RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 NPC1L1Q9UHC9 1359 aa33.05■■■□□ 2.88
SIPA1-210ENST00000534406 STRN4Q9NRL3 753 aa33.04■■■□□ 2.88
SIPA1-210ENST00000534406 RTL1A6NKG5 1358 aa33.04■■■□□ 2.88
SIPA1-210ENST00000534406 GLI3P10071 1580 aa33.02■■■□□ 2.88
SIPA1-210ENST00000534406 FBLN1P23142 703 aa33.02■■■□□ 2.88
SIPA1-210ENST00000534406 EVA1CP58658 441 aa33.02■■■□□ 2.88
SIPA1-210ENST00000534406 RRS1Q15050 365 aaKnown RBP33.02■■■□□ 2.88
SIPA1-210ENST00000534406 CCDC9Q9Y3X0 531 aaKnown RBP33.02■■■□□ 2.88
SIPA1-210ENST00000534406 BLMP54132 1417 aaPredicted RBP33.02■■■□□ 2.88
SIPA1-210ENST00000534406 RXRBP28702 533 aa33.01■■■□□ 2.87
SIPA1-210ENST00000534406 RBM6P78332 1123 aaKnown RBP33.01■■■□□ 2.87
SIPA1-210ENST00000534406 MORC1Q86VD1 984 aa33.01■■■□□ 2.87
SIPA1-210ENST00000534406 AXIN2Q9Y2T1 843 aa33.01■■■□□ 2.87
SIPA1-210ENST00000534406 MAP2P11137 1827 aaKnown RBP33■■■□□ 2.87
SIPA1-210ENST00000534406 PEAK1Q9H792 1746 aa32.99■■■□□ 2.87
SIPA1-210ENST00000534406 AMPHP49418 695 aa32.99■■■□□ 2.87
SIPA1-210ENST00000534406 GJD4Q96KN9 370 aaPredicted RBP32.99■■■□□ 2.87
SIPA1-210ENST00000534406 KIF24Q5T7B8 1368 aa32.98■■■□□ 2.87
SIPA1-210ENST00000534406 TNNT2P45379 298 aaPredicted RBP32.98■■■□□ 2.87
SIPA1-210ENST00000534406 CC2D1BQ5T0F9 858 aaKnown RBP32.98■■■□□ 2.87
SIPA1-210ENST00000534406 IP6K1Q92551 441 aa32.98■■■□□ 2.87
SIPA1-210ENST00000534406 ZNF316A6NFI3 1004 aaPredicted RBP32.97■■■□□ 2.87
SIPA1-210ENST00000534406 CDK12Q9NYV4 1490 aaPredicted RBP32.97■■■□□ 2.87
SIPA1-210ENST00000534406 FLT4P35916 1363 aa32.96■■■□□ 2.87
SIPA1-210ENST00000534406 HOXC9P31274 260 aa32.96■■■□□ 2.87
SIPA1-210ENST00000534406 SPATA31A5Q5VU36 1347 aa32.96■■■□□ 2.87
SIPA1-210ENST00000534406 SPATA31A7Q8IWB4 1347 aa32.96■■■□□ 2.87
SIPA1-210ENST00000534406 DDX10Q13206 875 aaKnown RBP32.95■■■□□ 2.87
SIPA1-210ENST00000534406 LARP1Q6PKG0 1096 aaKnown RBP32.95■■■□□ 2.87
SIPA1-210ENST00000534406 WDR17Q8IZU2 1322 aa32.95■■■□□ 2.86
SIPA1-210ENST00000534406 FAM208AQ9UK61 1670 aaKnown RBP32.94■■■□□ 2.86
SIPA1-210ENST00000534406 CRB1P82279 1406 aa32.94■■■□□ 2.86
SIPA1-210ENST00000534406 EMILIN1Q9Y6C2 1016 aa32.94■■■□□ 2.86
SIPA1-210ENST00000534406 ERBB3P21860 1342 aa32.94■■■□□ 2.86
SIPA1-210ENST00000534406 CSB-PGBD3P0DP91 1061 aa32.92■■■□□ 2.86
SIPA1-210ENST00000534406 SPATA31A1Q5TZJ5 1347 aa32.92■■■□□ 2.86
SIPA1-210ENST00000534406 SMG6Q86US8 1419 aaKnown RBP32.92■■■□□ 2.86
SIPA1-210ENST00000534406 RGS12O14924 1447 aa32.91■■■□□ 2.86
SIPA1-210ENST00000534406 CNGB1Q14028 1251 aaPredicted RBP32.9■■■□□ 2.86
SIPA1-210ENST00000534406 ANKRD24Q8TF21 1146 aa32.9■■■□□ 2.86
SIPA1-210ENST00000534406 TOM1L2Q6ZVM7 507 aa32.89■■■□□ 2.86
SIPA1-210ENST00000534406 POLKQ9UBT6 870 aa32.89■■■□□ 2.86
SIPA1-210ENST00000534406 INSRP06213 1382 aa32.88■■■□□ 2.85
SIPA1-210ENST00000534406 PPM1GO15355 546 aaPredicted RBP32.88■■■□□ 2.85
SIPA1-210ENST00000534406 ILDR2Q71H61 639 aa32.88■■■□□ 2.85
SIPA1-210ENST00000534406 USP35Q9P2H5 1018 aa32.86■■■□□ 2.85
SIPA1-210ENST00000534406 LTV1Q96GA3 475 aaPredicted RBP32.85■■■□□ 2.85
SIPA1-210ENST00000534406 WNK3Q9BYP7 1800 aa32.85■■■□□ 2.85
SIPA1-210ENST00000534406 THSD7AQ9UPZ6 1657 aa32.85■■■□□ 2.85
SIPA1-210ENST00000534406 HSP90AB2PQ58FF8 381 aa32.84■■■□□ 2.85
SIPA1-210ENST00000534406 TCP11L2Q8N4U5 519 aa32.84■■■□□ 2.85
SIPA1-210ENST00000534406 FAM98CQ17RN3 349 aaKnown RBP32.83■■■□□ 2.85
SIPA1-210ENST00000534406 CARD10Q9BWT7 1032 aa32.82■■■□□ 2.84
SIPA1-210ENST00000534406 THRAP3Q9Y2W1 955 aaKnown RBP32.82■■■□□ 2.84
SIPA1-210ENST00000534406 NLRP2Q9NX02 1062 aa32.81■■■□□ 2.84
SIPA1-210ENST00000534406 BARGINQ6ZT62 677 aa32.8■■■□□ 2.84
SIPA1-210ENST00000534406 RGPD2P0DJD1 1756 aa32.8■■■□□ 2.84
SIPA1-210ENST00000534406 A0A0G2JS52 829 aa32.79■■■□□ 2.84
SIPA1-210ENST00000534406 MYT1Q01538 1121 aa32.79■■■□□ 2.84
SIPA1-210ENST00000534406 ONECUT3O60422 494 aaPredicted RBP32.78■■■□□ 2.84
SIPA1-210ENST00000534406 BRWD3Q6RI45 1802 aa32.76■■■□□ 2.83
SIPA1-210ENST00000534406 PARD3Q8TEW0 1356 aa32.75■■■□□ 2.83
SIPA1-210ENST00000534406 PARP4Q9UKK3 1724 aaKnown RBP32.75■■■□□ 2.83
SIPA1-210ENST00000534406 SEPT12Q8IYM1 358 aa32.75■■■□□ 2.83
SIPA1-210ENST00000534406 MTHFSP49914 203 aa32.73■■■□□ 2.83
SIPA1-210ENST00000534406 DISP2A7MBM2 1401 aa32.72■■■□□ 2.83
SIPA1-210ENST00000534406 LRRC37A3O60309 1634 aa32.71■■■□□ 2.83
SIPA1-210ENST00000534406 CDCA7Q9BWT1 371 aaPredicted RBP32.7■■■□□ 2.83
SIPA1-210ENST00000534406 EIF4A2Q14240 407 aaKnown RBP32.69■■■□□ 2.82
SIPA1-210ENST00000534406 NBPF6Q5VWK0 638 aa32.68■■■□□ 2.82
SIPA1-210ENST00000534406 NBPF4Q96M43 638 aa32.68■■■□□ 2.82
SIPA1-210ENST00000534406 PPP2R1AP30153 589 aa32.67■■■□□ 2.82
SIPA1-210ENST00000534406 NCAPD2Q15021 1401 aa32.66■■■□□ 2.82
SIPA1-210ENST00000534406 RALBP1Q15311 655 aa32.65■■■□□ 2.82
SIPA1-210ENST00000534406 COL3A1P02461 1466 aaPredicted RBP32.64■■■□□ 2.82
SIPA1-210ENST00000534406 IL2RBP14784 551 aa32.64■■■□□ 2.82
SIPA1-210ENST00000534406 USHBP1Q8N6Y0 703 aa32.64■■■□□ 2.82
SIPA1-210ENST00000534406 KRT27Q7Z3Y8 459 aa32.63■■■□□ 2.81
SIPA1-210ENST00000534406 TNS2Q63HR2 1409 aa32.62■■■□□ 2.81
SIPA1-210ENST00000534406 RGPD1P0DJD0 1748 aa32.62■■■□□ 2.81
SIPA1-210ENST00000534406 EYA1Q99502 592 aa32.61■■■□□ 2.81
SIPA1-210ENST00000534406 MEGF6O75095 1541 aa32.61■■■□□ 2.81
SIPA1-210ENST00000534406 CFAP53Q96M91 514 aa32.6■■■□□ 2.81
SIPA1-210ENST00000534406 IGSF1Q8N6C5 1336 aa32.59■■■□□ 2.81
SIPA1-210ENST00000534406 EP400Q96L91 3159 aa32.59■■■□□ 2.81
SIPA1-210ENST00000534406 DDB1Q16531 1140 aa32.59■■■□□ 2.81
SIPA1-210ENST00000534406 IL13P35225 146 aa32.58■■■□□ 2.81
SIPA1-210ENST00000534406 DIAPH1O60610 1272 aaKnown RBP32.57■■■□□ 2.8
SIPA1-210ENST00000534406 RAPGEF4Q8WZA2 1011 aa32.57■■■□□ 2.8
SIPA1-210ENST00000534406 OVOS2A0A0G2JMS6 1433 aa32.57■■■□□ 2.8
SIPA1-210ENST00000534406 PDE3BQ13370 1112 aa32.56■■■□□ 2.8
SIPA1-210ENST00000534406 MYBBP1AQ9BQG0 1328 aaKnown RBP32.54■■■□□ 2.8
SIPA1-210ENST00000534406 PRKRIP1Q9H875 184 aaPredicted RBP32.54■■■□□ 2.8
SIPA1-210ENST00000534406 EXOC5O00471 708 aa32.52■■■□□ 2.8
SIPA1-210ENST00000534406 TATP17735 454 aaPredicted RBP32.52■■■□□ 2.8
SIPA1-210ENST00000534406 SHANK3Q9BYB0 1731 aa32.51■■■□□ 2.79
SIPA1-210ENST00000534406 PKD1L3Q7Z443 1732 aa32.5■■■□□ 2.79
SIPA1-210ENST00000534406 KDRP35968 1356 aa32.48■■■□□ 2.79
SIPA1-210ENST00000534406 PLEKHG2Q9H7P9 1386 aa32.47■■■□□ 2.79
SIPA1-210ENST00000534406 FAM182BQ5T319 152 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms