RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 NBPF14Q5TI25 921 aa25.83■■□□□ 1.73
UBXN1-216ENST00000533908 MARCH10Q8NA82 808 aaPredicted RBP25.83■■□□□ 1.73
UBXN1-216ENST00000533908 OVOS2A0A0G2JMS6 1433 aa25.82■■□□□ 1.72
UBXN1-216ENST00000533908 OVOS2A0A0J9YW53 1432 aa25.82■■□□□ 1.72
UBXN1-216ENST00000533908 OVOS2Q6IE36 1432 aa25.82■■□□□ 1.72
UBXN1-216ENST00000533908 KCNH5Q8NCM2 988 aa25.82■■□□□ 1.72
UBXN1-216ENST00000533908 RGPD5Q99666 1765 aa25.82■■□□□ 1.72
UBXN1-216ENST00000533908 C11orf95C9JLR9 678 aaPredicted RBP25.81■■□□□ 1.72
UBXN1-216ENST00000533908 TTC21AQ8NDW8 1320 aa25.81■■□□□ 1.72
UBXN1-216ENST00000533908 SBF2Q86WG5 1849 aa25.8■■□□□ 1.72
UBXN1-216ENST00000533908 KTN1Q86UP2 1357 aaKnown RBP25.8■■□□□ 1.72
UBXN1-216ENST00000533908 PLSCR1O15162 318 aa25.79■■□□□ 1.72
UBXN1-216ENST00000533908 CARD10Q9BWT7 1032 aa25.78■■□□□ 1.72
UBXN1-216ENST00000533908 NFAT5O94916 1531 aa25.78■■□□□ 1.72
UBXN1-216ENST00000533908 PROM2Q8N271 834 aa25.77■■□□□ 1.72
UBXN1-216ENST00000533908 BCL11BQ9C0K0 894 aaPredicted RBP25.77■■□□□ 1.72
UBXN1-216ENST00000533908 CSB-PGBD3P0DP91 1061 aa25.76■■□□□ 1.71
UBXN1-216ENST00000533908 WNK3Q9BYP7 1800 aa25.75■■□□□ 1.71
UBXN1-216ENST00000533908 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.75■■□□□ 1.71
UBXN1-216ENST00000533908 CDCA7Q9BWT1 371 aaPredicted RBP25.75■■□□□ 1.71
UBXN1-216ENST00000533908 CD163L1Q9NR16 1453 aa25.74■■□□□ 1.71
UBXN1-216ENST00000533908 ANO8Q9HCE9 1232 aaPredicted RBP25.74■■□□□ 1.71
UBXN1-216ENST00000533908 SBNO2Q9Y2G9 1366 aa25.73■■□□□ 1.71
UBXN1-216ENST00000533908 NME9Q86XW9 330 aa25.73■■□□□ 1.71
UBXN1-216ENST00000533908 BCL9O00512 1426 aa25.72■■□□□ 1.71
UBXN1-216ENST00000533908 USP31Q70CQ4 1352 aa25.72■■□□□ 1.71
UBXN1-216ENST00000533908 MON2Q7Z3U7 1717 aa25.72■■□□□ 1.71
UBXN1-216ENST00000533908 CARD11Q9BXL7 1154 aa25.72■■□□□ 1.71
UBXN1-216ENST00000533908 KCNQ2O43526 872 aa25.71■■□□□ 1.71
UBXN1-216ENST00000533908 PDGFDQ9GZP0 370 aaPredicted RBP25.71■■□□□ 1.71
UBXN1-216ENST00000533908 SLC12A5Q9H2X9 1139 aa25.71■■□□□ 1.71
UBXN1-216ENST00000533908 SPON1Q9HCB6 807 aa25.71■■□□□ 1.71
UBXN1-216ENST00000533908 EXOC5O00471 708 aa25.7■■□□□ 1.7
UBXN1-216ENST00000533908 RGPD3A6NKT7 1758 aaPredicted RBP25.69■■□□□ 1.7
UBXN1-216ENST00000533908 RGPD4Q7Z3J3 1758 aa25.69■■□□□ 1.7
UBXN1-216ENST00000533908 TMC1Q8TDI8 760 aa25.68■■□□□ 1.7
UBXN1-216ENST00000533908 CCDC7Q96M83 1385 aa25.67■■□□□ 1.7
UBXN1-216ENST00000533908 TXNRD1Q16881 649 aa25.65■■□□□ 1.7
UBXN1-216ENST00000533908 ABCC6O95255 1503 aa25.64■■□□□ 1.7
UBXN1-216ENST00000533908 USP54Q70EL1 1684 aa25.64■■□□□ 1.69
UBXN1-216ENST00000533908 ERBB3P21860 1342 aa25.63■■□□□ 1.69
UBXN1-216ENST00000533908 NLRP2Q9NX02 1062 aa25.63■■□□□ 1.69
UBXN1-216ENST00000533908 HDGFL2Q7Z4V5 671 aaPredicted RBP25.62■■□□□ 1.69
UBXN1-216ENST00000533908 PPP1R1BQ9UD71 204 aaPredicted RBP25.62■■□□□ 1.69
UBXN1-216ENST00000533908 TNS2Q63HR2 1409 aa25.62■■□□□ 1.69
UBXN1-216ENST00000533908 CASZ1Q86V15 1759 aa25.61■■□□□ 1.69
UBXN1-216ENST00000533908 ANKRD24Q8TF21 1146 aa25.6■■□□□ 1.69
UBXN1-216ENST00000533908 ACSBG1Q96GR2 724 aa25.6■■□□□ 1.69
UBXN1-216ENST00000533908 A0A1W2PP64 1363 aa25.59■■□□□ 1.69
UBXN1-216ENST00000533908 EDC4Q6P2E9 1401 aaKnown RBP25.59■■□□□ 1.69
UBXN1-216ENST00000533908 LTN1O94822 1766 aa25.59■■□□□ 1.69
UBXN1-216ENST00000533908 ZBTB7AO95365 584 aa25.58■■□□□ 1.69
UBXN1-216ENST00000533908 IL2RBP14784 551 aa25.57■■□□□ 1.68
UBXN1-216ENST00000533908 PUS7Q96PZ0 661 aaKnown RBP25.57■■□□□ 1.68
UBXN1-216ENST00000533908 TESK2Q96S53 571 aa25.57■■□□□ 1.68
UBXN1-216ENST00000533908 TERF2IPQ9NYB0 399 aa25.57■■□□□ 1.68
UBXN1-216ENST00000533908 TONSLQ96HA7 1378 aa25.56■■□□□ 1.68
UBXN1-216ENST00000533908 PTGER2P43116 358 aa25.56■■□□□ 1.68
UBXN1-216ENST00000533908 SLC15A2Q16348 729 aa25.56■■□□□ 1.68
UBXN1-216ENST00000533908 STK32BQ9NY57 414 aa25.55■■□□□ 1.68
UBXN1-216ENST00000533908 ATF5Q9Y2D1 282 aaPredicted RBP25.55■■□□□ 1.68
UBXN1-216ENST00000533908 NINLQ9Y2I6 1382 aa25.55■■□□□ 1.68
UBXN1-216ENST00000533908 NHSQ6T4R5 1651 aa25.53■■□□□ 1.68
UBXN1-216ENST00000533908 ST20-MTHFSA0A0A6YYL1 179 aa25.53■■□□□ 1.68
UBXN1-216ENST00000533908 FBLN1P23142 703 aa25.53■■□□□ 1.68
UBXN1-216ENST00000533908 IP6K1Q92551 441 aa25.53■■□□□ 1.68
UBXN1-216ENST00000533908 YY1P25490 414 aa25.52■■□□□ 1.68
UBXN1-216ENST00000533908 LTV1Q96GA3 475 aaPredicted RBP25.5■■□□□ 1.67
UBXN1-216ENST00000533908 SGIP1Q9BQI5 828 aa25.47■■□□□ 1.67
UBXN1-216ENST00000533908 LRRC4BQ9NT99 713 aa25.47■■□□□ 1.67
UBXN1-216ENST00000533908 MYOM1P52179 1685 aa25.47■■□□□ 1.67
UBXN1-216ENST00000533908 MAP3K19Q56UN5 1328 aa25.46■■□□□ 1.67
UBXN1-216ENST00000533908 BTAF1O14981 1849 aa25.46■■□□□ 1.67
UBXN1-216ENST00000533908 DDX54Q8TDD1 881 aaKnown RBP25.45■■□□□ 1.66
UBXN1-216ENST00000533908 HOXC9P31274 260 aa25.44■■□□□ 1.66
UBXN1-216ENST00000533908 ZNF827Q17R98 1081 aa25.44■■□□□ 1.66
UBXN1-216ENST00000533908 COG3Q96JB2 828 aa25.44■■□□□ 1.66
UBXN1-216ENST00000533908 PAPPAQ13219 1627 aa25.44■■□□□ 1.66
UBXN1-216ENST00000533908 MTFR1LQ9H019 292 aa25.43■■□□□ 1.66
UBXN1-216ENST00000533908 KAT6BQ8WYB5 2073 aa25.42■■□□□ 1.66
UBXN1-216ENST00000533908 DCAF8L1A6NGE4 600 aa25.42■■□□□ 1.66
UBXN1-216ENST00000533908 SYT17Q9BSW7 474 aa25.42■■□□□ 1.66
UBXN1-216ENST00000533908 FHDC1Q9C0D6 1143 aaPredicted RBP25.42■■□□□ 1.66
UBXN1-216ENST00000533908 AMPHP49418 695 aa25.39■■□□□ 1.66
UBXN1-216ENST00000533908 FYB1O15117 783 aa25.38■■□□□ 1.65
UBXN1-216ENST00000533908 PRIM1P49642 420 aaKnown RBP25.38■■□□□ 1.65
UBXN1-216ENST00000533908 AKT1S1Q96B36 256 aa25.38■■□□□ 1.65
UBXN1-216ENST00000533908 RGPD2P0DJD1 1756 aa25.38■■□□□ 1.65
UBXN1-216ENST00000533908 FAM208AQ9UK61 1670 aaKnown RBP25.37■■□□□ 1.65
UBXN1-216ENST00000533908 ANKRD36BQ8N2N9 1353 aa25.37■■□□□ 1.65
UBXN1-216ENST00000533908 KCNQ4P56696 695 aa25.37■■□□□ 1.65
UBXN1-216ENST00000533908 RRS1Q15050 365 aaKnown RBP25.36■■□□□ 1.65
UBXN1-216ENST00000533908 GGNBP2Q9H3C7 697 aa25.36■■□□□ 1.65
UBXN1-216ENST00000533908 SLC24A1O60721 1099 aa25.35■■□□□ 1.65
UBXN1-216ENST00000533908 NBPF6Q5VWK0 638 aa25.35■■□□□ 1.65
UBXN1-216ENST00000533908 NBPF4Q96M43 638 aa25.35■■□□□ 1.65
UBXN1-216ENST00000533908 MEGF6O75095 1541 aa25.34■■□□□ 1.65
UBXN1-216ENST00000533908 ZCRB1Q8TBF4 217 aaKnown RBP25.34■■□□□ 1.65
UBXN1-216ENST00000533908 ARXQ96QS3 562 aa25.34■■□□□ 1.65
UBXN1-216ENST00000533908 NSD2O96028 1365 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms