RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 CRB1P82279 1406 aa16.02■□□□□ 0.15
CSDE1-215ENST00000533818 ADCY9O60503 1353 aa16.01■□□□□ 0.15
CSDE1-215ENST00000533818 ZNF827Q17R98 1081 aa16.01■□□□□ 0.15
CSDE1-215ENST00000533818 PIK3C2GO75747 1445 aa16.01■□□□□ 0.15
CSDE1-215ENST00000533818 CPDO75976 1380 aa16■□□□□ 0.15
CSDE1-215ENST00000533818 EIF3AQ14152 1382 aaKnown RBP16■□□□□ 0.15
CSDE1-215ENST00000533818 C14orf93Q9H972 538 aaKnown RBP16■□□□□ 0.15
CSDE1-215ENST00000533818 PHRF1Q9P1Y6 1649 aaKnown RBP15.99■□□□□ 0.15
CSDE1-215ENST00000533818 COL5A2P05997 1499 aaPredicted RBP15.98■□□□□ 0.15
CSDE1-215ENST00000533818 JMYQ8N9B5 988 aa15.98■□□□□ 0.15
CSDE1-215ENST00000533818 MINK1Q8N4C8 1332 aaPredicted RBP15.97■□□□□ 0.15
CSDE1-215ENST00000533818 WASLO00401 505 aaPredicted RBP15.97■□□□□ 0.15
CSDE1-215ENST00000533818 CFAP70Q5T0N1 1121 aa15.97■□□□□ 0.15
CSDE1-215ENST00000533818 TOM1L2Q6ZVM7 507 aa15.97■□□□□ 0.15
CSDE1-215ENST00000533818 KLRG1Q96E93 195 aa15.97■□□□□ 0.15
CSDE1-215ENST00000533818 LRRC37A3O60309 1634 aa15.97■□□□□ 0.15
CSDE1-215ENST00000533818 LMO7Q8WWI1 1683 aa15.96■□□□□ 0.15
CSDE1-215ENST00000533818 ABTB2Q8N961 1025 aa15.96■□□□□ 0.15
CSDE1-215ENST00000533818 CDCA7Q9BWT1 371 aaPredicted RBP15.96■□□□□ 0.15
CSDE1-215ENST00000533818 SLC4A1APQ9BWU0 796 aaKnown RBP15.96■□□□□ 0.15
CSDE1-215ENST00000533818 WWC3Q9ULE0 1092 aa15.96■□□□□ 0.15
CSDE1-215ENST00000533818 ZBTB7CA1YPR0 619 aa15.95■□□□□ 0.14
CSDE1-215ENST00000533818 TOMM70O94826 608 aa15.95■□□□□ 0.14
CSDE1-215ENST00000533818 GCP02774 474 aa15.95■□□□□ 0.14
CSDE1-215ENST00000533818 TULP4Q9NRJ4 1543 aa15.94■□□□□ 0.14
CSDE1-215ENST00000533818 EXOC5O00471 708 aa15.93■□□□□ 0.14
CSDE1-215ENST00000533818 AKT1S1Q96B36 256 aa15.93■□□□□ 0.14
CSDE1-215ENST00000533818 LRRC4BQ9NT99 713 aa15.93■□□□□ 0.14
CSDE1-215ENST00000533818 HTRA3P83110 453 aa15.92■□□□□ 0.14
CSDE1-215ENST00000533818 ACSBG1Q96GR2 724 aa15.92■□□□□ 0.14
CSDE1-215ENST00000533818 SPATA31E1Q6ZUB1 1445 aa15.92■□□□□ 0.14
CSDE1-215ENST00000533818 USP19O94966 1318 aa15.92■□□□□ 0.14
CSDE1-215ENST00000533818 PNPLA7Q6ZV29 1317 aa15.92■□□□□ 0.14
CSDE1-215ENST00000533818 NLRP13Q86W25 1043 aa15.91■□□□□ 0.14
CSDE1-215ENST00000533818 NUDT16Q96DE0 195 aaKnown RBP15.91■□□□□ 0.14
CSDE1-215ENST00000533818 PAPPAQ13219 1627 aa15.9■□□□□ 0.14
CSDE1-215ENST00000533818 TFCP2L1Q9NZI6 479 aa15.9■□□□□ 0.14
CSDE1-215ENST00000533818 TRAK1Q9UPV9 953 aa15.9■□□□□ 0.14
CSDE1-215ENST00000533818 TOPAZ1Q8N9V7 1692 aa15.89■□□□□ 0.13
CSDE1-215ENST00000533818 ACEP12821 1306 aa15.87■□□□□ 0.13
CSDE1-215ENST00000533818 WDR17Q8IZU2 1322 aa15.87■□□□□ 0.13
CSDE1-215ENST00000533818 BRD4O60885 1362 aaPredicted RBP15.87■□□□□ 0.13
CSDE1-215ENST00000533818 CD2APQ9Y5K6 639 aa15.86■□□□□ 0.13
CSDE1-215ENST00000533818 MSH5O43196 834 aa15.85■□□□□ 0.13
CSDE1-215ENST00000533818 AKAP12Q02952 1782 aa15.85■□□□□ 0.13
CSDE1-215ENST00000533818 USP6P35125 1406 aa15.85■□□□□ 0.13
CSDE1-215ENST00000533818 SLC27A3Q5K4L6 730 aa15.84■□□□□ 0.13
CSDE1-215ENST00000533818 CARD10Q9BWT7 1032 aa15.84■□□□□ 0.13
CSDE1-215ENST00000533818 COL24A1Q17RW2 1714 aa15.84■□□□□ 0.13
CSDE1-215ENST00000533818 POLR3AO14802 1390 aaPredicted RBP15.84■□□□□ 0.13
CSDE1-215ENST00000533818 PCNTO95613 3336 aa15.83■□□□□ 0.13
CSDE1-215ENST00000533818 AXIN2Q9Y2T1 843 aa15.83■□□□□ 0.12
CSDE1-215ENST00000533818 WDR90Q96KV7 1748 aa15.82■□□□□ 0.12
CSDE1-215ENST00000533818 CSB-PGBD3P0DP91 1061 aa15.82■□□□□ 0.12
CSDE1-215ENST00000533818 RBM46Q8TBY0 533 aaKnown RBP15.82■□□□□ 0.12
CSDE1-215ENST00000533818 HSPA1AP0DMV8 641 aaKnown RBP15.81■□□□□ 0.12
CSDE1-215ENST00000533818 HSPA1BP0DMV9 641 aaKnown RBP15.81■□□□□ 0.12
CSDE1-215ENST00000533818 MSL1Q68DK7 614 aa15.81■□□□□ 0.12
CSDE1-215ENST00000533818 NHSQ6T4R5 1651 aa15.8■□□□□ 0.12
CSDE1-215ENST00000533818 KCNQ4P56696 695 aa15.8■□□□□ 0.12
CSDE1-215ENST00000533818 C16orf71Q8IYS4 520 aaPredicted RBP15.8■□□□□ 0.12
CSDE1-215ENST00000533818 NMRK2Q9NPI5 230 aa15.8■□□□□ 0.12
CSDE1-215ENST00000533818 CCDC61Q9Y6R9 512 aa15.8■□□□□ 0.12
CSDE1-215ENST00000533818 PLEKHG3A1L390 1219 aa15.79■□□□□ 0.12
CSDE1-215ENST00000533818 CDK19Q9BWU1 502 aa15.79■□□□□ 0.12
CSDE1-215ENST00000533818 NLRP6P59044 892 aa15.78■□□□□ 0.12
CSDE1-215ENST00000533818 FSTL1Q12841 308 aa15.78■□□□□ 0.12
CSDE1-215ENST00000533818 COL23A1Q86Y22 540 aaPredicted RBP15.78■□□□□ 0.12
CSDE1-215ENST00000533818 TNS2Q63HR2 1409 aa15.77■□□□□ 0.12
CSDE1-215ENST00000533818 ITSN1Q15811 1721 aa15.77■□□□□ 0.11
CSDE1-215ENST00000533818 QSER1Q2KHR3 1735 aa15.77■□□□□ 0.11
CSDE1-215ENST00000533818 ARHGEF28Q8N1W1 1705 aaKnown RBP15.77■□□□□ 0.11
CSDE1-215ENST00000533818 IGSF1Q8N6C5 1336 aa15.76■□□□□ 0.11
CSDE1-215ENST00000533818 WNK3Q9BYP7 1800 aa15.75■□□□□ 0.11
CSDE1-215ENST00000533818 CCDC7Q96M83 1385 aa15.75■□□□□ 0.11
CSDE1-215ENST00000533818 BTAF1O14981 1849 aa15.74■□□□□ 0.11
CSDE1-215ENST00000533818 ADGRB1O14514 1584 aa15.73■□□□□ 0.11
CSDE1-215ENST00000533818 PPIP5K1Q6PFW1 1433 aa15.71■□□□□ 0.11
CSDE1-215ENST00000533818 FAM161AQ3B820 660 aa15.71■□□□□ 0.11
CSDE1-215ENST00000533818 ARHGEF25Q86VW2 580 aa15.71■□□□□ 0.11
CSDE1-215ENST00000533818 COL18A1P39060 1754 aa15.7■□□□□ 0.1
CSDE1-215ENST00000533818 CPSF1Q10570 1443 aaKnown RBP15.69■□□□□ 0.1
CSDE1-215ENST00000533818 ABCC6O95255 1503 aa15.68■□□□□ 0.1
CSDE1-215ENST00000533818 TUBGCP6Q96RT7 1819 aa15.68■□□□□ 0.1
CSDE1-215ENST00000533818 IL2RBP14784 551 aa15.68■□□□□ 0.1
CSDE1-215ENST00000533818 SYTL4Q96C24 671 aaPredicted RBP15.68■□□□□ 0.1
CSDE1-215ENST00000533818 CCNL1Q9UK58 526 aaPredicted RBP15.68■□□□□ 0.1
CSDE1-215ENST00000533818 SLIT3O75094 1523 aa15.68■□□□□ 0.1
CSDE1-215ENST00000533818 SOX12O15370 315 aa15.67■□□□□ 0.1
CSDE1-215ENST00000533818 KAT6BQ8WYB5 2073 aa15.67■□□□□ 0.1
CSDE1-215ENST00000533818 TRPM1Q7Z4N2 1603 aa15.66■□□□□ 0.1
CSDE1-215ENST00000533818 MPHOSPH9Q99550 1183 aa15.66■□□□□ 0.1
CSDE1-215ENST00000533818 NLRP2Q9NX02 1062 aa15.66■□□□□ 0.1
CSDE1-215ENST00000533818 PRIM1P49642 420 aaKnown RBP15.65■□□□□ 0.1
CSDE1-215ENST00000533818 ARHGAP27Q6ZUM4 889 aa15.65■□□□□ 0.1
CSDE1-215ENST00000533818 KCNH5Q8NCM2 988 aa15.65■□□□□ 0.1
CSDE1-215ENST00000533818 SMC1BQ8NDV3 1235 aa15.65■□□□□ 0.1
CSDE1-215ENST00000533818 FLAD1Q8NFF5 587 aa15.65■□□□□ 0.1
CSDE1-215ENST00000533818 DDX54Q8TDD1 881 aaKnown RBP15.64■□□□□ 0.09
CSDE1-215ENST00000533818 RRAGCQ9HB90 399 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms