RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 SOX12O15370 315 aa19.24■□□□□ 0.67
TMEM258-203ENST00000535297 LARP1Q6PKG0 1096 aaKnown RBP19.24■□□□□ 0.67
TMEM258-203ENST00000535297 KRT27Q7Z3Y8 459 aa19.24■□□□□ 0.67
TMEM258-203ENST00000535297 BARGINQ6ZT62 677 aa19.23■□□□□ 0.67
TMEM258-203ENST00000535297 RGPD5Q99666 1765 aa19.23■□□□□ 0.67
TMEM258-203ENST00000535297 HSPA5P11021 654 aaKnown RBP19.22■□□□□ 0.67
TMEM258-203ENST00000535297 THRAP3Q9Y2W1 955 aaKnown RBP19.22■□□□□ 0.67
TMEM258-203ENST00000535297 EP400Q96L91 3159 aa19.22■□□□□ 0.67
TMEM258-203ENST00000535297 KIF20BQ96Q89 1820 aa19.21■□□□□ 0.67
TMEM258-203ENST00000535297 CCDC125Q86Z20 511 aa19.21■□□□□ 0.67
TMEM258-203ENST00000535297 TCP11L2Q8N4U5 519 aa19.21■□□□□ 0.67
TMEM258-203ENST00000535297 WDR17Q8IZU2 1322 aa19.21■□□□□ 0.67
TMEM258-203ENST00000535297 WNK3Q9BYP7 1800 aa19.21■□□□□ 0.67
TMEM258-203ENST00000535297 PARP4Q9UKK3 1724 aaKnown RBP19.2■□□□□ 0.66
TMEM258-203ENST00000535297 USP35Q9P2H5 1018 aa19.2■□□□□ 0.66
TMEM258-203ENST00000535297 AXIN2Q9Y2T1 843 aa19.2■□□□□ 0.66
TMEM258-203ENST00000535297 BLMP54132 1417 aaPredicted RBP19.19■□□□□ 0.66
TMEM258-203ENST00000535297 COG3Q96JB2 828 aa19.19■□□□□ 0.66
TMEM258-203ENST00000535297 TOM1L2Q6ZVM7 507 aa19.17■□□□□ 0.66
TMEM258-203ENST00000535297 NSD3Q9BZ95 1437 aa19.16■□□□□ 0.66
TMEM258-203ENST00000535297 LRRC37A3O60309 1634 aa19.14■□□□□ 0.66
TMEM258-203ENST00000535297 RGPD1P0DJD0 1748 aa19.14■□□□□ 0.66
TMEM258-203ENST00000535297 FYB1O15117 783 aa19.14■□□□□ 0.65
TMEM258-203ENST00000535297 CSB-PGBD3P0DP91 1061 aa19.14■□□□□ 0.65
TMEM258-203ENST00000535297 CARD10Q9BWT7 1032 aa19.14■□□□□ 0.65
TMEM258-203ENST00000535297 ERBB3P21860 1342 aa19.14■□□□□ 0.65
TMEM258-203ENST00000535297 FAM208AQ9UK61 1670 aaKnown RBP19.14■□□□□ 0.65
TMEM258-203ENST00000535297 CCDC7Q96M83 1385 aa19.13■□□□□ 0.65
TMEM258-203ENST00000535297 POLR3GLQ9BT43 218 aa19.12■□□□□ 0.65
TMEM258-203ENST00000535297 CARD14Q9BXL6 1004 aa19.12■□□□□ 0.65
TMEM258-203ENST00000535297 GGNBP2Q9H3C7 697 aa19.12■□□□□ 0.65
TMEM258-203ENST00000535297 DISP2A7MBM2 1401 aa19.11■□□□□ 0.65
TMEM258-203ENST00000535297 RTL1A6NKG5 1358 aa19.11■□□□□ 0.65
TMEM258-203ENST00000535297 PDE3BQ13370 1112 aa19.11■□□□□ 0.65
TMEM258-203ENST00000535297 SF3B2Q13435 895 aaKnown RBP19.11■□□□□ 0.65
TMEM258-203ENST00000535297 CDCA7Q9BWT1 371 aaPredicted RBP19.11■□□□□ 0.65
TMEM258-203ENST00000535297 MAP3K19Q56UN5 1328 aa19.1■□□□□ 0.65
TMEM258-203ENST00000535297 IP6K1Q92551 441 aa19.1■□□□□ 0.65
TMEM258-203ENST00000535297 TNS1Q9HBL0 1735 aaKnown RBP19.1■□□□□ 0.65
TMEM258-203ENST00000535297 FAM182BQ5T319 152 aa19.09■□□□□ 0.65
TMEM258-203ENST00000535297 FAM196AQ6ZSG2 479 aa19.09■□□□□ 0.65
TMEM258-203ENST00000535297 ANKRD24Q8TF21 1146 aa19.09■□□□□ 0.65
TMEM258-203ENST00000535297 ANKRD26Q9UPS8 1709 aa19.08■□□□□ 0.65
TMEM258-203ENST00000535297 CGNL1Q0VF96 1302 aa19.08■□□□□ 0.65
TMEM258-203ENST00000535297 PEAK1Q9H792 1746 aa19.08■□□□□ 0.64
TMEM258-203ENST00000535297 C11orf95C9JLR9 678 aaPredicted RBP19.06■□□□□ 0.64
TMEM258-203ENST00000535297 HOXC9P31274 260 aa19.06■□□□□ 0.64
TMEM258-203ENST00000535297 AMPHP49418 695 aa19.06■□□□□ 0.64
TMEM258-203ENST00000535297 DDB1Q16531 1140 aa19.06■□□□□ 0.64
TMEM258-203ENST00000535297 NLRP2Q9NX02 1062 aa19.06■□□□□ 0.64
TMEM258-203ENST00000535297 OVOS2A0A0G2JMS6 1433 aa19.06■□□□□ 0.64
TMEM258-203ENST00000535297 KIF24Q5T7B8 1368 aa19.06■□□□□ 0.64
TMEM258-203ENST00000535297 TNS2Q63HR2 1409 aa19.05■□□□□ 0.64
TMEM258-203ENST00000535297 FBLN1P23142 703 aa19.04■□□□□ 0.64
TMEM258-203ENST00000535297 BAG6P46379 1132 aa19.04■□□□□ 0.64
TMEM258-203ENST00000535297 RRS1Q15050 365 aaKnown RBP19.04■□□□□ 0.64
TMEM258-203ENST00000535297 DEFB132Q7Z7B7 95 aa19.03■□□□□ 0.64
TMEM258-203ENST00000535297 FLT4P35916 1363 aa19.03■□□□□ 0.64
TMEM258-203ENST00000535297 PANK3Q9H999 370 aa19.02■□□□□ 0.64
TMEM258-203ENST00000535297 NSD2O96028 1365 aa19.02■□□□□ 0.64
TMEM258-203ENST00000535297 KIF7Q2M1P5 1343 aa19.01■□□□□ 0.63
TMEM258-203ENST00000535297 BCL9O00512 1426 aa19.01■□□□□ 0.63
TMEM258-203ENST00000535297 SMG6Q86US8 1419 aaKnown RBP19.01■□□□□ 0.63
TMEM258-203ENST00000535297 SBF2Q86WG5 1849 aa19.01■□□□□ 0.63
TMEM258-203ENST00000535297 RGPD2P0DJD1 1756 aa19.01■□□□□ 0.63
TMEM258-203ENST00000535297 TRIM37O94972 964 aa19■□□□□ 0.63
TMEM258-203ENST00000535297 IL2RBP14784 551 aa19■□□□□ 0.63
TMEM258-203ENST00000535297 LTV1Q96GA3 475 aaPredicted RBP19■□□□□ 0.63
TMEM258-203ENST00000535297 INSRP06213 1382 aa19■□□□□ 0.63
TMEM258-203ENST00000535297 EXOC5O00471 708 aa18.99■□□□□ 0.63
TMEM258-203ENST00000535297 MAP2P11137 1827 aaKnown RBP18.98■□□□□ 0.63
TMEM258-203ENST00000535297 MARCH10Q8NA82 808 aaPredicted RBP18.98■□□□□ 0.63
TMEM258-203ENST00000535297 PARD3Q8TEW0 1356 aa18.96■□□□□ 0.63
TMEM258-203ENST00000535297 EMILIN1Q9Y6C2 1016 aa18.96■□□□□ 0.63
TMEM258-203ENST00000535297 RGPD3A6NKT7 1758 aaPredicted RBP18.96■□□□□ 0.63
TMEM258-203ENST00000535297 RGPD4Q7Z3J3 1758 aa18.96■□□□□ 0.63
TMEM258-203ENST00000535297 EN1Q05925 392 aaPredicted RBP18.95■□□□□ 0.62
TMEM258-203ENST00000535297 RREB1Q92766 1687 aa18.95■□□□□ 0.62
TMEM258-203ENST00000535297 APBA3O96018 575 aa18.94■□□□□ 0.62
TMEM258-203ENST00000535297 HSP90AB2PQ58FF8 381 aa18.94■□□□□ 0.62
TMEM258-203ENST00000535297 KNSTRNQ9Y448 316 aa18.94■□□□□ 0.62
TMEM258-203ENST00000535297 WASHC2AQ641Q2 1341 aa18.93■□□□□ 0.62
TMEM258-203ENST00000535297 NHSQ6T4R5 1651 aa18.92■□□□□ 0.62
TMEM258-203ENST00000535297 MEGF6O75095 1541 aa18.92■□□□□ 0.62
TMEM258-203ENST00000535297 NBPF6Q5VWK0 638 aa18.92■□□□□ 0.62
TMEM258-203ENST00000535297 NBPF4Q96M43 638 aa18.92■□□□□ 0.62
TMEM258-203ENST00000535297 CAMKK2Q96RR4 588 aa18.92■□□□□ 0.62
TMEM258-203ENST00000535297 SHANK3Q9BYB0 1731 aa18.91■□□□□ 0.62
TMEM258-203ENST00000535297 BCL11BQ9C0K0 894 aaPredicted RBP18.91■□□□□ 0.62
TMEM258-203ENST00000535297 POLKQ9UBT6 870 aa18.91■□□□□ 0.62
TMEM258-203ENST00000535297 NCAPD2Q15021 1401 aa18.91■□□□□ 0.62
TMEM258-203ENST00000535297 PPM1GO15355 546 aaPredicted RBP18.9■□□□□ 0.62
TMEM258-203ENST00000535297 EZH2Q15910 746 aaKnown RBP18.9■□□□□ 0.62
TMEM258-203ENST00000535297 NUP188Q5SRE5 1749 aa18.9■□□□□ 0.62
TMEM258-203ENST00000535297 TNNT2P45379 298 aaPredicted RBP18.88■□□□□ 0.61
TMEM258-203ENST00000535297 AMER1Q5JTC6 1135 aaPredicted RBP18.88■□□□□ 0.61
TMEM258-203ENST00000535297 MORC1Q86VD1 984 aa18.88■□□□□ 0.61
TMEM258-203ENST00000535297 USHBP1Q8N6Y0 703 aa18.88■□□□□ 0.61
TMEM258-203ENST00000535297 RAPGEF4Q8WZA2 1011 aa18.87■□□□□ 0.61
TMEM258-203ENST00000535297 PLSCR1O15162 318 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms