RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 RGPD5Q99666 1765 aa13.45□□□□□ -0.26
PACS1-214ENST00000533811 STK32BQ9NY57 414 aa13.44□□□□□ -0.26
PACS1-214ENST00000533811 AATKQ6ZMQ8 1374 aa13.44□□□□□ -0.26
PACS1-214ENST00000533811 QRICH2Q9H0J4 1663 aa13.44□□□□□ -0.26
PACS1-214ENST00000533811 SOX12O15370 315 aa13.43□□□□□ -0.26
PACS1-214ENST00000533811 CSB-PGBD3P0DP91 1061 aa13.43□□□□□ -0.26
PACS1-214ENST00000533811 NBPF1Q3BBV0 1214 aa13.43□□□□□ -0.26
PACS1-214ENST00000533811 MARCH10Q8NA82 808 aaPredicted RBP13.43□□□□□ -0.26
PACS1-214ENST00000533811 SLIT3O75094 1523 aa13.43□□□□□ -0.26
PACS1-214ENST00000533811 KAT6BQ8WYB5 2073 aa13.43□□□□□ -0.26
PACS1-214ENST00000533811 CHD4Q14839 1912 aa13.43□□□□□ -0.26
PACS1-214ENST00000533811 CENPJQ9HC77 1338 aaPredicted RBP13.42□□□□□ -0.26
PACS1-214ENST00000533811 USP6P35125 1406 aa13.42□□□□□ -0.26
PACS1-214ENST00000533811 ZNF784Q8NCA9 323 aaPredicted RBP13.42□□□□□ -0.26
PACS1-214ENST00000533811 CABP1Q9NZU7 370 aa13.42□□□□□ -0.26
PACS1-214ENST00000533811 PIK3C2AO00443 1686 aa13.42□□□□□ -0.26
PACS1-214ENST00000533811 COL18A1P39060 1754 aa13.42□□□□□ -0.26
PACS1-214ENST00000533811 WDR17Q8IZU2 1322 aa13.41□□□□□ -0.26
PACS1-214ENST00000533811 PTGER2P43116 358 aa13.41□□□□□ -0.26
PACS1-214ENST00000533811 TXNRD1Q16881 649 aa13.41□□□□□ -0.26
PACS1-214ENST00000533811 PROM2Q8N271 834 aa13.41□□□□□ -0.26
PACS1-214ENST00000533811 FHDC1Q9C0D6 1143 aaPredicted RBP13.41□□□□□ -0.26
PACS1-214ENST00000533811 BRD4O60885 1362 aaPredicted RBP13.41□□□□□ -0.26
PACS1-214ENST00000533811 AXIN2Q9Y2T1 843 aa13.4□□□□□ -0.26
PACS1-214ENST00000533811 SENP3-EIF4A1A0A087X0R7 540 aa13.39□□□□□ -0.27
PACS1-214ENST00000533811 SLC15A2Q16348 729 aa13.39□□□□□ -0.27
PACS1-214ENST00000533811 SYT17Q9BSW7 474 aa13.39□□□□□ -0.27
PACS1-214ENST00000533811 CDCA7Q9BWT1 371 aaPredicted RBP13.39□□□□□ -0.27
PACS1-214ENST00000533811 CPSF1Q10570 1443 aaKnown RBP13.39□□□□□ -0.27
PACS1-214ENST00000533811 EXOC5O00471 708 aa13.37□□□□□ -0.27
PACS1-214ENST00000533811 ACSBG1Q96GR2 724 aa13.37□□□□□ -0.27
PACS1-214ENST00000533811 MTFR1LQ9H019 292 aa13.37□□□□□ -0.27
PACS1-214ENST00000533811 CARD10Q9BWT7 1032 aa13.36□□□□□ -0.27
PACS1-214ENST00000533811 NHSQ6T4R5 1651 aa13.35□□□□□ -0.27
PACS1-214ENST00000533811 ARHGEF25Q86VW2 580 aa13.35□□□□□ -0.27
PACS1-214ENST00000533811 KLHL34Q8N239 644 aa13.35□□□□□ -0.27
PACS1-214ENST00000533811 KCNH5Q8NCM2 988 aa13.35□□□□□ -0.27
PACS1-214ENST00000533811 BCL9O00512 1426 aa13.35□□□□□ -0.27
PACS1-214ENST00000533811 TNS2Q63HR2 1409 aa13.35□□□□□ -0.27
PACS1-214ENST00000533811 TTC21BQ7Z4L5 1316 aa13.35□□□□□ -0.27
PACS1-214ENST00000533811 ARXQ96QS3 562 aa13.34□□□□□ -0.27
PACS1-214ENST00000533811 EVC2Q86UK5 1308 aa13.34□□□□□ -0.27
PACS1-214ENST00000533811 CCDC7Q96M83 1385 aa13.33□□□□□ -0.27
PACS1-214ENST00000533811 TRPM1Q7Z4N2 1603 aa13.33□□□□□ -0.28
PACS1-214ENST00000533811 C1QTNF8P60827 252 aa13.33□□□□□ -0.28
PACS1-214ENST00000533811 BTAF1O14981 1849 aa13.33□□□□□ -0.28
PACS1-214ENST00000533811 GPR162Q16538 588 aa13.32□□□□□ -0.28
PACS1-214ENST00000533811 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
PACS1-214ENST00000533811 SGIP1Q9BQI5 828 aa13.32□□□□□ -0.28
PACS1-214ENST00000533811 UTRNP46939 3433 aa13.32□□□□□ -0.28
PACS1-214ENST00000533811 NFAT5O94916 1531 aa13.31□□□□□ -0.28
PACS1-214ENST00000533811 NLRP2Q9NX02 1062 aa13.31□□□□□ -0.28
PACS1-214ENST00000533811 ZNF827Q17R98 1081 aa13.3□□□□□ -0.28
PACS1-214ENST00000533811 ZNF692Q9BU19 519 aaPredicted RBP13.3□□□□□ -0.28
PACS1-214ENST00000533811 PAPPAQ13219 1627 aa13.3□□□□□ -0.28
PACS1-214ENST00000533811 TTC21AQ8NDW8 1320 aa13.3□□□□□ -0.28
PACS1-214ENST00000533811 LTN1O94822 1766 aa13.3□□□□□ -0.28
PACS1-214ENST00000533811 ABCC6O95255 1503 aa13.29□□□□□ -0.28
PACS1-214ENST00000533811 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.29□□□□□ -0.28
PACS1-214ENST00000533811 KTN1Q86UP2 1357 aaKnown RBP13.29□□□□□ -0.28
PACS1-214ENST00000533811 GIGYF1O75420 1035 aaPredicted RBP13.27□□□□□ -0.29
PACS1-214ENST00000533811 IL2RBP14784 551 aa13.27□□□□□ -0.29
PACS1-214ENST00000533811 MON2Q7Z3U7 1717 aa13.27□□□□□ -0.29
PACS1-214ENST00000533811 ERBB3P21860 1342 aa13.26□□□□□ -0.29
PACS1-214ENST00000533811 POLD1P28340 1107 aa13.26□□□□□ -0.29
PACS1-214ENST00000533811 MAP3K5Q99683 1374 aa13.26□□□□□ -0.29
PACS1-214ENST00000533811 LRRC4BQ9NT99 713 aa13.26□□□□□ -0.29
PACS1-214ENST00000533811 TUBGCP6Q96RT7 1819 aa13.25□□□□□ -0.29
PACS1-214ENST00000533811 ROCK2O75116 1388 aaKnown RBP13.25□□□□□ -0.29
PACS1-214ENST00000533811 ANKRD24Q8TF21 1146 aa13.25□□□□□ -0.29
PACS1-214ENST00000533811 NME9Q86XW9 330 aa13.24□□□□□ -0.29
PACS1-214ENST00000533811 DDX54Q8TDD1 881 aaKnown RBP13.24□□□□□ -0.29
PACS1-214ENST00000533811 L3MBTL2Q969R5 705 aa13.24□□□□□ -0.29
PACS1-214ENST00000533811 QSER1Q2KHR3 1735 aa13.24□□□□□ -0.29
PACS1-214ENST00000533811 KCNQ4P56696 695 aa13.23□□□□□ -0.29
PACS1-214ENST00000533811 SYTL4Q96C24 671 aaPredicted RBP13.23□□□□□ -0.29
PACS1-214ENST00000533811 TFCP2L1Q9NZI6 479 aa13.23□□□□□ -0.29
PACS1-214ENST00000533811 NLGN2Q8NFZ4 835 aa13.22□□□□□ -0.29
PACS1-214ENST00000533811 TMC1Q8TDI8 760 aa13.22□□□□□ -0.29
PACS1-214ENST00000533811 SLC16A10Q8TF71 515 aa13.22□□□□□ -0.29
PACS1-214ENST00000533811 AKT1S1Q96B36 256 aa13.22□□□□□ -0.29
PACS1-214ENST00000533811 LTV1Q96GA3 475 aaPredicted RBP13.22□□□□□ -0.29
PACS1-214ENST00000533811 USP54Q70EL1 1684 aa13.21□□□□□ -0.29
PACS1-214ENST00000533811 PNPLA7Q6ZV29 1317 aa13.21□□□□□ -0.29
PACS1-214ENST00000533811 MSH5O43196 834 aa13.21□□□□□ -0.29
PACS1-214ENST00000533811 DOT1LQ8TEK3 1739 aa13.21□□□□□ -0.3
PACS1-214ENST00000533811 SHANK3Q9BYB0 1731 aa13.21□□□□□ -0.3
PACS1-214ENST00000533811 USP31Q70CQ4 1352 aa13.2□□□□□ -0.3
PACS1-214ENST00000533811 SLC27A3Q5K4L6 730 aa13.2□□□□□ -0.3
PACS1-214ENST00000533811 COL24A1Q17RW2 1714 aa13.19□□□□□ -0.3
PACS1-214ENST00000533811 HDGFL2Q7Z4V5 671 aaPredicted RBP13.19□□□□□ -0.3
PACS1-214ENST00000533811 FAM208AQ9UK61 1670 aaKnown RBP13.18□□□□□ -0.3
PACS1-214ENST00000533811 PRIM1P49642 420 aaKnown RBP13.18□□□□□ -0.3
PACS1-214ENST00000533811 NEUROD1Q13562 356 aa13.18□□□□□ -0.3
PACS1-214ENST00000533811 IFFO2Q5TF58 517 aa13.18□□□□□ -0.3
PACS1-214ENST00000533811 SIN3AQ96ST3 1273 aa13.18□□□□□ -0.3
PACS1-214ENST00000533811 SBNO2Q9Y2G9 1366 aa13.18□□□□□ -0.3
PACS1-214ENST00000533811 LY75O60449 1722 aa13.17□□□□□ -0.3
PACS1-214ENST00000533811 RGPD2P0DJD1 1756 aa13.17□□□□□ -0.3
PACS1-214ENST00000533811 CD163L1Q9NR16 1453 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms