RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 RPRD2Q5VT52 1461 aaKnown RBP8.89□□□□□ -0.99
CMTM1-220ENST00000534143 CLTCQ00610 1675 aaKnown RBP8.89□□□□□ -0.99
CMTM1-220ENST00000534143 TULP1O00294 542 aaPredicted RBP8.89□□□□□ -0.99
CMTM1-220ENST00000534143 GNPATO15228 680 aa8.89□□□□□ -0.99
CMTM1-220ENST00000534143 PPP4CP60510 307 aa8.89□□□□□ -0.99
CMTM1-220ENST00000534143 MLECQ14165 292 aa8.89□□□□□ -0.99
CMTM1-220ENST00000534143 RBM46Q8TBY0 533 aaKnown RBP8.89□□□□□ -0.99
CMTM1-220ENST00000534143 LMTK3Q96Q04 1460 aa8.89□□□□□ -0.99
CMTM1-220ENST00000534143 NPATQ14207 1427 aa8.88□□□□□ -0.99
CMTM1-220ENST00000534143 SPHKAPQ2M3C7 1700 aa8.88□□□□□ -0.99
CMTM1-220ENST00000534143 GPIHBP1Q8IV16 184 aa8.88□□□□□ -0.99
CMTM1-220ENST00000534143 NEUROD1Q13562 356 aa8.87□□□□□ -0.99
CMTM1-220ENST00000534143 FAM161AQ3B820 660 aa8.87□□□□□ -0.99
CMTM1-220ENST00000534143 SWT1Q5T5J6 900 aaKnown RBP8.87□□□□□ -0.99
CMTM1-220ENST00000534143 TIMELESSQ9UNS1 1208 aa8.87□□□□□ -0.99
CMTM1-220ENST00000534143 NOS1P29475 1434 aa8.87□□□□□ -0.99
CMTM1-220ENST00000534143 TRPM2O94759 1503 aa8.86□□□□□ -0.99
CMTM1-220ENST00000534143 MROH2AA6NES4 1674 aa8.86□□□□□ -0.99
CMTM1-220ENST00000534143 FECHP22830 423 aa8.86□□□□□ -0.99
CMTM1-220ENST00000534143 DNAJB2P25686 324 aa8.86□□□□□ -0.99
CMTM1-220ENST00000534143 IFFO2Q5TF58 517 aa8.86□□□□□ -0.99
CMTM1-220ENST00000534143 CNTLNQ9NXG0 1405 aa8.86□□□□□ -0.99
CMTM1-220ENST00000534143 ZMYM3Q14202 1370 aa8.86□□□□□ -0.99
CMTM1-220ENST00000534143 PREX1Q8TCU6 1659 aa8.85□□□□□ -0.99
CMTM1-220ENST00000534143 OATP04181 439 aa8.85□□□□□ -0.99
CMTM1-220ENST00000534143 SLF2Q8IX21 1173 aa8.85□□□□□ -0.99
CMTM1-220ENST00000534143 CLTCL1P53675 1640 aa8.84□□□□□ -0.99
CMTM1-220ENST00000534143 CCDC144AA2RUR9 1427 aa8.84□□□□□ -0.99
CMTM1-220ENST00000534143 RCCD1A6NED2 376 aa8.84□□□□□ -0.99
CMTM1-220ENST00000534143 SYNMO15061 1565 aa8.84□□□□□ -0.99
CMTM1-220ENST00000534143 FBXO31Q5XUX0 539 aaPredicted RBP8.84□□□□□ -0.99
CMTM1-220ENST00000534143 PXYLP1Q8TE99 480 aa8.84□□□□□ -0.99
CMTM1-220ENST00000534143 ESF1Q9H501 851 aaKnown RBP8.84□□□□□ -0.99
CMTM1-220ENST00000534143 ERVK-7P63135 1459 aa8.83□□□□□ -1
CMTM1-220ENST00000534143 SPATA31D1Q6ZQQ2 1576 aa8.83□□□□□ -1
CMTM1-220ENST00000534143 ITGBL1O95965 494 aaPredicted RBP8.83□□□□□ -1
CMTM1-220ENST00000534143 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.83□□□□□ -1
CMTM1-220ENST00000534143 TMEM134Q9H6X4 195 aa8.83□□□□□ -1
CMTM1-220ENST00000534143 PIK3C2BO00750 1634 aa8.83□□□□□ -1
CMTM1-220ENST00000534143 NEURL4Q96JN8 1562 aa8.82□□□□□ -1
CMTM1-220ENST00000534143 C3P01024 1663 aa8.82□□□□□ -1
CMTM1-220ENST00000534143 SPATA31E1Q6ZUB1 1445 aa8.82□□□□□ -1
CMTM1-220ENST00000534143 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.82□□□□□ -1
CMTM1-220ENST00000534143 RNF40O75150 1001 aa8.82□□□□□ -1
CMTM1-220ENST00000534143 PPP1R15AO75807 674 aaPredicted RBP8.82□□□□□ -1
CMTM1-220ENST00000534143 SLC4A3P48751 1232 aa8.82□□□□□ -1
CMTM1-220ENST00000534143 NECTIN2Q92692 538 aa8.82□□□□□ -1
CMTM1-220ENST00000534143 L3MBTL2Q969R5 705 aa8.82□□□□□ -1
CMTM1-220ENST00000534143 TONSLQ96HA7 1378 aa8.82□□□□□ -1
CMTM1-220ENST00000534143 KIF1BO60333 1816 aa8.82□□□□□ -1
CMTM1-220ENST00000534143 UGGT1Q9NYU2 1555 aa8.82□□□□□ -1
CMTM1-220ENST00000534143 HSPA2P54652 639 aa8.81□□□□□ -1
CMTM1-220ENST00000534143 IDI1Q13907 227 aa8.81□□□□□ -1
CMTM1-220ENST00000534143 METTL3Q86U44 580 aaKnown RBP8.81□□□□□ -1
CMTM1-220ENST00000534143 SLC52A1Q9NWF4 448 aa8.81□□□□□ -1
CMTM1-220ENST00000534143 CEBPAP49715 358 aaPredicted RBP8.79□□□□□ -1
CMTM1-220ENST00000534143 ADGRB3O60242 1522 aa8.79□□□□□ -1
CMTM1-220ENST00000534143 STRCQ7RTU9 1775 aa8.78□□□□□ -1
CMTM1-220ENST00000534143 APLP1P51693 650 aa8.78□□□□□ -1
CMTM1-220ENST00000534143 KCNC4Q03721 635 aa8.78□□□□□ -1
CMTM1-220ENST00000534143 RGL3Q3MIN7 710 aa8.78□□□□□ -1
CMTM1-220ENST00000534143 TMEM131LA2VDJ0 1609 aa8.78□□□□□ -1
CMTM1-220ENST00000534143 MYO5BQ9ULV0 1848 aa8.77□□□□□ -1
CMTM1-220ENST00000534143 TNRQ92752 1358 aa8.77□□□□□ -1.01
CMTM1-220ENST00000534143 SETD1BQ9UPS6 1966 aaKnown RBP8.77□□□□□ -1.01
CMTM1-220ENST00000534143 IFT172Q9UG01 1749 aa8.77□□□□□ -1.01
CMTM1-220ENST00000534143 NBPF8Q3BBV2 869 aa8.76□□□□□ -1.01
CMTM1-220ENST00000534143 TJAP1Q5JTD0 557 aa8.76□□□□□ -1.01
CMTM1-220ENST00000534143 LMOD2Q6P5Q4 547 aa8.76□□□□□ -1.01
CMTM1-220ENST00000534143 FBXO41Q8TF61 875 aa8.76□□□□□ -1.01
CMTM1-220ENST00000534143 UHRF1BP1Q6BDS2 1440 aa8.76□□□□□ -1.01
CMTM1-220ENST00000534143 RPGRIP1LQ68CZ1 1315 aa8.76□□□□□ -1.01
CMTM1-220ENST00000534143 KDM5AP29375 1690 aaKnown RBP8.75□□□□□ -1.01
CMTM1-220ENST00000534143 MAP2K5Q13163 448 aa8.75□□□□□ -1.01
CMTM1-220ENST00000534143 DCAF11Q8TEB1 546 aa8.75□□□□□ -1.01
CMTM1-220ENST00000534143 PPLO60437 1756 aa8.75□□□□□ -1.01
CMTM1-220ENST00000534143 A0A0G2JS52 829 aa8.74□□□□□ -1.01
CMTM1-220ENST00000534143 PHOX2BQ99453 314 aa8.74□□□□□ -1.01
CMTM1-220ENST00000534143 MTRQ99707 1265 aa8.74□□□□□ -1.01
CMTM1-220ENST00000534143 PRR14Q9BWN1 585 aa8.74□□□□□ -1.01
CMTM1-220ENST00000534143 DAXXQ9UER7 740 aaPredicted RBP8.74□□□□□ -1.01
CMTM1-220ENST00000534143 A2ML1A8K2U0 1454 aa8.74□□□□□ -1.01
CMTM1-220ENST00000534143 NLRP1Q9C000 1473 aa8.74□□□□□ -1.01
CMTM1-220ENST00000534143 MINK1Q8N4C8 1332 aaPredicted RBP8.74□□□□□ -1.01
CMTM1-220ENST00000534143 UBR1Q8IWV7 1749 aa8.74□□□□□ -1.01
CMTM1-220ENST00000534143 IRF6O14896 467 aa8.73□□□□□ -1.01
CMTM1-220ENST00000534143 SLC10A3P09131 477 aa8.73□□□□□ -1.01
CMTM1-220ENST00000534143 IL21Q9HBE4 155 aa8.73□□□□□ -1.01
CMTM1-220ENST00000534143 NEXMIFQ5QGS0 1516 aa8.73□□□□□ -1.01
CMTM1-220ENST00000534143 ZFYVE9O95405 1425 aa8.72□□□□□ -1.01
CMTM1-220ENST00000534143 PRAG1Q86YV5 1406 aa8.72□□□□□ -1.01
CMTM1-220ENST00000534143 MYOM2P54296 1465 aa8.72□□□□□ -1.01
CMTM1-220ENST00000534143 NRXN1Q9ULB1 1477 aa8.72□□□□□ -1.01
CMTM1-220ENST00000534143 ZNF326Q5BKZ1 582 aaKnown RBP8.72□□□□□ -1.01
CMTM1-220ENST00000534143 MYO3AQ8NEV4 1616 aa8.72□□□□□ -1.01
CMTM1-220ENST00000534143 KMT5BQ4FZB7 885 aa8.71□□□□□ -1.02
CMTM1-220ENST00000534143 TRPM1Q7Z4N2 1603 aa8.71□□□□□ -1.02
CMTM1-220ENST00000534143 ADGRF5Q8IZF2 1346 aa8.71□□□□□ -1.02
CMTM1-220ENST00000534143 ZNF142P52746 1687 aaPredicted RBP8.7□□□□□ -1.02
CMTM1-220ENST00000534143 ACTN4O43707 911 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms