RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 OVOS2A0A0J9YW53 1432 aa24.06■■□□□ 1.44
CAPRIN1-216ENST00000534042 CPSF1Q10570 1443 aaKnown RBP24.06■■□□□ 1.44
CAPRIN1-216ENST00000534042 OVOS2Q6IE36 1432 aa24.06■■□□□ 1.44
CAPRIN1-216ENST00000534042 NUP188Q5SRE5 1749 aa24.05■■□□□ 1.44
CAPRIN1-216ENST00000534042 KTN1Q86UP2 1357 aaKnown RBP24.03■■□□□ 1.44
CAPRIN1-216ENST00000534042 RGPD5Q99666 1765 aa24.03■■□□□ 1.44
CAPRIN1-216ENST00000534042 LRRC37A3O60309 1634 aa24.03■■□□□ 1.44
CAPRIN1-216ENST00000534042 CSB-PGBD3P0DP91 1061 aa24.03■■□□□ 1.44
CAPRIN1-216ENST00000534042 CDCA7Q9BWT1 371 aaPredicted RBP24.03■■□□□ 1.44
CAPRIN1-216ENST00000534042 PEAK1Q9H792 1746 aa24.02■■□□□ 1.44
CAPRIN1-216ENST00000534042 SBF2Q86WG5 1849 aa24.02■■□□□ 1.44
CAPRIN1-216ENST00000534042 CARD10Q9BWT7 1032 aa24■■□□□ 1.43
CAPRIN1-216ENST00000534042 CARD11Q9BXL7 1154 aa24■■□□□ 1.43
CAPRIN1-216ENST00000534042 WNK3Q9BYP7 1800 aa24■■□□□ 1.43
CAPRIN1-216ENST00000534042 SBNO2Q9Y2G9 1366 aa24■■□□□ 1.43
CAPRIN1-216ENST00000534042 PLSCR1O15162 318 aa23.98■■□□□ 1.43
CAPRIN1-216ENST00000534042 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.98■■□□□ 1.43
CAPRIN1-216ENST00000534042 BCL11BQ9C0K0 894 aaPredicted RBP23.98■■□□□ 1.43
CAPRIN1-216ENST00000534042 NFAT5O94916 1531 aa23.97■■□□□ 1.43
CAPRIN1-216ENST00000534042 MON2Q7Z3U7 1717 aa23.97■■□□□ 1.43
CAPRIN1-216ENST00000534042 MARCH10Q8NA82 808 aaPredicted RBP23.97■■□□□ 1.43
CAPRIN1-216ENST00000534042 TMC1Q8TDI8 760 aa23.95■■□□□ 1.42
CAPRIN1-216ENST00000534042 RGPD3A6NKT7 1758 aaPredicted RBP23.94■■□□□ 1.42
CAPRIN1-216ENST00000534042 RGPD4Q7Z3J3 1758 aa23.94■■□□□ 1.42
CAPRIN1-216ENST00000534042 EXOC5O00471 708 aa23.94■■□□□ 1.42
CAPRIN1-216ENST00000534042 USP31Q70CQ4 1352 aa23.93■■□□□ 1.42
CAPRIN1-216ENST00000534042 CCDC7Q96M83 1385 aa23.93■■□□□ 1.42
CAPRIN1-216ENST00000534042 PTF1AQ7RTS3 328 aa23.93■■□□□ 1.42
CAPRIN1-216ENST00000534042 HDGFL2Q7Z4V5 671 aaPredicted RBP23.93■■□□□ 1.42
CAPRIN1-216ENST00000534042 SPON1Q9HCB6 807 aa23.93■■□□□ 1.42
CAPRIN1-216ENST00000534042 BCL9O00512 1426 aa23.93■■□□□ 1.42
CAPRIN1-216ENST00000534042 NME9Q86XW9 330 aa23.92■■□□□ 1.42
CAPRIN1-216ENST00000534042 ABCC6O95255 1503 aa23.92■■□□□ 1.42
CAPRIN1-216ENST00000534042 TONSLQ96HA7 1378 aa23.91■■□□□ 1.42
CAPRIN1-216ENST00000534042 SLC12A5Q9H2X9 1139 aa23.91■■□□□ 1.42
CAPRIN1-216ENST00000534042 CD163L1Q9NR16 1453 aa23.9■■□□□ 1.42
CAPRIN1-216ENST00000534042 KCNQ2O43526 872 aa23.9■■□□□ 1.42
CAPRIN1-216ENST00000534042 PPP1R1BQ9UD71 204 aaPredicted RBP23.89■■□□□ 1.41
CAPRIN1-216ENST00000534042 USP54Q70EL1 1684 aa23.89■■□□□ 1.41
CAPRIN1-216ENST00000534042 NLRP2Q9NX02 1062 aa23.88■■□□□ 1.41
CAPRIN1-216ENST00000534042 TERF2IPQ9NYB0 399 aa23.88■■□□□ 1.41
CAPRIN1-216ENST00000534042 KAT6BQ8WYB5 2073 aa23.88■■□□□ 1.41
CAPRIN1-216ENST00000534042 ANO8Q9HCE9 1232 aaPredicted RBP23.87■■□□□ 1.41
CAPRIN1-216ENST00000534042 ERBB3P21860 1342 aa23.86■■□□□ 1.41
CAPRIN1-216ENST00000534042 EDC4Q6P2E9 1401 aaKnown RBP23.86■■□□□ 1.41
CAPRIN1-216ENST00000534042 LTN1O94822 1766 aa23.86■■□□□ 1.41
CAPRIN1-216ENST00000534042 PROM2Q8N271 834 aa23.86■■□□□ 1.41
CAPRIN1-216ENST00000534042 PUS7Q96PZ0 661 aaKnown RBP23.86■■□□□ 1.41
CAPRIN1-216ENST00000534042 TNS2Q63HR2 1409 aa23.85■■□□□ 1.41
CAPRIN1-216ENST00000534042 A0A1W2PP64 1363 aa23.83■■□□□ 1.41
CAPRIN1-216ENST00000534042 TXNRD1Q16881 649 aa23.83■■□□□ 1.41
CAPRIN1-216ENST00000534042 ANKRD24Q8TF21 1146 aa23.83■■□□□ 1.41
CAPRIN1-216ENST00000534042 IL2RBP14784 551 aa23.82■■□□□ 1.4
CAPRIN1-216ENST00000534042 STK32BQ9NY57 414 aa23.8■■□□□ 1.4
CAPRIN1-216ENST00000534042 NINLQ9Y2I6 1382 aa23.79■■□□□ 1.4
CAPRIN1-216ENST00000534042 CASZ1Q86V15 1759 aa23.79■■□□□ 1.4
CAPRIN1-216ENST00000534042 ACSBG1Q96GR2 724 aa23.79■■□□□ 1.4
CAPRIN1-216ENST00000534042 DCAF8L1A6NGE4 600 aa23.78■■□□□ 1.4
CAPRIN1-216ENST00000534042 PDGFDQ9GZP0 370 aaPredicted RBP23.78■■□□□ 1.4
CAPRIN1-216ENST00000534042 NHSQ6T4R5 1651 aa23.77■■□□□ 1.4
CAPRIN1-216ENST00000534042 ST20-MTHFSA0A0A6YYL1 179 aa23.77■■□□□ 1.4
CAPRIN1-216ENST00000534042 TESK2Q96S53 571 aa23.77■■□□□ 1.4
CAPRIN1-216ENST00000534042 SLC24A1O60721 1099 aa23.76■■□□□ 1.39
CAPRIN1-216ENST00000534042 ZBTB7AO95365 584 aa23.76■■□□□ 1.39
CAPRIN1-216ENST00000534042 SLC15A2Q16348 729 aa23.76■■□□□ 1.39
CAPRIN1-216ENST00000534042 IP6K1Q92551 441 aa23.76■■□□□ 1.39
CAPRIN1-216ENST00000534042 LTV1Q96GA3 475 aaPredicted RBP23.74■■□□□ 1.39
CAPRIN1-216ENST00000534042 COG3Q96JB2 828 aa23.74■■□□□ 1.39
CAPRIN1-216ENST00000534042 YY1P25490 414 aa23.72■■□□□ 1.39
CAPRIN1-216ENST00000534042 ATF5Q9Y2D1 282 aaPredicted RBP23.72■■□□□ 1.39
CAPRIN1-216ENST00000534042 BTAF1O14981 1849 aa23.7■■□□□ 1.39
CAPRIN1-216ENST00000534042 FAM208AQ9UK61 1670 aaKnown RBP23.7■■□□□ 1.38
CAPRIN1-216ENST00000534042 PTGER2P43116 358 aa23.69■■□□□ 1.38
CAPRIN1-216ENST00000534042 AMPHP49418 695 aa23.69■■□□□ 1.38
CAPRIN1-216ENST00000534042 MAP3K19Q56UN5 1328 aa23.68■■□□□ 1.38
CAPRIN1-216ENST00000534042 DDX54Q8TDD1 881 aaKnown RBP23.68■■□□□ 1.38
CAPRIN1-216ENST00000534042 HOXC9P31274 260 aa23.67■■□□□ 1.38
CAPRIN1-216ENST00000534042 MTFR1LQ9H019 292 aa23.67■■□□□ 1.38
CAPRIN1-216ENST00000534042 ANKRD36BQ8N2N9 1353 aa23.66■■□□□ 1.38
CAPRIN1-216ENST00000534042 FBLN1P23142 703 aa23.66■■□□□ 1.38
CAPRIN1-216ENST00000534042 MYOM1P52179 1685 aa23.66■■□□□ 1.38
CAPRIN1-216ENST00000534042 TMF1P82094 1093 aa23.64■■□□□ 1.37
CAPRIN1-216ENST00000534042 PAPPAQ13219 1627 aa23.62■■□□□ 1.37
CAPRIN1-216ENST00000534042 LRRC4BQ9NT99 713 aa23.62■■□□□ 1.37
CAPRIN1-216ENST00000534042 RGPD2P0DJD1 1756 aa23.62■■□□□ 1.37
CAPRIN1-216ENST00000534042 ZNF827Q17R98 1081 aa23.61■■□□□ 1.37
CAPRIN1-216ENST00000534042 FHDC1Q9C0D6 1143 aaPredicted RBP23.61■■□□□ 1.37
CAPRIN1-216ENST00000534042 USP47Q96K76 1375 aa23.61■■□□□ 1.37
CAPRIN1-216ENST00000534042 FYB1O15117 783 aa23.6■■□□□ 1.37
CAPRIN1-216ENST00000534042 TRIM26Q12899 539 aaPredicted RBP23.6■■□□□ 1.37
CAPRIN1-216ENST00000534042 SLC27A3Q5K4L6 730 aa23.6■■□□□ 1.37
CAPRIN1-216ENST00000534042 ZCRB1Q8TBF4 217 aaKnown RBP23.6■■□□□ 1.37
CAPRIN1-216ENST00000534042 SYTL4Q96C24 671 aaPredicted RBP23.6■■□□□ 1.37
CAPRIN1-216ENST00000534042 SGIP1Q9BQI5 828 aa23.6■■□□□ 1.37
CAPRIN1-216ENST00000534042 SYT17Q9BSW7 474 aa23.6■■□□□ 1.37
CAPRIN1-216ENST00000534042 GGNBP2Q9H3C7 697 aa23.6■■□□□ 1.37
CAPRIN1-216ENST00000534042 RRS1Q15050 365 aaKnown RBP23.59■■□□□ 1.37
CAPRIN1-216ENST00000534042 RTL1A6NKG5 1358 aa23.59■■□□□ 1.37
CAPRIN1-216ENST00000534042 PRIM1P49642 420 aaKnown RBP23.58■■□□□ 1.37
CAPRIN1-216ENST00000534042 CDCA8Q53HL2 280 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms