RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-223ENST00000533979 ZIC2O95409 532 aaPredicted RBP9.59□□□□□ -0.87
ATM-223ENST00000533979 MCCD1P59942 119 aaPredicted RBP9.59□□□□□ -0.87
ATM-223ENST00000533979 DZIP3Q86Y13 1208 aaKnown RBP9.59□□□□□ -0.87
ATM-223ENST00000533979 CCDC116Q8IYX3 515 aa9.59□□□□□ -0.87
ATM-223ENST00000533979 TRIM46Q7Z4K8 759 aa9.58□□□□□ -0.88
ATM-223ENST00000533979 ITPKCQ96DU7 683 aa9.58□□□□□ -0.88
ATM-223ENST00000533979 TRIM47Q96LD4 638 aa9.58□□□□□ -0.88
ATM-223ENST00000533979 NDUFB9Q9Y6M9 179 aa9.58□□□□□ -0.88
ATM-223ENST00000533979 FSHRP23945 695 aa9.57□□□□□ -0.88
ATM-223ENST00000533979 DHX9Q08211 1270 aaKnown RBP9.57□□□□□ -0.88
ATM-223ENST00000533979 TMEM132AQ24JP5 1023 aa9.56□□□□□ -0.88
ATM-223ENST00000533979 NBPF20Q3BBV1 942 aa9.56□□□□□ -0.88
ATM-223ENST00000533979 ZNF775Q96BV0 537 aaPredicted RBP9.56□□□□□ -0.88
ATM-223ENST00000533979 ZFAND3Q9H8U3 227 aa9.56□□□□□ -0.88
ATM-223ENST00000533979 FBXO45P0C2W1 286 aa9.55□□□□□ -0.88
ATM-223ENST00000533979 NR1H3Q13133 447 aa9.55□□□□□ -0.88
ATM-223ENST00000533979 SCARF1Q14162 830 aa9.55□□□□□ -0.88
ATM-223ENST00000533979 PPP1R26Q5T8A7 1209 aaPredicted RBP9.55□□□□□ -0.88
ATM-223ENST00000533979 MRPL14Q6P1L8 145 aaKnown RBP9.55□□□□□ -0.88
ATM-223ENST00000533979 CCDC125Q86Z20 511 aa9.55□□□□□ -0.88
ATM-223ENST00000533979 ZNF592Q92610 1267 aa9.55□□□□□ -0.88
ATM-223ENST00000533979 PGPEP1Q9NXJ5 209 aa9.55□□□□□ -0.88
ATM-223ENST00000533979 ESPNB1AK53 854 aa9.54□□□□□ -0.88
ATM-223ENST00000533979 SNRPBP14678 240 aaKnown RBP9.54□□□□□ -0.88
ATM-223ENST00000533979 ZFP42Q96MM3 310 aa9.54□□□□□ -0.88
ATM-223ENST00000533979 ZNF330Q9Y3S2 320 aaPredicted RBP9.54□□□□□ -0.88
ATM-223ENST00000533979 INTS6LQ5JSJ4 861 aaKnown RBP9.53□□□□□ -0.88
ATM-223ENST00000533979 SEPT12Q8IYM1 358 aa9.53□□□□□ -0.88
ATM-223ENST00000533979 GPR37L1O60883 481 aa9.52□□□□□ -0.89
ATM-223ENST00000533979 BMP1P13497 986 aa9.52□□□□□ -0.89
ATM-223ENST00000533979 Q6ZVU0 165 aa9.52□□□□□ -0.89
ATM-223ENST00000533979 TRIM52Q96A61 297 aa9.52□□□□□ -0.89
ATM-223ENST00000533979 UPP2O95045 317 aa9.51□□□□□ -0.89
ATM-223ENST00000533979 TSEN34Q9BSV6 310 aaKnown RBP9.51□□□□□ -0.89
ATM-223ENST00000533979 MEIOBQ8N635 442 aa9.5□□□□□ -0.89
ATM-223ENST00000533979 PCDHB9Q9Y5E1 797 aa9.5□□□□□ -0.89
ATM-223ENST00000533979 GIGYF1O75420 1035 aaPredicted RBP9.49□□□□□ -0.89
ATM-223ENST00000533979 RNF20Q5VTR2 975 aa9.49□□□□□ -0.89
ATM-223ENST00000533979 PURBQ96QR8 312 aaKnown RBP9.49□□□□□ -0.89
ATM-223ENST00000533979 TBC1D2BQ9UPU7 963 aa9.49□□□□□ -0.89
ATM-223ENST00000533979 ERVH48-1M5A8F1 160 aa9.48□□□□□ -0.89
ATM-223ENST00000533979 BMP2P12643 396 aa9.46□□□□□ -0.9
ATM-223ENST00000533979 CBLBQ13191 982 aa9.46□□□□□ -0.9
ATM-223ENST00000533979 IRF5Q13568 498 aa9.46□□□□□ -0.9
ATM-223ENST00000533979 LINC00528Q8N1L1 170 aa9.46□□□□□ -0.9
ATM-223ENST00000533979 TMPRSS4Q9NRS4 437 aa9.46□□□□□ -0.9
ATM-223ENST00000533979 FLIIQ13045 1269 aa9.45□□□□□ -0.9
ATM-223ENST00000533979 MCM6Q14566 821 aa9.45□□□□□ -0.9
ATM-223ENST00000533979 WASHC4Q2M389 1173 aa9.45□□□□□ -0.9
ATM-223ENST00000533979 TREML4Q6UXN2 200 aa9.45□□□□□ -0.9
ATM-223ENST00000533979 GDPD2Q9HCC8 539 aa9.45□□□□□ -0.9
ATM-223ENST00000533979 CEP126Q9P2H0 1117 aa9.45□□□□□ -0.9
ATM-223ENST00000533979 LILRA1O75019 489 aa9.44□□□□□ -0.9
ATM-223ENST00000533979 ADD1P35611 737 aaKnown RBP9.44□□□□□ -0.9
ATM-223ENST00000533979 RAB15P59190 212 aa9.44□□□□□ -0.9
ATM-223ENST00000533979 EIF4G2P78344 907 aaKnown RBP eCLIP9.44□□□□□ -0.9
ATM-223ENST00000533979 C6orf118Q5T5N4 469 aa9.44□□□□□ -0.9
ATM-223ENST00000533979 ZNF784Q8NCA9 323 aaPredicted RBP9.43□□□□□ -0.9
ATM-223ENST00000533979 SOS2Q07890 1332 aaPredicted RBP9.42□□□□□ -0.9
ATM-223ENST00000533979 TERTO14746 1132 aaKnown RBP9.42□□□□□ -0.9
ATM-223ENST00000533979 SPINT1O43278 529 aa9.42□□□□□ -0.9
ATM-223ENST00000533979 NPAS3Q8IXF0 933 aa9.42□□□□□ -0.9
ATM-223ENST00000533979 NXF1Q9UBU9 619 aaKnown RBP9.42□□□□□ -0.9
ATM-223ENST00000533979 ABL2P42684 1182 aa9.41□□□□□ -0.9
ATM-223ENST00000533979 LCE2AQ5TA79 106 aaPredicted RBP9.4□□□□□ -0.9
ATM-223ENST00000533979 COG6Q9Y2V7 657 aa9.4□□□□□ -0.9
ATM-223ENST00000533979 MAN1A2O60476 641 aa9.39□□□□□ -0.91
ATM-223ENST00000533979 WFS1O76024 890 aa9.39□□□□□ -0.91
ATM-223ENST00000533979 PTGIRP43119 386 aa9.39□□□□□ -0.91
ATM-223ENST00000533979 NFX1Q12986 1120 aaKnown RBP9.39□□□□□ -0.91
ATM-223ENST00000533979 PHTF2Q8N3S3 785 aa9.39□□□□□ -0.91
ATM-223ENST00000533979 TTLL8A6PVC2 850 aa9.38□□□□□ -0.91
ATM-223ENST00000533979 ADH1AP07327 375 aa9.38□□□□□ -0.91
ATM-223ENST00000533979 ERVK-9P63128 1117 aa9.38□□□□□ -0.91
ATM-223ENST00000533979 KDF1Q8NAX2 398 aaPredicted RBP9.38□□□□□ -0.91
ATM-223ENST00000533979 AGBL1Q96MI9 1066 aa9.38□□□□□ -0.91
ATM-223ENST00000533979 RAD21O60216 631 aa9.37□□□□□ -0.91
ATM-223ENST00000533979 SOX11P35716 441 aa9.37□□□□□ -0.91
ATM-223ENST00000533979 RELBQ01201 579 aa9.37□□□□□ -0.91
ATM-223ENST00000533979 VAC14Q08AM6 782 aa9.37□□□□□ -0.91
ATM-223ENST00000533979 CC2D2BQ6DHV5 1058 aa9.37□□□□□ -0.91
ATM-223ENST00000533979 SLC16A10Q8TF71 515 aa9.37□□□□□ -0.91
ATM-223ENST00000533979 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.36□□□□□ -0.91
ATM-223ENST00000533979 WWC1Q8IX03 1113 aa9.36□□□□□ -0.91
ATM-223ENST00000533979 ZNF395Q9H8N7 513 aaPredicted RBP9.36□□□□□ -0.91
ATM-223ENST00000533979 CYLDQ9NQC7 956 aa9.36□□□□□ -0.91
ATM-223ENST00000533979 SEMA3FQ13275 785 aa9.35□□□□□ -0.91
ATM-223ENST00000533979 ESF1Q9H501 851 aaKnown RBP9.35□□□□□ -0.91
ATM-223ENST00000533979 DNMT3LQ9UJW3 386 aa9.35□□□□□ -0.91
ATM-223ENST00000533979 CHIC2Q9UKJ5 165 aa9.35□□□□□ -0.91
ATM-223ENST00000533979 PCDHB11Q9Y5F2 797 aa9.35□□□□□ -0.91
ATM-223ENST00000533979 SOBPA7XYQ1 873 aa9.34□□□□□ -0.91
ATM-223ENST00000533979 ATP5J2-PTCD1G3V325 749 aa9.34□□□□□ -0.91
ATM-223ENST00000533979 SLFNL1Q499Z3 407 aa9.34□□□□□ -0.91
ATM-223ENST00000533979 INSM2Q96T92 566 aaPredicted RBP9.34□□□□□ -0.91
ATM-223ENST00000533979 FIGNL2A6NMB9 653 aa9.33□□□□□ -0.92
ATM-223ENST00000533979 TRAK2O60296 914 aa9.33□□□□□ -0.92
ATM-223ENST00000533979 UBTFP17480 764 aaKnown RBP9.33□□□□□ -0.92
ATM-223ENST00000533979 CTSOP43234 321 aaPredicted RBP9.33□□□□□ -0.92
ATM-223ENST00000533979 USP4Q13107 963 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms