RNA–Protein interactions for RNA: ENST00000534313.5

SIPA1-209, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,521 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-209ENST00000534313 SIRT2Q8IXJ6 389 aa21.64■■□□□ 1.06
SIPA1-209ENST00000534313 CHMP5Q9NZZ3 219 aa21.64■■□□□ 1.05
SIPA1-209ENST00000534313 GNAI1P63096 354 aa21.64■■□□□ 1.05
SIPA1-209ENST00000534313 NUDT16Q96DE0 195 aaKnown RBP21.64■■□□□ 1.05
SIPA1-209ENST00000534313 AEBP1Q8IUX7 1158 aa21.63■■□□□ 1.05
SIPA1-209ENST00000534313 COG3Q96JB2 828 aa21.63■■□□□ 1.05
SIPA1-209ENST00000534313 RIMS2Q9UQ26 1411 aa21.62■■□□□ 1.05
SIPA1-209ENST00000534313 UBE2Q2Q8WVN8 375 aa21.62■■□□□ 1.05
SIPA1-209ENST00000534313 RBM42Q9BTD8 480 aaKnown RBP21.62■■□□□ 1.05
SIPA1-209ENST00000534313 METP08581 1390 aa21.62■■□□□ 1.05
SIPA1-209ENST00000534313 APBB1O00213 710 aa21.62■■□□□ 1.05
SIPA1-209ENST00000534313 IFT57Q9NWB7 429 aa21.61■■□□□ 1.05
SIPA1-209ENST00000534313 ANKRD26Q9UPS8 1709 aa21.6■■□□□ 1.05
SIPA1-209ENST00000534313 FAM43AQ8N2R8 423 aa21.6■■□□□ 1.05
SIPA1-209ENST00000534313 CD2BP2O95400 341 aaKnown RBP21.59■■□□□ 1.05
SIPA1-209ENST00000534313 HSP90AB1P08238 724 aaKnown RBP21.59■■□□□ 1.05
SIPA1-209ENST00000534313 CLTCQ00610 1675 aaKnown RBP21.59■■□□□ 1.05
SIPA1-209ENST00000534313 MAP2P11137 1827 aaKnown RBP21.59■■□□□ 1.05
SIPA1-209ENST00000534313 A2ML1A8K2U0 1454 aa21.58■■□□□ 1.05
SIPA1-209ENST00000534313 TRAK2O60296 914 aa21.58■■□□□ 1.05
SIPA1-209ENST00000534313 L1TD1Q5T7N2 865 aaKnown RBP21.58■■□□□ 1.05
SIPA1-209ENST00000534313 KIF20BQ96Q89 1820 aa21.58■■□□□ 1.05
SIPA1-209ENST00000534313 CALD1Q05682 793 aaKnown RBP21.58■■□□□ 1.05
SIPA1-209ENST00000534313 GLIPR1L2Q4G1C9 344 aa21.58■■□□□ 1.05
SIPA1-209ENST00000534313 TBC1D9Q6ZT07 1266 aa21.58■■□□□ 1.05
SIPA1-209ENST00000534313 PANK2Q9BZ23 570 aa21.58■■□□□ 1.05
SIPA1-209ENST00000534313 HSP90AA1P07900 732 aaKnown RBP21.57■■□□□ 1.04
SIPA1-209ENST00000534313 BMP2KLQ5H9B9 411 aa21.57■■□□□ 1.04
SIPA1-209ENST00000534313 SULT6B1Q6IMI4 303 aa21.57■■□□□ 1.04
SIPA1-209ENST00000534313 CFAP44Q96MT7 982 aa21.57■■□□□ 1.04
SIPA1-209ENST00000534313 ZNF853P0CG23 659 aa21.57■■□□□ 1.04
SIPA1-209ENST00000534313 MCM10Q7L590 875 aa21.57■■□□□ 1.04
SIPA1-209ENST00000534313 C16orf71Q8IYS4 520 aaPredicted RBP21.56■■□□□ 1.04
SIPA1-209ENST00000534313 GCC1Q96CN9 775 aa21.56■■□□□ 1.04
SIPA1-209ENST00000534313 RBM25P49756 843 aaKnown RBP21.56■■□□□ 1.04
SIPA1-209ENST00000534313 CCDC61Q9Y6R9 512 aa21.56■■□□□ 1.04
SIPA1-209ENST00000534313 ZNF692Q9BU19 519 aaPredicted RBP21.55■■□□□ 1.04
SIPA1-209ENST00000534313 GOLGA6L3A6NEY3 463 aa21.55■■□□□ 1.04
SIPA1-209ENST00000534313 ZNF428Q96B54 188 aa21.55■■□□□ 1.04
SIPA1-209ENST00000534313 XRCC6P12956 609 aaKnown RBP eCLIP21.54■■□□□ 1.04
SIPA1-209ENST00000534313 MIS18AQ9NYP9 233 aa21.54■■□□□ 1.04
SIPA1-209ENST00000534313 ATP7BP35670 1465 aa21.54■■□□□ 1.04
SIPA1-209ENST00000534313 ABCC4O15439 1325 aa21.54■■□□□ 1.04
SIPA1-209ENST00000534313 CPS1P31327 1500 aa21.54■■□□□ 1.04
SIPA1-209ENST00000534313 KIF2CQ99661 725 aa21.54■■□□□ 1.04
SIPA1-209ENST00000534313 TSPOAP1O95153 1857 aa21.54■■□□□ 1.04
SIPA1-209ENST00000534313 BRPF1P55201 1214 aaPredicted RBP21.54■■□□□ 1.04
SIPA1-209ENST00000534313 PLPPR3Q6T4P5 718 aa21.54■■□□□ 1.04
SIPA1-209ENST00000534313 ARHGAP45Q92619 1136 aa21.54■■□□□ 1.04
SIPA1-209ENST00000534313 EDC4Q6P2E9 1401 aaKnown RBP21.53■■□□□ 1.04
SIPA1-209ENST00000534313 ESF1Q9H501 851 aaKnown RBP21.53■■□□□ 1.04
SIPA1-209ENST00000534313 PRR36Q9H6K5 1346 aa21.52■■□□□ 1.04
SIPA1-209ENST00000534313 CPSF1Q10570 1443 aaKnown RBP21.52■■□□□ 1.04
SIPA1-209ENST00000534313 OTUD7AQ8TE49 926 aaPredicted RBP21.52■■□□□ 1.04
SIPA1-209ENST00000534313 PTCH1Q13635 1447 aa21.51■■□□□ 1.03
SIPA1-209ENST00000534313 TNPO1Q92973 898 aaKnown RBP21.51■■□□□ 1.03
SIPA1-209ENST00000534313 EIF4A2Q14240 407 aaKnown RBP21.51■■□□□ 1.03
SIPA1-209ENST00000534313 API5Q9BZZ5 524 aaKnown RBP21.51■■□□□ 1.03
SIPA1-209ENST00000534313 GSPT1P15170 499 aaKnown RBP21.51■■□□□ 1.03
SIPA1-209ENST00000534313 SMARCA5O60264 1052 aaPredicted RBP21.5■■□□□ 1.03
SIPA1-209ENST00000534313 LMOD3Q0VAK6 560 aa21.5■■□□□ 1.03
SIPA1-209ENST00000534313 HSP90AB2PQ58FF8 381 aa21.5■■□□□ 1.03
SIPA1-209ENST00000534313 CDC42BPGQ6DT37 1551 aa21.49■■□□□ 1.03
SIPA1-209ENST00000534313 VSIG10Q8N0Z9 540 aa21.49■■□□□ 1.03
SIPA1-209ENST00000534313 RRAGDQ9NQL2 400 aaPredicted RBP21.49■■□□□ 1.03
SIPA1-209ENST00000534313 CHMP4BQ9H444 224 aaKnown RBP21.49■■□□□ 1.03
SIPA1-209ENST00000534313 PLEKHM2Q8IWE5 1019 aa21.47■■□□□ 1.03
SIPA1-209ENST00000534313 SNX21Q969T3 373 aa21.47■■□□□ 1.03
SIPA1-209ENST00000534313 PIK3R4Q99570 1358 aa21.47■■□□□ 1.03
SIPA1-209ENST00000534313 CDK12Q9NYV4 1490 aaPredicted RBP21.47■■□□□ 1.03
SIPA1-209ENST00000534313 FOXO3O43524 673 aa21.46■■□□□ 1.03
SIPA1-209ENST00000534313 TRIM44Q96DX7 344 aaPredicted RBP21.46■■□□□ 1.03
SIPA1-209ENST00000534313 CDC45O75419 566 aa21.45■■□□□ 1.02
SIPA1-209ENST00000534313 GAS2L2Q8NHY3 880 aa21.45■■□□□ 1.02
SIPA1-209ENST00000534313 DDIT3P35638 169 aa21.45■■□□□ 1.02
SIPA1-209ENST00000534313 SLC4A10Q6U841 1118 aa21.45■■□□□ 1.02
SIPA1-209ENST00000534313 MEIS3Q99687 375 aa21.45■■□□□ 1.02
SIPA1-209ENST00000534313 DLC1Q96QB1 1528 aa21.44■■□□□ 1.02
SIPA1-209ENST00000534313 AATKQ6ZMQ8 1374 aa21.44■■□□□ 1.02
SIPA1-209ENST00000534313 FSD2A1L4K1 749 aa21.44■■□□□ 1.02
SIPA1-209ENST00000534313 ACEP12821 1306 aa21.44■■□□□ 1.02
SIPA1-209ENST00000534313 DDX11L8A8MPP1 907 aa21.43■■□□□ 1.02
SIPA1-209ENST00000534313 K7ELQ4 463 aaPredicted RBP21.43■■□□□ 1.02
SIPA1-209ENST00000534313 RIMBP3CA6NJZ7 1639 aa21.43■■□□□ 1.02
SIPA1-209ENST00000534313 RIMBP3BA6NNM3 1639 aa21.43■■□□□ 1.02
SIPA1-209ENST00000534313 RIMBP3Q9UFD9 1639 aa21.43■■□□□ 1.02
SIPA1-209ENST00000534313 F6X3S4 739 aa21.43■■□□□ 1.02
SIPA1-209ENST00000534313 SSFA2P28290 1259 aa21.43■■□□□ 1.02
SIPA1-209ENST00000534313 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.43■■□□□ 1.02
SIPA1-209ENST00000534313 SLC26A8Q96RN1 970 aa21.42■■□□□ 1.02
SIPA1-209ENST00000534313 DCTPP1Q9H773 170 aa21.42■■□□□ 1.02
SIPA1-209ENST00000534313 TTC21BQ7Z4L5 1316 aa21.42■■□□□ 1.02
SIPA1-209ENST00000534313 SLC4A2P04920 1241 aa21.42■■□□□ 1.02
SIPA1-209ENST00000534313 ROBO2Q9HCK4 1378 aa21.42■■□□□ 1.02
SIPA1-209ENST00000534313 NCOA3Q9Y6Q9 1424 aa21.41■■□□□ 1.02
SIPA1-209ENST00000534313 DLG5Q8TDM6 1919 aa21.41■■□□□ 1.02
SIPA1-209ENST00000534313 HSP90AA2PQ14568 343 aaPredicted RBP21.41■■□□□ 1.02
SIPA1-209ENST00000534313 NECTIN2Q92692 538 aa21.41■■□□□ 1.02
SIPA1-209ENST00000534313 MSH6P52701 1360 aa21.41■■□□□ 1.02
SIPA1-209ENST00000534313 G2E3Q7L622 706 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms