RNA–Protein interactions for RNA: ENST00000534273.1

PACS1-215, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-215ENST00000534273 BARGINQ6ZT62 677 aa26.39■■□□□ 1.82
PACS1-215ENST00000534273 TCP11L2Q8N4U5 519 aa26.39■■□□□ 1.82
PACS1-215ENST00000534273 BRWD3Q6RI45 1802 aa26.37■■□□□ 1.81
PACS1-215ENST00000534273 COG3Q96JB2 828 aa26.37■■□□□ 1.81
PACS1-215ENST00000534273 THSD7AQ9UPZ6 1657 aa26.36■■□□□ 1.81
PACS1-215ENST00000534273 CARD14Q9BXL6 1004 aa26.36■■□□□ 1.81
PACS1-215ENST00000534273 THRAP3Q9Y2W1 955 aaKnown RBP26.36■■□□□ 1.81
PACS1-215ENST00000534273 CRB1P82279 1406 aa26.36■■□□□ 1.81
PACS1-215ENST00000534273 FYB1O15117 783 aa26.35■■□□□ 1.81
PACS1-215ENST00000534273 WDR17Q8IZU2 1322 aa26.35■■□□□ 1.81
PACS1-215ENST00000534273 CCDC125Q86Z20 511 aa26.34■■□□□ 1.81
PACS1-215ENST00000534273 TOM1L2Q6ZVM7 507 aa26.33■■□□□ 1.81
PACS1-215ENST00000534273 POLR3GLQ9BT43 218 aa26.33■■□□□ 1.81
PACS1-215ENST00000534273 ABCC6O95255 1503 aa26.33■■□□□ 1.81
PACS1-215ENST00000534273 MYOM1P52179 1685 aa26.32■■□□□ 1.8
PACS1-215ENST00000534273 GGNBP2Q9H3C7 697 aa26.31■■□□□ 1.8
PACS1-215ENST00000534273 CSB-PGBD3P0DP91 1061 aa26.3■■□□□ 1.8
PACS1-215ENST00000534273 C11orf95C9JLR9 678 aaPredicted RBP26.29■■□□□ 1.8
PACS1-215ENST00000534273 NSD3Q9BZ95 1437 aa26.29■■□□□ 1.8
PACS1-215ENST00000534273 EP400Q96L91 3159 aa26.29■■□□□ 1.8
PACS1-215ENST00000534273 FAM182BQ5T319 152 aa26.28■■□□□ 1.8
PACS1-215ENST00000534273 CARD10Q9BWT7 1032 aa26.28■■□□□ 1.8
PACS1-215ENST00000534273 BLMP54132 1417 aaPredicted RBP26.28■■□□□ 1.8
PACS1-215ENST00000534273 FBLN1P23142 703 aa26.27■■□□□ 1.8
PACS1-215ENST00000534273 IP6K1Q92551 441 aa26.27■■□□□ 1.8
PACS1-215ENST00000534273 ERBB3P21860 1342 aa26.25■■□□□ 1.79
PACS1-215ENST00000534273 MAP3K19Q56UN5 1328 aa26.25■■□□□ 1.79
PACS1-215ENST00000534273 PDE3BQ13370 1112 aa26.25■■□□□ 1.79
PACS1-215ENST00000534273 RGPD5Q99666 1765 aa26.24■■□□□ 1.79
PACS1-215ENST00000534273 ANKRD24Q8TF21 1146 aa26.23■■□□□ 1.79
PACS1-215ENST00000534273 LTN1O94822 1766 aa26.22■■□□□ 1.79
PACS1-215ENST00000534273 CGNL1Q0VF96 1302 aa26.21■■□□□ 1.79
PACS1-215ENST00000534273 FAM196AQ6ZSG2 479 aa26.21■■□□□ 1.79
PACS1-215ENST00000534273 CDCA7Q9BWT1 371 aaPredicted RBP26.21■■□□□ 1.79
PACS1-215ENST00000534273 PANK3Q9H999 370 aa26.21■■□□□ 1.79
PACS1-215ENST00000534273 NLRP2Q9NX02 1062 aa26.21■■□□□ 1.79
PACS1-215ENST00000534273 CCDC7Q96M83 1385 aa26.2■■□□□ 1.79
PACS1-215ENST00000534273 HOXC9P31274 260 aa26.2■■□□□ 1.78
PACS1-215ENST00000534273 AMPHP49418 695 aa26.2■■□□□ 1.78
PACS1-215ENST00000534273 SF3B2Q13435 895 aaKnown RBP26.2■■□□□ 1.78
PACS1-215ENST00000534273 RRS1Q15050 365 aaKnown RBP26.2■■□□□ 1.78
PACS1-215ENST00000534273 DISP2A7MBM2 1401 aa26.18■■□□□ 1.78
PACS1-215ENST00000534273 PARP4Q9UKK3 1724 aaKnown RBP26.17■■□□□ 1.78
PACS1-215ENST00000534273 DDB1Q16531 1140 aa26.17■■□□□ 1.78
PACS1-215ENST00000534273 DEFB132Q7Z7B7 95 aa26.17■■□□□ 1.78
PACS1-215ENST00000534273 KIF7Q2M1P5 1343 aa26.16■■□□□ 1.78
PACS1-215ENST00000534273 KIF20BQ96Q89 1820 aa26.16■■□□□ 1.78
PACS1-215ENST00000534273 LTV1Q96GA3 475 aaPredicted RBP26.16■■□□□ 1.78
PACS1-215ENST00000534273 RTL1A6NKG5 1358 aa26.16■■□□□ 1.78
PACS1-215ENST00000534273 TRIM37O94972 964 aa26.12■■□□□ 1.77
PACS1-215ENST00000534273 LRRC37A3O60309 1634 aa26.11■■□□□ 1.77
PACS1-215ENST00000534273 BAG6P46379 1132 aa26.11■■□□□ 1.77
PACS1-215ENST00000534273 EXOC5O00471 708 aa26.1■■□□□ 1.77
PACS1-215ENST00000534273 MARCH10Q8NA82 808 aaPredicted RBP26.1■■□□□ 1.77
PACS1-215ENST00000534273 KIF24Q5T7B8 1368 aa26.09■■□□□ 1.77
PACS1-215ENST00000534273 IL2RBP14784 551 aa26.09■■□□□ 1.77
PACS1-215ENST00000534273 EMILIN1Q9Y6C2 1016 aa26.09■■□□□ 1.77
PACS1-215ENST00000534273 WNK3Q9BYP7 1800 aa26.09■■□□□ 1.77
PACS1-215ENST00000534273 OVOS2A0A0G2JMS6 1433 aa26.08■■□□□ 1.77
PACS1-215ENST00000534273 HSP90AB2PQ58FF8 381 aa26.08■■□□□ 1.77
PACS1-215ENST00000534273 INSRP06213 1382 aa26.07■■□□□ 1.76
PACS1-215ENST00000534273 FLT4P35916 1363 aa26.07■■□□□ 1.76
PACS1-215ENST00000534273 RGPD1P0DJD0 1748 aa26.05■■□□□ 1.76
PACS1-215ENST00000534273 EN1Q05925 392 aaPredicted RBP26.05■■□□□ 1.76
PACS1-215ENST00000534273 KNSTRNQ9Y448 316 aa26.05■■□□□ 1.76
PACS1-215ENST00000534273 NSD2O96028 1365 aa26.05■■□□□ 1.76
PACS1-215ENST00000534273 PEAK1Q9H792 1746 aa26.05■■□□□ 1.76
PACS1-215ENST00000534273 TNS2Q63HR2 1409 aa26.05■■□□□ 1.76
PACS1-215ENST00000534273 APBA3O96018 575 aa26.03■■□□□ 1.76
PACS1-215ENST00000534273 NBPF6Q5VWK0 638 aa26.03■■□□□ 1.76
PACS1-215ENST00000534273 NBPF4Q96M43 638 aa26.03■■□□□ 1.76
PACS1-215ENST00000534273 POLKQ9UBT6 870 aa26.03■■□□□ 1.76
PACS1-215ENST00000534273 BCL9O00512 1426 aa26.03■■□□□ 1.76
PACS1-215ENST00000534273 FAM208AQ9UK61 1670 aaKnown RBP26.03■■□□□ 1.76
PACS1-215ENST00000534273 PPM1GO15355 546 aaPredicted RBP26.02■■□□□ 1.76
PACS1-215ENST00000534273 TNNT2P45379 298 aaPredicted RBP26.02■■□□□ 1.76
PACS1-215ENST00000534273 WASHC2AQ641Q2 1341 aa26.02■■□□□ 1.76
PACS1-215ENST00000534273 SMG6Q86US8 1419 aaKnown RBP26.02■■□□□ 1.76
PACS1-215ENST00000534273 TNS1Q9HBL0 1735 aaKnown RBP26.01■■□□□ 1.75
PACS1-215ENST00000534273 CAMKK2Q96RR4 588 aa26■■□□□ 1.75
PACS1-215ENST00000534273 AMER1Q5JTC6 1135 aaPredicted RBP25.99■■□□□ 1.75
PACS1-215ENST00000534273 MORC1Q86VD1 984 aa25.98■■□□□ 1.75
PACS1-215ENST00000534273 USHBP1Q8N6Y0 703 aa25.98■■□□□ 1.75
PACS1-215ENST00000534273 BCL11BQ9C0K0 894 aaPredicted RBP25.98■■□□□ 1.75
PACS1-215ENST00000534273 PER1O15534 1290 aaPredicted RBP25.97■■□□□ 1.75
PACS1-215ENST00000534273 EZH2Q15910 746 aaKnown RBP25.97■■□□□ 1.75
PACS1-215ENST00000534273 ANKRD26Q9UPS8 1709 aa25.97■■□□□ 1.75
PACS1-215ENST00000534273 PTF1AQ7RTS3 328 aa25.96■■□□□ 1.75
PACS1-215ENST00000534273 PARD3Q8TEW0 1356 aa25.95■■□□□ 1.74
PACS1-215ENST00000534273 MEGF6O75095 1541 aa25.94■■□□□ 1.74
PACS1-215ENST00000534273 RGPD2P0DJD1 1756 aa25.94■■□□□ 1.74
PACS1-215ENST00000534273 ZCRB1Q8TBF4 217 aaKnown RBP25.92■■□□□ 1.74
PACS1-215ENST00000534273 DDX54Q8TDD1 881 aaKnown RBP25.92■■□□□ 1.74
PACS1-215ENST00000534273 RAPGEF4Q8WZA2 1011 aa25.92■■□□□ 1.74
PACS1-215ENST00000534273 MAP2P11137 1827 aaKnown RBP25.91■■□□□ 1.74
PACS1-215ENST00000534273 KCNQ2O43526 872 aa25.9■■□□□ 1.74
PACS1-215ENST00000534273 SBF2Q86WG5 1849 aa25.9■■□□□ 1.74
PACS1-215ENST00000534273 PLSCR1O15162 318 aa25.89■■□□□ 1.74
PACS1-215ENST00000534273 TATP17735 454 aaPredicted RBP25.89■■□□□ 1.74
PACS1-215ENST00000534273 EIF4A2Q14240 407 aaKnown RBP25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms