RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 RTL1A6NKG5 1358 aa28.11■■■□□ 2.09
CHFR-209ENST00000535181 KIF24Q5T7B8 1368 aa28.11■■■□□ 2.09
CHFR-209ENST00000535181 ZBTB7CA1YPR0 619 aa28.11■■■□□ 2.09
CHFR-209ENST00000535181 RXRBP28702 533 aa28.11■■■□□ 2.09
CHFR-209ENST00000535181 MAP3K19Q56UN5 1328 aa28.11■■■□□ 2.09
CHFR-209ENST00000535181 BLMP54132 1417 aaPredicted RBP28.1■■■□□ 2.09
CHFR-209ENST00000535181 GJD4Q96KN9 370 aaPredicted RBP28.1■■■□□ 2.09
CHFR-209ENST00000535181 AXIN2Q9Y2T1 843 aa28.1■■■□□ 2.09
CHFR-209ENST00000535181 GLI3P10071 1580 aa28.1■■■□□ 2.09
CHFR-209ENST00000535181 RGPD5Q99666 1765 aa28.09■■■□□ 2.09
CHFR-209ENST00000535181 EVA1CP58658 441 aa28.07■■■□□ 2.08
CHFR-209ENST00000535181 IP6K1Q92551 441 aa28.07■■■□□ 2.08
CHFR-209ENST00000535181 SPATA31A5Q5VU36 1347 aa28.07■■■□□ 2.08
CHFR-209ENST00000535181 SPATA31A7Q8IWB4 1347 aa28.07■■■□□ 2.08
CHFR-209ENST00000535181 FBLN1P23142 703 aa28.06■■■□□ 2.08
CHFR-209ENST00000535181 STRN4Q9NRL3 753 aa28.06■■■□□ 2.08
CHFR-209ENST00000535181 RRS1Q15050 365 aaKnown RBP28.05■■■□□ 2.08
CHFR-209ENST00000535181 WDR17Q8IZU2 1322 aa28.05■■■□□ 2.08
CHFR-209ENST00000535181 MAP2P11137 1827 aaKnown RBP28.04■■■□□ 2.08
CHFR-209ENST00000535181 CRB1P82279 1406 aa28.04■■■□□ 2.08
CHFR-209ENST00000535181 MORC1Q86VD1 984 aa28.04■■■□□ 2.08
CHFR-209ENST00000535181 PEAK1Q9H792 1746 aa28.04■■■□□ 2.08
CHFR-209ENST00000535181 FLT4P35916 1363 aa28.03■■■□□ 2.08
CHFR-209ENST00000535181 ERBB3P21860 1342 aa28.03■■■□□ 2.08
CHFR-209ENST00000535181 SPATA31A1Q5TZJ5 1347 aa28.03■■■□□ 2.08
CHFR-209ENST00000535181 HOXC9P31274 260 aa28.03■■■□□ 2.08
CHFR-209ENST00000535181 AMPHP49418 695 aa28.03■■■□□ 2.08
CHFR-209ENST00000535181 SMG6Q86US8 1419 aaKnown RBP28.02■■■□□ 2.08
CHFR-209ENST00000535181 LARP1Q6PKG0 1096 aaKnown RBP28.02■■■□□ 2.08
CHFR-209ENST00000535181 CCDC9Q9Y3X0 531 aaKnown RBP28.02■■■□□ 2.08
CHFR-209ENST00000535181 FAM208AQ9UK61 1670 aaKnown RBP28.01■■■□□ 2.07
CHFR-209ENST00000535181 ILDR2Q71H61 639 aa28.01■■■□□ 2.07
CHFR-209ENST00000535181 ZNF316A6NFI3 1004 aaPredicted RBP28■■■□□ 2.07
CHFR-209ENST00000535181 RGS12O14924 1447 aa28■■■□□ 2.07
CHFR-209ENST00000535181 INSRP06213 1382 aa27.99■■■□□ 2.07
CHFR-209ENST00000535181 ONECUT3O60422 494 aaPredicted RBP27.99■■■□□ 2.07
CHFR-209ENST00000535181 POLKQ9UBT6 870 aa27.99■■■□□ 2.07
CHFR-209ENST00000535181 CC2D1BQ5T0F9 858 aaKnown RBP27.98■■■□□ 2.07
CHFR-209ENST00000535181 THRAP3Q9Y2W1 955 aaKnown RBP27.98■■■□□ 2.07
CHFR-209ENST00000535181 EMILIN1Q9Y6C2 1016 aa27.98■■■□□ 2.07
CHFR-209ENST00000535181 ANKRD24Q8TF21 1146 aa27.97■■■□□ 2.07
CHFR-209ENST00000535181 TNNT2P45379 298 aaPredicted RBP27.96■■■□□ 2.07
CHFR-209ENST00000535181 DDX10Q13206 875 aaKnown RBP27.96■■■□□ 2.07
CHFR-209ENST00000535181 TOM1L2Q6ZVM7 507 aa27.96■■■□□ 2.07
CHFR-209ENST00000535181 THSD7AQ9UPZ6 1657 aa27.96■■■□□ 2.07
CHFR-209ENST00000535181 CSB-PGBD3P0DP91 1061 aa27.95■■■□□ 2.06
CHFR-209ENST00000535181 BARGINQ6ZT62 677 aa27.95■■■□□ 2.06
CHFR-209ENST00000535181 TCP11L2Q8N4U5 519 aa27.95■■■□□ 2.06
CHFR-209ENST00000535181 CARD10Q9BWT7 1032 aa27.95■■■□□ 2.06
CHFR-209ENST00000535181 HSP90AB2PQ58FF8 381 aa27.93■■■□□ 2.06
CHFR-209ENST00000535181 WNK3Q9BYP7 1800 aa27.92■■■□□ 2.06
CHFR-209ENST00000535181 FAM98CQ17RN3 349 aaKnown RBP27.91■■■□□ 2.06
CHFR-209ENST00000535181 PPM1GO15355 546 aaPredicted RBP27.89■■■□□ 2.06
CHFR-209ENST00000535181 USP35Q9P2H5 1018 aa27.89■■■□□ 2.06
CHFR-209ENST00000535181 SEPT12Q8IYM1 358 aa27.88■■■□□ 2.05
CHFR-209ENST00000535181 PARP4Q9UKK3 1724 aaKnown RBP27.88■■■□□ 2.05
CHFR-209ENST00000535181 LTV1Q96GA3 475 aaPredicted RBP27.87■■■□□ 2.05
CHFR-209ENST00000535181 NLRP2Q9NX02 1062 aa27.87■■■□□ 2.05
CHFR-209ENST00000535181 PARD3Q8TEW0 1356 aa27.86■■■□□ 2.05
CHFR-209ENST00000535181 DISP2A7MBM2 1401 aa27.86■■■□□ 2.05
CHFR-209ENST00000535181 CDCA7Q9BWT1 371 aaPredicted RBP27.86■■■□□ 2.05
CHFR-209ENST00000535181 RGPD2P0DJD1 1756 aa27.85■■■□□ 2.05
CHFR-209ENST00000535181 BRWD3Q6RI45 1802 aa27.85■■■□□ 2.05
CHFR-209ENST00000535181 NCAPD2Q15021 1401 aa27.84■■■□□ 2.05
CHFR-209ENST00000535181 MTHFSP49914 203 aa27.82■■■□□ 2.04
CHFR-209ENST00000535181 LRRC37A3O60309 1634 aa27.81■■■□□ 2.04
CHFR-209ENST00000535181 A0A0G2JS52 829 aa27.8■■■□□ 2.04
CHFR-209ENST00000535181 MYT1Q01538 1121 aa27.8■■■□□ 2.04
CHFR-209ENST00000535181 CNGB1Q14028 1251 aaPredicted RBP27.8■■■□□ 2.04
CHFR-209ENST00000535181 EIF4A2Q14240 407 aaKnown RBP27.8■■■□□ 2.04
CHFR-209ENST00000535181 NBPF6Q5VWK0 638 aa27.8■■■□□ 2.04
CHFR-209ENST00000535181 NBPF4Q96M43 638 aa27.8■■■□□ 2.04
CHFR-209ENST00000535181 IL2RBP14784 551 aa27.77■■■□□ 2.04
CHFR-209ENST00000535181 PPP2R1AP30153 589 aa27.77■■■□□ 2.04
CHFR-209ENST00000535181 RALBP1Q15311 655 aa27.77■■■□□ 2.04
CHFR-209ENST00000535181 KRT27Q7Z3Y8 459 aa27.76■■■□□ 2.03
CHFR-209ENST00000535181 COL3A1P02461 1466 aaPredicted RBP27.76■■■□□ 2.03
CHFR-209ENST00000535181 RGPD1P0DJD0 1748 aa27.75■■■□□ 2.03
CHFR-209ENST00000535181 IGSF1Q8N6C5 1336 aa27.74■■■□□ 2.03
CHFR-209ENST00000535181 EYA1Q99502 592 aa27.74■■■□□ 2.03
CHFR-209ENST00000535181 TNS2Q63HR2 1409 aa27.74■■■□□ 2.03
CHFR-209ENST00000535181 DDB1Q16531 1140 aa27.73■■■□□ 2.03
CHFR-209ENST00000535181 IL13P35225 146 aa27.72■■■□□ 2.03
CHFR-209ENST00000535181 PLEKHG2Q9H7P9 1386 aa27.72■■■□□ 2.03
CHFR-209ENST00000535181 MEGF6O75095 1541 aa27.72■■■□□ 2.03
CHFR-209ENST00000535181 OVOS2A0A0G2JMS6 1433 aa27.71■■■□□ 2.03
CHFR-209ENST00000535181 PDE3BQ13370 1112 aa27.7■■■□□ 2.02
CHFR-209ENST00000535181 USHBP1Q8N6Y0 703 aa27.7■■■□□ 2.02
CHFR-209ENST00000535181 SOCS7O14512 581 aa27.69■■■□□ 2.02
CHFR-209ENST00000535181 CFAP53Q96M91 514 aa27.69■■■□□ 2.02
CHFR-209ENST00000535181 EP400Q96L91 3159 aa27.69■■■□□ 2.02
CHFR-209ENST00000535181 EXOC5O00471 708 aa27.68■■■□□ 2.02
CHFR-209ENST00000535181 DIAPH1O60610 1272 aaKnown RBP27.68■■■□□ 2.02
CHFR-209ENST00000535181 RAPGEF4Q8WZA2 1011 aa27.68■■■□□ 2.02
CHFR-209ENST00000535181 KDRP35968 1356 aa27.66■■■□□ 2.02
CHFR-209ENST00000535181 PRKRIP1Q9H875 184 aaPredicted RBP27.66■■■□□ 2.02
CHFR-209ENST00000535181 TATP17735 454 aaPredicted RBP27.65■■■□□ 2.02
CHFR-209ENST00000535181 BCL9O00512 1426 aa27.65■■■□□ 2.02
CHFR-209ENST00000535181 MYBBP1AQ9BQG0 1328 aaKnown RBP27.65■■■□□ 2.02
CHFR-209ENST00000535181 PKD1L3Q7Z443 1732 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms