RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 MAGI2Q86UL8 1455 aa8.03□□□□□ -1.12
ECHDC1-223ENST00000534442 POTEB3A0JP26 581 aa8.03□□□□□ -1.12
ECHDC1-223ENST00000534442 POTEBQ6S5H4 581 aa8.03□□□□□ -1.12
ECHDC1-223ENST00000534442 LAPTM4BQ86VI4 370 aa8.03□□□□□ -1.12
ECHDC1-223ENST00000534442 ZNF330Q9Y3S2 320 aaPredicted RBP8.03□□□□□ -1.12
ECHDC1-223ENST00000534442 SYNMO15061 1565 aa8.02□□□□□ -1.13
ECHDC1-223ENST00000534442 CEP170BQ9Y4F5 1589 aaPredicted RBP8.02□□□□□ -1.13
ECHDC1-223ENST00000534442 ATP10AO60312 1499 aa8.02□□□□□ -1.13
ECHDC1-223ENST00000534442 FAM205CA6NFA0 338 aa8.02□□□□□ -1.13
ECHDC1-223ENST00000534442 GIGYF1O75420 1035 aaPredicted RBP8.02□□□□□ -1.13
ECHDC1-223ENST00000534442 HDGFP51858 240 aaKnown RBP8.02□□□□□ -1.13
ECHDC1-223ENST00000534442 FUT2Q10981 343 aa8.02□□□□□ -1.13
ECHDC1-223ENST00000534442 CCDC125Q86Z20 511 aa8.02□□□□□ -1.13
ECHDC1-223ENST00000534442 SLF2Q8IX21 1173 aa8.02□□□□□ -1.13
ECHDC1-223ENST00000534442 TNS4Q8IZW8 715 aa8.02□□□□□ -1.13
ECHDC1-223ENST00000534442 GJD4Q96KN9 370 aaPredicted RBP8.02□□□□□ -1.13
ECHDC1-223ENST00000534442 PLSCR2Q9NRY7 297 aa8.02□□□□□ -1.13
ECHDC1-223ENST00000534442 TBC1D2BQ9UPU7 963 aa8.02□□□□□ -1.13
ECHDC1-223ENST00000534442 MYO3AQ8NEV4 1616 aa8.02□□□□□ -1.13
ECHDC1-223ENST00000534442 ROBO1Q9Y6N7 1651 aa8.02□□□□□ -1.13
ECHDC1-223ENST00000534442 HECW1Q76N89 1606 aa8.01□□□□□ -1.13
ECHDC1-223ENST00000534442 CFHP08603 1231 aa8.01□□□□□ -1.13
ECHDC1-223ENST00000534442 RBM6P78332 1123 aaKnown RBP8.01□□□□□ -1.13
ECHDC1-223ENST00000534442 CTDSPL2Q05D32 466 aa8.01□□□□□ -1.13
ECHDC1-223ENST00000534442 STRCP1A6NGW2 1772 aa8.01□□□□□ -1.13
ECHDC1-223ENST00000534442 CFAP99D6REC4 459 aa8□□□□□ -1.13
ECHDC1-223ENST00000534442 ABL2P42684 1182 aa8□□□□□ -1.13
ECHDC1-223ENST00000534442 MTMR2Q13614 643 aa8□□□□□ -1.13
ECHDC1-223ENST00000534442 HMX1Q9NP08 348 aaPredicted RBP8□□□□□ -1.13
ECHDC1-223ENST00000534442 NPATQ14207 1427 aa8□□□□□ -1.13
ECHDC1-223ENST00000534442 NWD1Q149M9 1564 aa8□□□□□ -1.13
ECHDC1-223ENST00000534442 POLR1AO95602 1720 aaPredicted RBP8□□□□□ -1.13
ECHDC1-223ENST00000534442 DISP1Q96F81 1524 aa7.99□□□□□ -1.13
ECHDC1-223ENST00000534442 TK2O00142 265 aa7.99□□□□□ -1.13
ECHDC1-223ENST00000534442 WRNQ14191 1432 aaPredicted RBP eCLIP7.99□□□□□ -1.13
ECHDC1-223ENST00000534442 ZFRQ96KR1 1074 aaKnown RBP7.99□□□□□ -1.13
ECHDC1-223ENST00000534442 TRIM34Q9BYJ4 488 aa7.99□□□□□ -1.13
ECHDC1-223ENST00000534442 NBPF3Q9H094 633 aa7.99□□□□□ -1.13
ECHDC1-223ENST00000534442 ESF1Q9H501 851 aaKnown RBP7.99□□□□□ -1.13
ECHDC1-223ENST00000534442 SERPINA10Q9UK55 444 aa7.99□□□□□ -1.13
ECHDC1-223ENST00000534442 AFF2P51816 1311 aa7.99□□□□□ -1.13
ECHDC1-223ENST00000534442 SPATA31A6Q5VVP1 1343 aa7.99□□□□□ -1.13
ECHDC1-223ENST00000534442 PHLPP1O60346 1717 aa7.98□□□□□ -1.13
ECHDC1-223ENST00000534442 KDM5CP41229 1560 aa7.98□□□□□ -1.13
ECHDC1-223ENST00000534442 POM121CA8CG34 1229 aa7.98□□□□□ -1.13
ECHDC1-223ENST00000534442 GPR37L1O60883 481 aa7.98□□□□□ -1.13
ECHDC1-223ENST00000534442 ATP6V1AP38606 617 aa7.98□□□□□ -1.13
ECHDC1-223ENST00000534442 SLC4A3P48751 1232 aa7.98□□□□□ -1.13
ECHDC1-223ENST00000534442 DEFB132Q7Z7B7 95 aa7.98□□□□□ -1.13
ECHDC1-223ENST00000534442 SYMPKQ92797 1274 aaKnown RBP7.98□□□□□ -1.13
ECHDC1-223ENST00000534442 HS3ST6Q96QI5 342 aa7.98□□□□□ -1.13
ECHDC1-223ENST00000534442 C6orf229H3BNL8 230 aa7.97□□□□□ -1.13
ECHDC1-223ENST00000534442 IRF5Q13568 498 aa7.97□□□□□ -1.13
ECHDC1-223ENST00000534442 GRIPAP1Q4V328 841 aa7.97□□□□□ -1.13
ECHDC1-223ENST00000534442 LRRN4Q8WUT4 740 aa7.97□□□□□ -1.13
ECHDC1-223ENST00000534442 CCDC97Q96F63 343 aaPredicted RBP7.97□□□□□ -1.13
ECHDC1-223ENST00000534442 PRM3Q9NNZ6 103 aa7.97□□□□□ -1.13
ECHDC1-223ENST00000534442 RNF40O75150 1001 aa7.96□□□□□ -1.14
ECHDC1-223ENST00000534442 MORN1Q5T089 497 aa7.96□□□□□ -1.14
ECHDC1-223ENST00000534442 QTRT2Q9H974 415 aaKnown RBP7.96□□□□□ -1.14
ECHDC1-223ENST00000534442 NDUFB9Q9Y6M9 179 aa7.96□□□□□ -1.14
ECHDC1-223ENST00000534442 CAMTA1Q9Y6Y1 1673 aa7.95□□□□□ -1.14
ECHDC1-223ENST00000534442 ADGRD1Q6QNK2 874 aa7.95□□□□□ -1.14
ECHDC1-223ENST00000534442 MRPL50Q8N5N7 158 aaKnown RBP7.95□□□□□ -1.14
ECHDC1-223ENST00000534442 HELBQ8NG08 1087 aaPredicted RBP7.95□□□□□ -1.14
ECHDC1-223ENST00000534442 FAM163AQ96GL9 167 aaPredicted RBP7.95□□□□□ -1.14
ECHDC1-223ENST00000534442 HRO43593 1189 aa7.94□□□□□ -1.14
ECHDC1-223ENST00000534442 ACTN4O43707 911 aaKnown RBP7.94□□□□□ -1.14
ECHDC1-223ENST00000534442 LSM11P83369 360 aaKnown RBP eCLIP7.94□□□□□ -1.14
ECHDC1-223ENST00000534442 KMT5BQ4FZB7 885 aa7.94□□□□□ -1.14
ECHDC1-223ENST00000534442 WWC1Q8IX03 1113 aa7.94□□□□□ -1.14
ECHDC1-223ENST00000534442 EPS8L1Q8TE68 723 aa7.94□□□□□ -1.14
ECHDC1-223ENST00000534442 TSC1Q92574 1164 aa7.94□□□□□ -1.14
ECHDC1-223ENST00000534442 TRIM26Q12899 539 aaPredicted RBP7.93□□□□□ -1.14
ECHDC1-223ENST00000534442 PUS10Q3MIT2 529 aaKnown RBP7.93□□□□□ -1.14
ECHDC1-223ENST00000534442 LCE2DQ5TA82 110 aaPredicted RBP7.93□□□□□ -1.14
ECHDC1-223ENST00000534442 PRR7Q8TB68 274 aa7.93□□□□□ -1.14
ECHDC1-223ENST00000534442 LRCH3Q96II8 777 aa7.93□□□□□ -1.14
ECHDC1-223ENST00000534442 SLC27A5Q9Y2P5 690 aa7.93□□□□□ -1.14
ECHDC1-223ENST00000534442 COL16A1Q07092 1604 aaPredicted RBP7.92□□□□□ -1.14
ECHDC1-223ENST00000534442 ADAMTS19Q8TE59 1207 aa7.92□□□□□ -1.14
ECHDC1-223ENST00000534442 GLMNQ92990 594 aa7.92□□□□□ -1.14
ECHDC1-223ENST00000534442 NGLY1Q96IV0 654 aa7.92□□□□□ -1.14
ECHDC1-223ENST00000534442 CALR3Q96L12 384 aaKnown RBP7.92□□□□□ -1.14
ECHDC1-223ENST00000534442 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.92□□□□□ -1.14
ECHDC1-223ENST00000534442 BLMP54132 1417 aaPredicted RBP7.92□□□□□ -1.14
ECHDC1-223ENST00000534442 IQGAP2Q13576 1575 aa7.92□□□□□ -1.14
ECHDC1-223ENST00000534442 PER1O15534 1290 aaPredicted RBP7.91□□□□□ -1.14
ECHDC1-223ENST00000534442 RETREG3Q86VR2 466 aa7.91□□□□□ -1.14
ECHDC1-223ENST00000534442 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.91□□□□□ -1.14
ECHDC1-223ENST00000534442 CNTLNQ9NXG0 1405 aa7.91□□□□□ -1.14
ECHDC1-223ENST00000534442 XIRP1Q702N8 1843 aaKnown RBP7.91□□□□□ -1.14
ECHDC1-223ENST00000534442 DNMT1P26358 1616 aaKnown RBP7.9□□□□□ -1.14
ECHDC1-223ENST00000534442 CFAP74Q9C0B2 1584 aa7.89□□□□□ -1.15
ECHDC1-223ENST00000534442 AGLP35573 1532 aa7.89□□□□□ -1.15
ECHDC1-223ENST00000534442 RTEL1-TNFRSF6BF6WH68 1400 aa7.89□□□□□ -1.15
ECHDC1-223ENST00000534442 FGD6Q6ZV73 1430 aa7.89□□□□□ -1.15
ECHDC1-223ENST00000534442 R3HDM1Q15032 1099 aaKnown RBP7.89□□□□□ -1.15
ECHDC1-223ENST00000534442 NR6A1Q15406 480 aa7.89□□□□□ -1.15
ECHDC1-223ENST00000534442 HDGFL1Q5TGJ6 251 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms