RNA–Protein interactions for RNA: ENST00000533756.5

PACS1-213, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-213ENST00000533756 JMYQ8N9B5 988 aa13.7□□□□□ -0.22
PACS1-213ENST00000533756 NLGN2Q8NFZ4 835 aa13.69□□□□□ -0.22
PACS1-213ENST00000533756 KIF3CO14782 793 aa13.68□□□□□ -0.22
PACS1-213ENST00000533756 ZNF526Q8TF50 670 aaPredicted RBP13.68□□□□□ -0.22
PACS1-213ENST00000533756 NGDNQ8NEJ9 315 aaKnown RBP13.67□□□□□ -0.22
PACS1-213ENST00000533756 KLRG1Q96E93 195 aa13.66□□□□□ -0.22
PACS1-213ENST00000533756 CPDO75976 1380 aa13.66□□□□□ -0.22
PACS1-213ENST00000533756 PHRF1Q9P1Y6 1649 aaKnown RBP13.65□□□□□ -0.22
PACS1-213ENST00000533756 MARCH10Q8NA82 808 aaPredicted RBP13.65□□□□□ -0.22
PACS1-213ENST00000533756 EIF3AQ14152 1382 aaKnown RBP13.65□□□□□ -0.22
PACS1-213ENST00000533756 ANKRD30BQ9BXX2 1392 aa13.65□□□□□ -0.22
PACS1-213ENST00000533756 CRB1P82279 1406 aa13.64□□□□□ -0.23
PACS1-213ENST00000533756 TOMM70O94826 608 aa13.64□□□□□ -0.23
PACS1-213ENST00000533756 PRAM1Q96QH2 718 aa13.64□□□□□ -0.23
PACS1-213ENST00000533756 LMO7Q8WWI1 1683 aa13.63□□□□□ -0.23
PACS1-213ENST00000533756 SAFB2Q14151 953 aaKnown RBP eCLIP13.63□□□□□ -0.232e-6■□□□□ 11.3
PACS1-213ENST00000533756 CDCA7Q9BWT1 371 aaPredicted RBP13.63□□□□□ -0.23
PACS1-213ENST00000533756 COL24A1Q17RW2 1714 aa13.63□□□□□ -0.23
PACS1-213ENST00000533756 LRRC37A3O60309 1634 aa13.62□□□□□ -0.23
PACS1-213ENST00000533756 C1QBPQ07021 282 aaKnown RBP13.62□□□□□ -0.23
PACS1-213ENST00000533756 WWC3Q9ULE0 1092 aa13.62□□□□□ -0.23
PACS1-213ENST00000533756 PIK3C2GO75747 1445 aa13.62□□□□□ -0.23
PACS1-213ENST00000533756 PRR36Q9H6K5 1346 aa13.62□□□□□ -0.23
PACS1-213ENST00000533756 COL5A2P05997 1499 aaPredicted RBP13.61□□□□□ -0.23
PACS1-213ENST00000533756 C14orf93Q9H972 538 aaKnown RBP13.61□□□□□ -0.23
PACS1-213ENST00000533756 POGKQ9P215 609 aa13.61□□□□□ -0.23
PACS1-213ENST00000533756 PAPPAQ13219 1627 aa13.61□□□□□ -0.23
PACS1-213ENST00000533756 ZNF827Q17R98 1081 aa13.6□□□□□ -0.23
PACS1-213ENST00000533756 TOPAZ1Q8N9V7 1692 aa13.59□□□□□ -0.23
PACS1-213ENST00000533756 NUTM2GQ5VZR2 741 aa13.59□□□□□ -0.23
PACS1-213ENST00000533756 AKT1S1Q96B36 256 aa13.58□□□□□ -0.24
PACS1-213ENST00000533756 TULP4Q9NRJ4 1543 aa13.58□□□□□ -0.24
PACS1-213ENST00000533756 RGL3Q3MIN7 710 aa13.57□□□□□ -0.24
PACS1-213ENST00000533756 WDR90Q96KV7 1748 aa13.56□□□□□ -0.24
PACS1-213ENST00000533756 WASLO00401 505 aaPredicted RBP13.56□□□□□ -0.24
PACS1-213ENST00000533756 TOM1L2Q6ZVM7 507 aa13.56□□□□□ -0.24
PACS1-213ENST00000533756 EXOC5O00471 708 aa13.55□□□□□ -0.24
PACS1-213ENST00000533756 GCP02774 474 aa13.55□□□□□ -0.24
PACS1-213ENST00000533756 HIRIP3Q9BW71 556 aaPredicted RBP13.55□□□□□ -0.24
PACS1-213ENST00000533756 CD2APQ9Y5K6 639 aa13.55□□□□□ -0.24
PACS1-213ENST00000533756 USP19O94966 1318 aa13.55□□□□□ -0.24
PACS1-213ENST00000533756 PNPLA7Q6ZV29 1317 aa13.55□□□□□ -0.24
PACS1-213ENST00000533756 BRD4O60885 1362 aaPredicted RBP13.55□□□□□ -0.24
PACS1-213ENST00000533756 QSER1Q2KHR3 1735 aa13.54□□□□□ -0.24
PACS1-213ENST00000533756 AKAP12Q02952 1782 aa13.54□□□□□ -0.24
PACS1-213ENST00000533756 LRRC4BQ9NT99 713 aa13.54□□□□□ -0.24
PACS1-213ENST00000533756 NLRP13Q86W25 1043 aa13.53□□□□□ -0.24
PACS1-213ENST00000533756 ABTB2Q8N961 1025 aa13.53□□□□□ -0.24
PACS1-213ENST00000533756 RBM46Q8TBY0 533 aaKnown RBP13.53□□□□□ -0.24
PACS1-213ENST00000533756 SPATA31E1Q6ZUB1 1445 aa13.53□□□□□ -0.24
PACS1-213ENST00000533756 ITGAEP38570 1179 aa13.52□□□□□ -0.25
PACS1-213ENST00000533756 SLC27A3Q5K4L6 730 aa13.52□□□□□ -0.25
PACS1-213ENST00000533756 CFAP70Q5T0N1 1121 aa13.52□□□□□ -0.25
PACS1-213ENST00000533756 TFCP2L1Q9NZI6 479 aa13.52□□□□□ -0.25
PACS1-213ENST00000533756 ARHGEF28Q8N1W1 1705 aaKnown RBP13.52□□□□□ -0.25
PACS1-213ENST00000533756 WDR17Q8IZU2 1322 aa13.51□□□□□ -0.25
PACS1-213ENST00000533756 MINK1Q8N4C8 1332 aaPredicted RBP13.51□□□□□ -0.25
PACS1-213ENST00000533756 HTRA3P83110 453 aa13.51□□□□□ -0.25
PACS1-213ENST00000533756 NHSQ6T4R5 1651 aa13.5□□□□□ -0.25
PACS1-213ENST00000533756 PCNTO95613 3336 aa13.5□□□□□ -0.25
PACS1-213ENST00000533756 FSTL1Q12841 308 aa13.5□□□□□ -0.25
PACS1-213ENST00000533756 NUDT16Q96DE0 195 aaKnown RBP13.5□□□□□ -0.25
PACS1-213ENST00000533756 SLC4A1APQ9BWU0 796 aaKnown RBP13.5□□□□□ -0.25
PACS1-213ENST00000533756 POLR3AO14802 1390 aaPredicted RBP13.49□□□□□ -0.25
PACS1-213ENST00000533756 HSPA1AP0DMV8 641 aaKnown RBP13.49□□□□□ -0.25
PACS1-213ENST00000533756 HSPA1BP0DMV9 641 aaKnown RBP13.49□□□□□ -0.25
PACS1-213ENST00000533756 USP6P35125 1406 aa13.48□□□□□ -0.25
PACS1-213ENST00000533756 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
PACS1-213ENST00000533756 CARD10Q9BWT7 1032 aa13.48□□□□□ -0.25
PACS1-213ENST00000533756 WNK3Q9BYP7 1800 aa13.48□□□□□ -0.25
PACS1-213ENST00000533756 ITSN1Q15811 1721 aa13.47□□□□□ -0.25
PACS1-213ENST00000533756 ACEP12821 1306 aa13.46□□□□□ -0.25
PACS1-213ENST00000533756 PLEKHG3A1L390 1219 aa13.45□□□□□ -0.26
PACS1-213ENST00000533756 ZBTB7CA1YPR0 619 aa13.45□□□□□ -0.26
PACS1-213ENST00000533756 C16orf71Q8IYS4 520 aaPredicted RBP13.45□□□□□ -0.26
PACS1-213ENST00000533756 NMRK2Q9NPI5 230 aa13.45□□□□□ -0.26
PACS1-213ENST00000533756 TRAK1Q9UPV9 953 aa13.45□□□□□ -0.26
PACS1-213ENST00000533756 LOC105371045A0A1W2PR82 267 aa13.44□□□□□ -0.26
PACS1-213ENST00000533756 AXIN2Q9Y2T1 843 aa13.44□□□□□ -0.26
PACS1-213ENST00000533756 TNS2Q63HR2 1409 aa13.44□□□□□ -0.26
PACS1-213ENST00000533756 CCDC61Q9Y6R9 512 aa13.43□□□□□ -0.26
PACS1-213ENST00000533756 BTAF1O14981 1849 aa13.43□□□□□ -0.26
PACS1-213ENST00000533756 CCDC7Q96M83 1385 aa13.43□□□□□ -0.26
PACS1-213ENST00000533756 COL23A1Q86Y22 540 aaPredicted RBP13.42□□□□□ -0.26
PACS1-213ENST00000533756 IGSF1Q8N6C5 1336 aa13.41□□□□□ -0.26
PACS1-213ENST00000533756 SLC4A2P04920 1241 aa13.41□□□□□ -0.26
PACS1-213ENST00000533756 U3KPZ7 1027 aaPredicted RBP13.41□□□□□ -0.26
PACS1-213ENST00000533756 TRPM1Q7Z4N2 1603 aa13.41□□□□□ -0.26
PACS1-213ENST00000533756 CSB-PGBD3P0DP91 1061 aa13.4□□□□□ -0.26
PACS1-213ENST00000533756 FAM161AQ3B820 660 aa13.4□□□□□ -0.26
PACS1-213ENST00000533756 COL18A1P39060 1754 aa13.4□□□□□ -0.26
PACS1-213ENST00000533756 ABCC6O95255 1503 aa13.39□□□□□ -0.27
PACS1-213ENST00000533756 CICQ96RK0 1608 aaPredicted RBP13.39□□□□□ -0.27
PACS1-213ENST00000533756 TUBGCP6Q96RT7 1819 aa13.39□□□□□ -0.27
PACS1-213ENST00000533756 ADGRB1O14514 1584 aa13.39□□□□□ -0.27
PACS1-213ENST00000533756 NLRP6P59044 892 aa13.38□□□□□ -0.27
PACS1-213ENST00000533756 MSL1Q68DK7 614 aa13.38□□□□□ -0.27
PACS1-213ENST00000533756 CDK19Q9BWU1 502 aa13.38□□□□□ -0.27
PACS1-213ENST00000533756 PPIP5K1Q6PFW1 1433 aa13.38□□□□□ -0.27
PACS1-213ENST00000533756 SLIT3O75094 1523 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms