RNA–Protein interactions for RNA: ENST00000534185.1

SOX13-209, Transcript of SRY-box 13, human

TSL 5

Gene SOX13, Length 723 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX13-209	ENST00000534185	LARP1	Q6PKG0	1096 aa	Known RBP	32.45	■■■□□ 2.79
SOX13-209	ENST00000534185	SEPT12	Q8IYM1	358 aa		32.45	■■■□□ 2.79
SOX13-209	ENST00000534185	COG3	Q96JB2	828 aa		32.45	■■■□□ 2.79
SOX13-209	ENST00000534185	USP35	Q9P2H5	1018 aa		32.45	■■■□□ 2.79
SOX13-209	ENST00000534185	CARD14	Q9BXL6	1004 aa		32.44	■■■□□ 2.78
SOX13-209	ENST00000534185	GGNBP2	Q9H3C7	697 aa		32.44	■■■□□ 2.78
SOX13-209	ENST00000534185	SPATA31A1	Q5TZJ5	1347 aa		32.43	■■■□□ 2.78
SOX13-209	ENST00000534185	AXIN2	Q9Y2T1	843 aa		32.42	■■■□□ 2.78
SOX13-209	ENST00000534185	FYB1	O15117	783 aa		32.4	■■■□□ 2.78
SOX13-209	ENST00000534185	THSD7A	Q9UPZ6	1657 aa		32.38	■■■□□ 2.77
SOX13-209	ENST00000534185	ABCC6	O95255	1503 aa		32.38	■■■□□ 2.77
SOX13-209	ENST00000534185	ONECUT3	O60422	494 aa	Predicted RBP	32.37	■■■□□ 2.77
SOX13-209	ENST00000534185	CRB1	P82279	1406 aa		32.36	■■■□□ 2.77
SOX13-209	ENST00000534185	KIF7	Q2M1P5	1343 aa		32.36	■■■□□ 2.77
SOX13-209	ENST00000534185	FBLN1	P23142	703 aa		32.35	■■■□□ 2.77
SOX13-209	ENST00000534185	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.35	■■■□□ 2.77
SOX13-209	ENST00000534185	CSB-PGBD3	P0DP91	1061 aa		32.34	■■■□□ 2.77
SOX13-209	ENST00000534185	TOM1L2	Q6ZVM7	507 aa		32.33	■■■□□ 2.77
SOX13-209	ENST00000534185	PANK3	Q9H999	370 aa		32.33	■■■□□ 2.77
SOX13-209	ENST00000534185	WDR17	Q8IZU2	1322 aa		32.32	■■■□□ 2.76
SOX13-209	ENST00000534185	TCP11L2	Q8N4U5	519 aa		32.31	■■■□□ 2.76
SOX13-209	ENST00000534185	KRT27	Q7Z3Y8	459 aa		32.3	■■■□□ 2.76
SOX13-209	ENST00000534185	CGNL1	Q0VF96	1302 aa		32.29	■■■□□ 2.76
SOX13-209	ENST00000534185	MAP3K19	Q56UN5	1328 aa		32.28	■■■□□ 2.76
SOX13-209	ENST00000534185	WNK3	Q9BYP7	1800 aa		32.28	■■■□□ 2.76
SOX13-209	ENST00000534185	ANKRD26	Q9UPS8	1709 aa		32.27	■■■□□ 2.76
SOX13-209	ENST00000534185	RRS1	Q15050	365 aa	Known RBP	32.27	■■■□□ 2.76
SOX13-209	ENST00000534185	BARGIN	Q6ZT62	677 aa		32.27	■■■□□ 2.76
SOX13-209	ENST00000534185	AMPH	P49418	695 aa		32.25	■■■□□ 2.75
SOX13-209	ENST00000534185	THRAP3	Q9Y2W1	955 aa	Known RBP	32.25	■■■□□ 2.75
SOX13-209	ENST00000534185	ERBB3	P21860	1342 aa		32.25	■■■□□ 2.75
SOX13-209	ENST00000534185	ANKRD24	Q8TF21	1146 aa		32.24	■■■□□ 2.75
SOX13-209	ENST00000534185	BLM	P54132	1417 aa	Predicted RBP	32.24	■■■□□ 2.75
SOX13-209	ENST00000534185	IP6K1	Q92551	441 aa		32.23	■■■□□ 2.75
SOX13-209	ENST00000534185	PARP4	Q9UKK3	1724 aa	Known RBP	32.23	■■■□□ 2.75
SOX13-209	ENST00000534185	FAM182B	Q5T319	152 aa		32.22	■■■□□ 2.75
SOX13-209	ENST00000534185	LTV1	Q96GA3	475 aa	Predicted RBP	32.22	■■■□□ 2.75
SOX13-209	ENST00000534185	EP400	Q96L91	3159 aa		32.22	■■■□□ 2.75
SOX13-209	ENST00000534185	CCDC7	Q96M83	1385 aa		32.21	■■■□□ 2.75
SOX13-209	ENST00000534185	PEAK1	Q9H792	1746 aa		32.2	■■■□□ 2.75
SOX13-209	ENST00000534185	LRRC37A3	O60309	1634 aa		32.2	■■■□□ 2.75
SOX13-209	ENST00000534185	HOXC9	P31274	260 aa		32.2	■■■□□ 2.75
SOX13-209	ENST00000534185	NLRP2	Q9NX02	1062 aa		32.2	■■■□□ 2.75
SOX13-209	ENST00000534185	WASHC2A	Q641Q2	1341 aa		32.2	■■■□□ 2.74
SOX13-209	ENST00000534185	CARD10	Q9BWT7	1032 aa		32.19	■■■□□ 2.74
SOX13-209	ENST00000534185	RTL1	A6NKG5	1358 aa		32.18	■■■□□ 2.74
SOX13-209	ENST00000534185	FAM208A	Q9UK61	1670 aa	Known RBP	32.18	■■■□□ 2.74
SOX13-209	ENST00000534185	TNNT2	P45379	298 aa	Predicted RBP	32.15	■■■□□ 2.74
SOX13-209	ENST00000534185	PDE3B	Q13370	1112 aa		32.15	■■■□□ 2.74
SOX13-209	ENST00000534185	KNSTRN	Q9Y448	316 aa		32.15	■■■□□ 2.74
SOX13-209	ENST00000534185	RGPD2	P0DJD1	1756 aa		32.14	■■■□□ 2.74
SOX13-209	ENST00000534185	EMILIN1	Q9Y6C2	1016 aa		32.14	■■■□□ 2.74
SOX13-209	ENST00000534185	MAP2	P11137	1827 aa	Known RBP	32.13	■■■□□ 2.73
SOX13-209	ENST00000534185	NSD2	O96028	1365 aa		32.11	■■■□□ 2.73
SOX13-209	ENST00000534185	PPM1G	O15355	546 aa	Predicted RBP	32.11	■■■□□ 2.73
SOX13-209	ENST00000534185	DISP2	A7MBM2	1401 aa		32.1	■■■□□ 2.73
SOX13-209	ENST00000534185	FLT4	P35916	1363 aa		32.1	■■■□□ 2.73
SOX13-209	ENST00000534185	DDB1	Q16531	1140 aa		32.09	■■■□□ 2.73
SOX13-209	ENST00000534185	SMG6	Q86US8	1419 aa	Known RBP	32.08	■■■□□ 2.73
SOX13-209	ENST00000534185	HSP90AB2P	Q58FF8	381 aa		32.07	■■■□□ 2.72
SOX13-209	ENST00000534185	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.07	■■■□□ 2.72
SOX13-209	ENST00000534185	RGPD1	P0DJD0	1748 aa		32.06	■■■□□ 2.72
SOX13-209	ENST00000534185	INSR	P06213	1382 aa		32.06	■■■□□ 2.72
SOX13-209	ENST00000534185	KIF24	Q5T7B8	1368 aa		32.06	■■■□□ 2.72
SOX13-209	ENST00000534185	MORC1	Q86VD1	984 aa		32.05	■■■□□ 2.72
SOX13-209	ENST00000534185	CCDC125	Q86Z20	511 aa		32.05	■■■□□ 2.72
SOX13-209	ENST00000534185	SF3B2	Q13435	895 aa	Known RBP	32.04	■■■□□ 2.72
SOX13-209	ENST00000534185	IL2RB	P14784	551 aa		32.02	■■■□□ 2.72
SOX13-209	ENST00000534185	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.02	■■■□□ 2.72
SOX13-209	ENST00000534185	FAM196A	Q6ZSG2	479 aa		32.02	■■■□□ 2.72
SOX13-209	ENST00000534185	POLK	Q9UBT6	870 aa		32.02	■■■□□ 2.72
SOX13-209	ENST00000534185	TNS1	Q9HBL0	1735 aa	Known RBP	32.02	■■■□□ 2.72
SOX13-209	ENST00000534185	TNS2	Q63HR2	1409 aa		32.01	■■■□□ 2.72
SOX13-209	ENST00000534185	CNGB1	Q14028	1251 aa	Predicted RBP	32.01	■■■□□ 2.71
SOX13-209	ENST00000534185	USHBP1	Q8N6Y0	703 aa		32	■■■□□ 2.71
SOX13-209	ENST00000534185	OVOS2	A0A0G2JMS6	1433 aa		32	■■■□□ 2.71
SOX13-209	ENST00000534185	EXOC5	O00471	708 aa		31.99	■■■□□ 2.71
SOX13-209	ENST00000534185	PER1	O15534	1290 aa	Predicted RBP	31.99	■■■□□ 2.71
SOX13-209	ENST00000534185	CC2D1B	Q5T0F9	858 aa	Known RBP	31.98	■■■□□ 2.71
SOX13-209	ENST00000534185	NBPF6	Q5VWK0	638 aa		31.98	■■■□□ 2.71
SOX13-209	ENST00000534185	NBPF4	Q96M43	638 aa		31.98	■■■□□ 2.71
SOX13-209	ENST00000534185	TRIM37	O94972	964 aa		31.97	■■■□□ 2.71
SOX13-209	ENST00000534185	DEFB132	Q7Z7B7	95 aa		31.97	■■■□□ 2.71
SOX13-209	ENST00000534185	MARCH10	Q8NA82	808 aa	Predicted RBP	31.96	■■■□□ 2.71
SOX13-209	ENST00000534185	MEGF6	O75095	1541 aa		31.93	■■■□□ 2.7
SOX13-209	ENST00000534185	SBF2	Q86WG5	1849 aa		31.92	■■■□□ 2.7
SOX13-209	ENST00000534185	BAG6	P46379	1132 aa		31.9	■■■□□ 2.7
SOX13-209	ENST00000534185	ZEB1	P37275	1124 aa	Predicted RBP	31.88	■■■□□ 2.69
SOX13-209	ENST00000534185	SHANK3	Q9BYB0	1731 aa		31.88	■■■□□ 2.69
SOX13-209	ENST00000534185	EIF4A2	Q14240	407 aa	Known RBP	31.86	■■■□□ 2.69
SOX13-209	ENST00000534185	RAPGEF4	Q8WZA2	1011 aa		31.86	■■■□□ 2.69
SOX13-209	ENST00000534185	APBA3	O96018	575 aa		31.85	■■■□□ 2.69
SOX13-209	ENST00000534185	EN1	Q05925	392 aa	Predicted RBP	31.85	■■■□□ 2.69
SOX13-209	ENST00000534185	DDX54	Q8TDD1	881 aa	Known RBP	31.85	■■■□□ 2.69
SOX13-209	ENST00000534185	NPC1L1	Q9UHC9	1359 aa		31.83	■■■□□ 2.69
SOX13-209	ENST00000534185	TAT	P17735	454 aa	Predicted RBP	31.83	■■■□□ 2.69
SOX13-209	ENST00000534185	EYA1	Q99502	592 aa		31.83	■■■□□ 2.69
SOX13-209	ENST00000534185	PTF1A	Q7RTS3	328 aa		31.8	■■■□□ 2.68
SOX13-209	ENST00000534185	ZCRB1	Q8TBF4	217 aa	Known RBP	31.8	■■■□□ 2.68
SOX13-209	ENST00000534185	ACSBG1	Q96GR2	724 aa		31.8	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms