RNA–Protein interactions for RNA: ENST00000534098.1

TTC39A-218, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2

Gene TTC39A, Length 930 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-218ENST00000534098 PPP1R1BQ9UD71 204 aaPredicted RBP16.91■□□□□ 0.3
TTC39A-218ENST00000534098 DDB1Q16531 1140 aa16.9■□□□□ 0.3
TTC39A-218ENST00000534098 ANO8Q9HCE9 1232 aaPredicted RBP16.9■□□□□ 0.3
TTC39A-218ENST00000534098 TRPM1Q7Z4N2 1603 aa16.89■□□□□ 0.29
TTC39A-218ENST00000534098 CPSF1Q10570 1443 aaKnown RBP16.89■□□□□ 0.29
TTC39A-218ENST00000534098 TOM1L2Q6ZVM7 507 aa16.89■□□□□ 0.29
TTC39A-218ENST00000534098 PTF1AQ7RTS3 328 aa16.89■□□□□ 0.29
TTC39A-218ENST00000534098 WDR17Q8IZU2 1322 aa16.89■□□□□ 0.29
TTC39A-218ENST00000534098 BCL9O00512 1426 aa16.88■□□□□ 0.29
TTC39A-218ENST00000534098 BCL11BQ9C0K0 894 aaPredicted RBP16.88■□□□□ 0.29
TTC39A-218ENST00000534098 AXIN2Q9Y2T1 843 aa16.88■□□□□ 0.29
TTC39A-218ENST00000534098 MARCH10Q8NA82 808 aaPredicted RBP16.87■□□□□ 0.29
TTC39A-218ENST00000534098 MYOM1P52179 1685 aa16.86■□□□□ 0.29
TTC39A-218ENST00000534098 ARHGEF25Q86VW2 580 aa16.85■□□□□ 0.29
TTC39A-218ENST00000534098 PROM2Q8N271 834 aa16.85■□□□□ 0.29
TTC39A-218ENST00000534098 CDCA7Q9BWT1 371 aaPredicted RBP16.85■□□□□ 0.29
TTC39A-218ENST00000534098 NFAT5O94916 1531 aa16.85■□□□□ 0.29
TTC39A-218ENST00000534098 PDGFDQ9GZP0 370 aaPredicted RBP16.84■□□□□ 0.29
TTC39A-218ENST00000534098 EVC2Q86UK5 1308 aa16.84■□□□□ 0.29
TTC39A-218ENST00000534098 DCAF8L1A6NGE4 600 aa16.83■□□□□ 0.28
TTC39A-218ENST00000534098 ABCC6O95255 1503 aa16.83■□□□□ 0.28
TTC39A-218ENST00000534098 MON2Q7Z3U7 1717 aa16.83■□□□□ 0.28
TTC39A-218ENST00000534098 TTC21BQ7Z4L5 1316 aa16.83■□□□□ 0.28
TTC39A-218ENST00000534098 CARD10Q9BWT7 1032 aa16.83■□□□□ 0.28
TTC39A-218ENST00000534098 NHSQ6T4R5 1651 aa16.82■□□□□ 0.28
TTC39A-218ENST00000534098 KCNH5Q8NCM2 988 aa16.82■□□□□ 0.28
TTC39A-218ENST00000534098 USP54Q70EL1 1684 aa16.81■□□□□ 0.28
TTC39A-218ENST00000534098 ZNF692Q9BU19 519 aaPredicted RBP16.81■□□□□ 0.28
TTC39A-218ENST00000534098 TTC21AQ8NDW8 1320 aa16.8■□□□□ 0.28
TTC39A-218ENST00000534098 ZBTB7AO95365 584 aa16.8■□□□□ 0.28
TTC39A-218ENST00000534098 PTGER2P43116 358 aa16.8■□□□□ 0.28
TTC39A-218ENST00000534098 TXNRD1Q16881 649 aa16.8■□□□□ 0.28
TTC39A-218ENST00000534098 L3MBTL2Q969R5 705 aa16.8■□□□□ 0.28
TTC39A-218ENST00000534098 CHD4Q14839 1912 aa16.8■□□□□ 0.28
TTC39A-218ENST00000534098 TNS2Q63HR2 1409 aa16.79■□□□□ 0.28
TTC39A-218ENST00000534098 LTN1O94822 1766 aa16.79■□□□□ 0.28
TTC39A-218ENST00000534098 KAT6BQ8WYB5 2073 aa16.79■□□□□ 0.28
TTC39A-218ENST00000534098 CCDC7Q96M83 1385 aa16.79■□□□□ 0.28
TTC39A-218ENST00000534098 SOX12O15370 315 aa16.79■□□□□ 0.28
TTC39A-218ENST00000534098 CSB-PGBD3P0DP91 1061 aa16.79■□□□□ 0.28
TTC39A-218ENST00000534098 EXOC5O00471 708 aa16.78■□□□□ 0.28
TTC39A-218ENST00000534098 PAPPAQ13219 1627 aa16.78■□□□□ 0.28
TTC39A-218ENST00000534098 BTAF1O14981 1849 aa16.77■□□□□ 0.28
TTC39A-218ENST00000534098 SLC15A2Q16348 729 aa16.77■□□□□ 0.28
TTC39A-218ENST00000534098 STK32BQ9NY57 414 aa16.77■□□□□ 0.28
TTC39A-218ENST00000534098 KTN1Q86UP2 1357 aaKnown RBP16.77■□□□□ 0.27
TTC39A-218ENST00000534098 ADRA2BP18089 450 aa16.76■□□□□ 0.27
TTC39A-218ENST00000534098 ATF5Q9Y2D1 282 aaPredicted RBP16.76■□□□□ 0.27
TTC39A-218ENST00000534098 ROCK2O75116 1388 aaKnown RBP16.76■□□□□ 0.27
TTC39A-218ENST00000534098 SGIP1Q9BQI5 828 aa16.73■□□□□ 0.27
TTC39A-218ENST00000534098 MTFR1LQ9H019 292 aa16.73■□□□□ 0.27
TTC39A-218ENST00000534098 USP31Q70CQ4 1352 aa16.73■□□□□ 0.27
TTC39A-218ENST00000534098 ERBB3P21860 1342 aa16.72■□□□□ 0.27
TTC39A-218ENST00000534098 SYT17Q9BSW7 474 aa16.72■□□□□ 0.27
TTC39A-218ENST00000534098 FHDC1Q9C0D6 1143 aaPredicted RBP16.72■□□□□ 0.27
TTC39A-218ENST00000534098 CD163L1Q9NR16 1453 aa16.72■□□□□ 0.27
TTC39A-218ENST00000534098 QSER1Q2KHR3 1735 aa16.71■□□□□ 0.27
TTC39A-218ENST00000534098 PIAS4Q8N2W9 510 aaPredicted RBP16.71■□□□□ 0.27
TTC39A-218ENST00000534098 ACSBG1Q96GR2 724 aa16.71■□□□□ 0.27
TTC39A-218ENST00000534098 SIN3AQ96ST3 1273 aa16.71■□□□□ 0.27
TTC39A-218ENST00000534098 SBNO2Q9Y2G9 1366 aa16.71■□□□□ 0.27
TTC39A-218ENST00000534098 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.7■□□□□ 0.26
TTC39A-218ENST00000534098 ZNF784Q8NCA9 323 aaPredicted RBP16.7■□□□□ 0.26
TTC39A-218ENST00000534098 IL2RBP14784 551 aa16.69■□□□□ 0.26
TTC39A-218ENST00000534098 NLRP2Q9NX02 1062 aa16.69■□□□□ 0.26
TTC39A-218ENST00000534098 FAM208AQ9UK61 1670 aaKnown RBP16.69■□□□□ 0.26
TTC39A-218ENST00000534098 COL24A1Q17RW2 1714 aa16.68■□□□□ 0.26
TTC39A-218ENST00000534098 NME9Q86XW9 330 aa16.68■□□□□ 0.26
TTC39A-218ENST00000534098 TUBGCP6Q96RT7 1819 aa16.68■□□□□ 0.26
TTC39A-218ENST00000534098 MAP3K5Q99683 1374 aa16.67■□□□□ 0.26
TTC39A-218ENST00000534098 ZNF827Q17R98 1081 aa16.66■□□□□ 0.26
TTC39A-218ENST00000534098 ARXQ96QS3 562 aa16.66■□□□□ 0.26
TTC39A-218ENST00000534098 EDC4Q6P2E9 1401 aaKnown RBP16.65■□□□□ 0.26
TTC39A-218ENST00000534098 NEUROD1Q13562 356 aa16.65■□□□□ 0.26
TTC39A-218ENST00000534098 ANKRD24Q8TF21 1146 aa16.65■□□□□ 0.26
TTC39A-218ENST00000534098 LRRC4BQ9NT99 713 aa16.65■□□□□ 0.26
TTC39A-218ENST00000534098 UTRNP46939 3433 aa16.64■□□□□ 0.25
TTC39A-218ENST00000534098 LY75O60449 1722 aa16.63■□□□□ 0.25
TTC39A-218ENST00000534098 DOT1LQ8TEK3 1739 aa16.63■□□□□ 0.25
TTC39A-218ENST00000534098 SHANK3Q9BYB0 1731 aa16.63■□□□□ 0.25
TTC39A-218ENST00000534098 RGPD2P0DJD1 1756 aa16.63■□□□□ 0.25
TTC39A-218ENST00000534098 HDGFL2Q7Z4V5 671 aaPredicted RBP16.62■□□□□ 0.25
TTC39A-218ENST00000534098 SLC12A5Q9H2X9 1139 aa16.62■□□□□ 0.25
TTC39A-218ENST00000534098 TMC1Q8TDI8 760 aa16.61■□□□□ 0.25
TTC39A-218ENST00000534098 AKT1S1Q96B36 256 aa16.61■□□□□ 0.25
TTC39A-218ENST00000534098 A0A1W2PP64 1363 aa16.61■□□□□ 0.25
TTC39A-218ENST00000534098 SLC27A3Q5K4L6 730 aa16.59■□□□□ 0.25
TTC39A-218ENST00000534098 SLC16A10Q8TF71 515 aa16.59■□□□□ 0.25
TTC39A-218ENST00000534098 IP6K1Q92551 441 aa16.59■□□□□ 0.25
TTC39A-218ENST00000534098 CARD11Q9BXL7 1154 aa16.59■□□□□ 0.25
TTC39A-218ENST00000534098 TERF2IPQ9NYB0 399 aa16.58■□□□□ 0.24
TTC39A-218ENST00000534098 PNPLA7Q6ZV29 1317 aa16.58■□□□□ 0.24
TTC39A-218ENST00000534098 MSH5O43196 834 aa16.57■□□□□ 0.24
TTC39A-218ENST00000534098 DDX54Q8TDD1 881 aaKnown RBP16.57■□□□□ 0.24
TTC39A-218ENST00000534098 C1QTNF8P60827 252 aa16.56■□□□□ 0.24
TTC39A-218ENST00000534098 PUS7Q96PZ0 661 aaKnown RBP16.56■□□□□ 0.24
TTC39A-218ENST00000534098 NSD2O96028 1365 aa16.55■□□□□ 0.24
TTC39A-218ENST00000534098 ANKRD36BQ8N2N9 1353 aa16.55■□□□□ 0.24
TTC39A-218ENST00000534098 GPR162Q16538 588 aa16.55■□□□□ 0.24
TTC39A-218ENST00000534098 LTV1Q96GA3 475 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms