RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 RBM46Q8TBY0 533 aaKnown RBP11.62□□□□□ -0.55
CPSF7-214ENST00000535222 LRRC37A3O60309 1634 aa11.61□□□□□ -0.55
CPSF7-214ENST00000535222 ARHGEF28Q8N1W1 1705 aaKnown RBP11.61□□□□□ -0.55
CPSF7-214ENST00000535222 KLHL34Q8N239 644 aa11.61□□□□□ -0.55
CPSF7-214ENST00000535222 QSER1Q2KHR3 1735 aa11.6□□□□□ -0.55
CPSF7-214ENST00000535222 COL5A2P05997 1499 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-214ENST00000535222 BRD4O60885 1362 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-214ENST00000535222 ANKRD30BQ9BXX2 1392 aa11.6□□□□□ -0.55
CPSF7-214ENST00000535222 HTRA3P83110 453 aa11.6□□□□□ -0.55
CPSF7-214ENST00000535222 CDCA7Q9BWT1 371 aaPredicted RBP11.6□□□□□ -0.55
CPSF7-214ENST00000535222 PNPLA7Q6ZV29 1317 aa11.6□□□□□ -0.55
CPSF7-214ENST00000535222 FSTL1Q12841 308 aa11.59□□□□□ -0.55
CPSF7-214ENST00000535222 LRRC4BQ9NT99 713 aa11.59□□□□□ -0.55
CPSF7-214ENST00000535222 CD2APQ9Y5K6 639 aa11.59□□□□□ -0.55
CPSF7-214ENST00000535222 TULP4Q9NRJ4 1543 aa11.59□□□□□ -0.55
CPSF7-214ENST00000535222 TNS2Q63HR2 1409 aa11.59□□□□□ -0.55
CPSF7-214ENST00000535222 PRR36Q9H6K5 1346 aa11.59□□□□□ -0.55
CPSF7-214ENST00000535222 HSPA1AP0DMV8 641 aaKnown RBP11.58□□□□□ -0.56
CPSF7-214ENST00000535222 HSPA1BP0DMV9 641 aaKnown RBP11.58□□□□□ -0.56
CPSF7-214ENST00000535222 TOPAZ1Q8N9V7 1692 aa11.58□□□□□ -0.56
CPSF7-214ENST00000535222 PAK3O75914 559 aaPredicted RBP11.57□□□□□ -0.56
CPSF7-214ENST00000535222 PIK3C2GO75747 1445 aa11.56□□□□□ -0.56
CPSF7-214ENST00000535222 FAM50AQ14320 339 aaKnown RBP11.56□□□□□ -0.56
CPSF7-214ENST00000535222 USP19O94966 1318 aa11.56□□□□□ -0.56
CPSF7-214ENST00000535222 NGDNQ8NEJ9 315 aaKnown RBP11.55□□□□□ -0.56
CPSF7-214ENST00000535222 PRAM1Q96QH2 718 aa11.55□□□□□ -0.56
CPSF7-214ENST00000535222 EIF3AQ14152 1382 aaKnown RBP11.54□□□□□ -0.56
CPSF7-214ENST00000535222 RGS19P49795 217 aa11.54□□□□□ -0.56
CPSF7-214ENST00000535222 FAM161AQ3B820 660 aa11.54□□□□□ -0.56
CPSF7-214ENST00000535222 SLC27A3Q5K4L6 730 aa11.54□□□□□ -0.56
CPSF7-214ENST00000535222 C14orf93Q9H972 538 aaKnown RBP11.54□□□□□ -0.56
CPSF7-214ENST00000535222 GCP02774 474 aa11.52□□□□□ -0.57
CPSF7-214ENST00000535222 CICQ96RK0 1608 aaPredicted RBP11.52□□□□□ -0.57
CPSF7-214ENST00000535222 AKAP12Q02952 1782 aa11.51□□□□□ -0.57
CPSF7-214ENST00000535222 EXOC5O00471 708 aa11.51□□□□□ -0.57
CPSF7-214ENST00000535222 NMRK2Q9NPI5 230 aa11.51□□□□□ -0.57
CPSF7-214ENST00000535222 PRDM10Q9NQV6 1147 aa11.51□□□□□ -0.57
CPSF7-214ENST00000535222 NHSQ6T4R5 1651 aa11.51□□□□□ -0.57
CPSF7-214ENST00000535222 WASLO00401 505 aaPredicted RBP11.5□□□□□ -0.57
CPSF7-214ENST00000535222 C10orf71Q711Q0 1435 aa11.5□□□□□ -0.57
CPSF7-214ENST00000535222 SAFB2Q14151 953 aaKnown RBP eCLIP11.49□□□□□ -0.57
CPSF7-214ENST00000535222 NUTM2GQ5VZR2 741 aa11.49□□□□□ -0.57
CPSF7-214ENST00000535222 TFCP2L1Q9NZI6 479 aa11.49□□□□□ -0.57
CPSF7-214ENST00000535222 WDR17Q8IZU2 1322 aa11.49□□□□□ -0.57
CPSF7-214ENST00000535222 POLR3AO14802 1390 aaPredicted RBP11.49□□□□□ -0.57
CPSF7-214ENST00000535222 USP6P35125 1406 aa11.49□□□□□ -0.57
CPSF7-214ENST00000535222 SPATA31E1Q6ZUB1 1445 aa11.49□□□□□ -0.57
CPSF7-214ENST00000535222 TOM1L2Q6ZVM7 507 aa11.48□□□□□ -0.57
CPSF7-214ENST00000535222 CARD10Q9BWT7 1032 aa11.48□□□□□ -0.57
CPSF7-214ENST00000535222 WNK3Q9BYP7 1800 aa11.48□□□□□ -0.57
CPSF7-214ENST00000535222 PDE4DIPQ5VU43 2346 aa11.47□□□□□ -0.57
CPSF7-214ENST00000535222 MLLT1Q03111 559 aaPredicted RBP11.46□□□□□ -0.57
CPSF7-214ENST00000535222 NLRP13Q86W25 1043 aa11.46□□□□□ -0.57
CPSF7-214ENST00000535222 ABTB2Q8N961 1025 aa11.46□□□□□ -0.57
CPSF7-214ENST00000535222 HIRIP3Q9BW71 556 aaPredicted RBP11.46□□□□□ -0.57
CPSF7-214ENST00000535222 POGKQ9P215 609 aa11.46□□□□□ -0.57
CPSF7-214ENST00000535222 TUBGCP6Q96RT7 1819 aa11.46□□□□□ -0.58
CPSF7-214ENST00000535222 TNRC18O15417 2968 aaPredicted RBP11.45□□□□□ -0.58
CPSF7-214ENST00000535222 IGSF1Q8N6C5 1336 aa11.45□□□□□ -0.58
CPSF7-214ENST00000535222 COL23A1Q86Y22 540 aaPredicted RBP11.45□□□□□ -0.58
CPSF7-214ENST00000535222 AXIN2Q9Y2T1 843 aa11.45□□□□□ -0.58
CPSF7-214ENST00000535222 BTAF1O14981 1849 aa11.44□□□□□ -0.58
CPSF7-214ENST00000535222 COL18A1P39060 1754 aa11.44□□□□□ -0.58
CPSF7-214ENST00000535222 PLEKHG3A1L390 1219 aa11.44□□□□□ -0.58
CPSF7-214ENST00000535222 APLP2Q06481 763 aa11.44□□□□□ -0.58
CPSF7-214ENST00000535222 ACSBG1Q96GR2 724 aa11.44□□□□□ -0.58
CPSF7-214ENST00000535222 KIAA1210Q9ULL0 1709 aa11.43□□□□□ -0.58
CPSF7-214ENST00000535222 TRPM1Q7Z4N2 1603 aa11.43□□□□□ -0.58
CPSF7-214ENST00000535222 CFAP70Q5T0N1 1121 aa11.43□□□□□ -0.58
CPSF7-214ENST00000535222 C16orf71Q8IYS4 520 aaPredicted RBP11.43□□□□□ -0.58
CPSF7-214ENST00000535222 SMC1BQ8NDV3 1235 aa11.43□□□□□ -0.58
CPSF7-214ENST00000535222 NUDT16Q96DE0 195 aaKnown RBP11.43□□□□□ -0.58
CPSF7-214ENST00000535222 PXDNLA1KZ92 1463 aa11.43□□□□□ -0.58
CPSF7-214ENST00000535222 ABHD8Q96I13 439 aa11.42□□□□□ -0.58
CPSF7-214ENST00000535222 ACEP12821 1306 aa11.41□□□□□ -0.58
CPSF7-214ENST00000535222 ABCC6O95255 1503 aa11.41□□□□□ -0.58
CPSF7-214ENST00000535222 FOXN1O15353 648 aa11.41□□□□□ -0.58
CPSF7-214ENST00000535222 MINK1Q8N4C8 1332 aaPredicted RBP11.4□□□□□ -0.58
CPSF7-214ENST00000535222 RGL3Q3MIN7 710 aa11.4□□□□□ -0.58
CPSF7-214ENST00000535222 CCDC7Q96M83 1385 aa11.4□□□□□ -0.59
CPSF7-214ENST00000535222 SLIT3O75094 1523 aa11.39□□□□□ -0.59
CPSF7-214ENST00000535222 ITSN1Q15811 1721 aa11.38□□□□□ -0.59
CPSF7-214ENST00000535222 MSL1Q68DK7 614 aa11.38□□□□□ -0.59
CPSF7-214ENST00000535222 PLEKHG2Q9H7P9 1386 aa11.38□□□□□ -0.59
CPSF7-214ENST00000535222 ADGRB1O14514 1584 aa11.37□□□□□ -0.59
CPSF7-214ENST00000535222 PPIP5K1Q6PFW1 1433 aa11.37□□□□□ -0.59
CPSF7-214ENST00000535222 ARHGEF25Q86VW2 580 aa11.37□□□□□ -0.59
CPSF7-214ENST00000535222 FLAD1Q8NFF5 587 aa11.37□□□□□ -0.59
CPSF7-214ENST00000535222 CCDC61Q9Y6R9 512 aa11.37□□□□□ -0.59
CPSF7-214ENST00000535222 KDM2BQ8NHM5 1336 aa11.36□□□□□ -0.59
CPSF7-214ENST00000535222 CTCFP49711 727 aaPredicted RBP11.36□□□□□ -0.59
CPSF7-214ENST00000535222 KCNQ4P56696 695 aa11.36□□□□□ -0.59
CPSF7-214ENST00000535222 KAT6BQ8WYB5 2073 aa11.36□□□□□ -0.59
CPSF7-214ENST00000535222 LY75O60449 1722 aa11.35□□□□□ -0.59
CPSF7-214ENST00000535222 RRAGCQ9HB90 399 aa11.35□□□□□ -0.59
CPSF7-214ENST00000535222 MSH5O43196 834 aa11.34□□□□□ -0.59
CPSF7-214ENST00000535222 TRAK1Q9UPV9 953 aa11.34□□□□□ -0.59
CPSF7-214ENST00000535222 CPSF1Q10570 1443 aaKnown RBP11.34□□□□□ -0.59
CPSF7-214ENST00000535222 HMGB2P26583 209 aaKnown RBP11.33□□□□□ -0.6
CPSF7-214ENST00000535222 C9orf131Q5VYM1 1079 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms