKK3 1724 aaKnown RBP16.42■□□□□ 0.22
KNTC1-208ENST00000535410 MARCH10Q8NA82 808 aaPredicted RBP16.42■□□□□ 0.22
KNTC1-208ENST00000535410 GGNBP2Q9H3C7 697 aa16.42■□□□□ 0.22
KNTC1-208ENST00000535410 MAP3K19Q56UN5 1328 aa16.42■□□□□ 0.22
KNTC1-208ENST00000535410 PLSCR1O15162 318 aa16.41■□□□□ 0.22
KNTC1-208ENST00000535410 BCL9O00512 1426 aa16.41■□□□□ 0.22
KNTC1-208ENST00000535410 HOXC9P31274 260 aa16.4■□□□□ 0.22
KNTC1-208ENST00000535410 LTV1Q96GA3 475 aaPredicted RBP16.4■□□□□ 0.22
KNTC1-208ENST00000535410 POLR3GLQ9BT43 218 aa16.4■□□□□ 0.22
KNTC1-208ENST00000535410 CGNL1Q0VF96 1302 aa16.4■□□□□ 0.22
KNTC1-208ENST00000535410 RTL1A6NKG5 1358 aa16.39■□□□□ 0.21
KNTC1-208ENST00000535410 KIF24Q5T7B8 1368 aa16.38■□□□□ 0.21
KNTC1-208ENST00000535410 HSPA5P11021 654 aaKnown RBP16.38■□□□□ 0.21
KNTC1-208ENST00000535410 CARD14Q9BXL6 1004 aa16.38■□□□□ 0.21
KNTC1-208ENST00000535410 SMG6Q86US8 1419 aaKnown RBP16.37■□□□□ 0.21
KNTC1-208ENST00000535410 PSDA5PKW4 1024 aaPredicted RBP16.37■□□□□ 0.21
KNTC1-208ENST00000535410 R3HDM1Q15032 1099 aaKnown RBP16.36■□□□□ 0.21
KNTC1-208ENST00000535410 RRS1Q15050 365 aaKnown RBP16.36■□□□□ 0.21
KNTC1-208ENST00000535410 RGPD5Q99666 1765 aa16.36■□□□□ 0.21
KNTC1-208ENST00000535410 TNS2Q63HR2 1409 aa16.36■□□□□ 0.21
KNTC1-208ENST00000535410 NSD3Q9BZ95 1437 aa16.36■□□□□ 0.21
KNTC1-208ENST00000535410 LRRC37A3O60309 1634 aa16.35■□□□□ 0.21
KNTC1-208ENST00000535410 LTN1O94822 1766 aa16.35■□□□□ 0.21
KNTC1-208ENST00000535410 FBLN1P23142 703 aa16.34■□□□□ 0.21
KNTC1-208ENST00000535410 TNS1Q9HBL0 1735 aaKnown RBP16.33■□□□□ 0.21
KNTC1-208ENST00000535410 RAPGEF4Q8WZA2 1011 aa16.33■□□□□ 0.2
KNTC1-208ENST00000535410 INSRP06213 1382 aa16.33■□□□□ 0.2
KNTC1-208ENST00000535410 FLT4P35916 1363 aa16.33■□□□□ 0.2
KNTC1-208ENST00000535410 ZCRB1Q8TBF4 217 aaKnown RBP16.32■□□□□ 0.2
KNTC1-208ENST00000535410 DDX54Q8TDD1 881 aaKnown RBP16.32■□□□□ 0.2
KNTC1-208ENST00000535410 PPM1GO15355 546 aaPredicted RBP16.31■□□□□ 0.2
KNTC1-208ENST00000535410 PANK3Q9H999 370 aa16.31■□□□□ 0.2
KNTC1-208ENST00000535410 PEAK1Q9H792 1746 aa16.31■□□□□ 0.2
KNTC1-208ENST00000535410 TATP17735 454 aaPredicted RBP16.3■□□□□ 0.2
KNTC1-208ENST00000535410 HSP90AB2PQ58FF8 381 aa16.3■□□□□ 0.2
KNTC1-208ENST00000535410 NBPF6Q5VWK0 638 aa16.3■□□□□ 0.2
KNTC1-208ENST00000535410 NBPF4Q96M43 638 aa16.3■□□□□ 0.2
KNTC1-208ENST00000535410 FAM208AQ9UK61 1670 aaKnown RBP16.3■□□□□ 0.2
KNTC1-208ENST00000535410 WNK3Q9BYP7 1800 aa16.29■□□□□ 0.2
KNTC1-208ENST00000535410 HMGB2P26583 209 aaKnown RBP16.29■□□□□ 0.2
KNTC1-208ENST00000535410 KCNQ2O43526 872 aa16.28■□□□□ 0.2
KNTC1-208ENST00000535410 TXNRD1Q16881 649 aa16.28■□□□□ 0.2
KNTC1-208ENST00000535410 ACSBG1Q96GR2 724 aa16.28■□□□□ 0.2
KNTC1-208ENST00000535410 KNSTRNQ9Y448 316 aa16.28■□□□□ 0.2
KNTC1-208ENST00000535410 WASHC2AQ641Q2 1341 aa16.27■□□□□ 0.2
KNTC1-208ENST00000535410 PTF1AQ7RTS3 328 aa16.27■□□□□ 0.2
KNTC1-208ENST00000535410 STK32BQ9NY57 414 aa16.27■□□□□ 0.2
KNTC1-208ENST00000535410 SRCAPQ6ZRS2 3230 aa16.27■□□□□ 0.19
KNTC1-208ENST00000535410 NSD2O96028 1365 aa16.26■□□□□ 0.19
KNTC1-208ENST00000535410 EMILIN1Q9Y6C2 1016 aa16.26■□□□□ 0.19
KNTC1-208ENST00000535410 KIF20BQ96Q89 1820 aa16.25■□□□□ 0.19
KNTC1-208ENST00000535410 SPON1Q9HCB6 807 aa16.25■□□□□ 0.19
KNTC1-208ENST00000535410 MYOM1P52179 1685 aa16.24■□□□□ 0.19
KNTC1-208ENST00000535410 MORC1Q86VD1 984 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms