RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 CAMTA1Q9Y6Y1 1673 aa18.17■□□□□ 0.5
TRAPPC4-214ENST00000533632 CHRNA2Q15822 529 aa18.17■□□□□ 0.5
TRAPPC4-214ENST00000533632 PRDM11Q9NQV5 511 aa18.16■□□□□ 0.5
TRAPPC4-214ENST00000533632 MYBBP1AQ9BQG0 1328 aaKnown RBP18.16■□□□□ 0.5
TRAPPC4-214ENST00000533632 AATKQ6ZMQ8 1374 aa18.16■□□□□ 0.5
TRAPPC4-214ENST00000533632 ARHGEF25Q86VW2 580 aa18.15■□□□□ 0.5
TRAPPC4-214ENST00000533632 RRS1Q15050 365 aaKnown RBP18.14■□□□□ 0.5
TRAPPC4-214ENST00000533632 CCDC184Q52MB2 194 aa18.14■□□□□ 0.5
TRAPPC4-214ENST00000533632 KCNH5Q8NCM2 988 aa18.14■□□□□ 0.5
TRAPPC4-214ENST00000533632 USP21Q9UK80 565 aa18.14■□□□□ 0.5
TRAPPC4-214ENST00000533632 ATRNO75882 1429 aa18.14■□□□□ 0.5
TRAPPC4-214ENST00000533632 POLKQ9UBT6 870 aa18.14■□□□□ 0.49
TRAPPC4-214ENST00000533632 EMILIN1Q9Y6C2 1016 aa18.14■□□□□ 0.49
TRAPPC4-214ENST00000533632 SMG6Q86US8 1419 aaKnown RBP18.14■□□□□ 0.49
TRAPPC4-214ENST00000533632 BTG4Q9NY30 223 aa18.13■□□□□ 0.49
TRAPPC4-214ENST00000533632 MAP3K19Q56UN5 1328 aa18.12■□□□□ 0.49
TRAPPC4-214ENST00000533632 ZNF772Q68DY9 489 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC4-214ENST00000533632 ABCC6O95255 1503 aa18.12■□□□□ 0.49
TRAPPC4-214ENST00000533632 CENPBP07199 599 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC4-214ENST00000533632 UNC5CLQ8IV45 518 aa18.12■□□□□ 0.49
TRAPPC4-214ENST00000533632 AXIN2Q9Y2T1 843 aa18.12■□□□□ 0.49
TRAPPC4-214ENST00000533632 GLI3P10071 1580 aa18.11■□□□□ 0.49
TRAPPC4-214ENST00000533632 MTHFSP49914 203 aa18.11■□□□□ 0.49
TRAPPC4-214ENST00000533632 COL5A2P05997 1499 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC4-214ENST00000533632 QTRT2Q9H974 415 aaKnown RBP18.09■□□□□ 0.49
TRAPPC4-214ENST00000533632 COL3A1P02461 1466 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC4-214ENST00000533632 CDK12Q9NYV4 1490 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC4-214ENST00000533632 ZBTB7CA1YPR0 619 aa18.07■□□□□ 0.48
TRAPPC4-214ENST00000533632 PPM1GO15355 546 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC4-214ENST00000533632 ILDR2Q71H61 639 aa18.07■□□□□ 0.48
TRAPPC4-214ENST00000533632 TRPC5Q9UL62 973 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC4-214ENST00000533632 VPS72Q15906 364 aa18.07■□□□□ 0.48
TRAPPC4-214ENST00000533632 FLT4P35916 1363 aa18.04■□□□□ 0.48
TRAPPC4-214ENST00000533632 RGPD2P0DJD1 1756 aa18.04■□□□□ 0.48
TRAPPC4-214ENST00000533632 RTL1A6NKG5 1358 aa18.04■□□□□ 0.48
TRAPPC4-214ENST00000533632 INSRP06213 1382 aa18.04■□□□□ 0.48
TRAPPC4-214ENST00000533632 HOXC9P31274 260 aa18.04■□□□□ 0.48
TRAPPC4-214ENST00000533632 HSP90AB2PQ58FF8 381 aa18.04■□□□□ 0.48
TRAPPC4-214ENST00000533632 GJD4Q96KN9 370 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC4-214ENST00000533632 KIF24Q5T7B8 1368 aa18.03■□□□□ 0.48
TRAPPC4-214ENST00000533632 RBM6P78332 1123 aaKnown RBP18.03■□□□□ 0.48
TRAPPC4-214ENST00000533632 LARP1Q6PKG0 1096 aaKnown RBP18.03■□□□□ 0.48
TRAPPC4-214ENST00000533632 IP6K1Q92551 441 aa18.03■□□□□ 0.48
TRAPPC4-214ENST00000533632 MRS2Q9HD23 443 aa18.03■□□□□ 0.48
TRAPPC4-214ENST00000533632 STRN4Q9NRL3 753 aa18.03■□□□□ 0.48
TRAPPC4-214ENST00000533632 SPATA31A5Q5VU36 1347 aa18.03■□□□□ 0.48
TRAPPC4-214ENST00000533632 SPATA31A7Q8IWB4 1347 aa18.03■□□□□ 0.48
TRAPPC4-214ENST00000533632 AMPHP49418 695 aa18.02■□□□□ 0.48
TRAPPC4-214ENST00000533632 YTHDC1Q96MU7 727 aaKnown RBP18.02■□□□□ 0.48
TRAPPC4-214ENST00000533632 BLMP54132 1417 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC4-214ENST00000533632 WNK3Q9BYP7 1800 aa18.02■□□□□ 0.47
TRAPPC4-214ENST00000533632 RXRBP28702 533 aa18.02■□□□□ 0.47
TRAPPC4-214ENST00000533632 RGS12O14924 1447 aa18.01■□□□□ 0.47
TRAPPC4-214ENST00000533632 ERBB3P21860 1342 aa18.01■□□□□ 0.47
TRAPPC4-214ENST00000533632 SPATA31A1Q5TZJ5 1347 aa18.01■□□□□ 0.47
TRAPPC4-214ENST00000533632 BRWD3Q6RI45 1802 aa18.01■□□□□ 0.47
TRAPPC4-214ENST00000533632 FAM208AQ9UK61 1670 aaKnown RBP18■□□□□ 0.47
TRAPPC4-214ENST00000533632 THSD7AQ9UPZ6 1657 aa18■□□□□ 0.47
TRAPPC4-214ENST00000533632 WDR17Q8IZU2 1322 aa18■□□□□ 0.47
TRAPPC4-214ENST00000533632 RGPD1P0DJD0 1748 aa18■□□□□ 0.47
TRAPPC4-214ENST00000533632 CRB1P82279 1406 aa18■□□□□ 0.47
TRAPPC4-214ENST00000533632 EVA1CP58658 441 aa17.98■□□□□ 0.47
TRAPPC4-214ENST00000533632 EIF4A2Q14240 407 aaKnown RBP17.98■□□□□ 0.47
TRAPPC4-214ENST00000533632 CFAP53Q96M91 514 aa17.98■□□□□ 0.47
TRAPPC4-214ENST00000533632 ONECUT3O60422 494 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC4-214ENST00000533632 IL13P35225 146 aa17.97■□□□□ 0.47
TRAPPC4-214ENST00000533632 PNISRQ8TF01 805 aaKnown RBP17.96■□□□□ 0.47
TRAPPC4-214ENST00000533632 ANKRD24Q8TF21 1146 aa17.96■□□□□ 0.47
TRAPPC4-214ENST00000533632 CCDC9Q9Y3X0 531 aaKnown RBP17.96■□□□□ 0.47
TRAPPC4-214ENST00000533632 DIAPH1O60610 1272 aaKnown RBP17.96■□□□□ 0.47
TRAPPC4-214ENST00000533632 LTV1Q96GA3 475 aaPredicted RBP17.96■□□□□ 0.47
TRAPPC4-214ENST00000533632 EP400Q96L91 3159 aa17.95■□□□□ 0.46
TRAPPC4-214ENST00000533632 PARP4Q9UKK3 1724 aaKnown RBP17.95■□□□□ 0.46
TRAPPC4-214ENST00000533632 FAM98CQ17RN3 349 aaKnown RBP17.94■□□□□ 0.46
TRAPPC4-214ENST00000533632 USP35Q9P2H5 1018 aa17.94■□□□□ 0.46
TRAPPC4-214ENST00000533632 TOM1L2Q6ZVM7 507 aa17.94■□□□□ 0.46
TRAPPC4-214ENST00000533632 CARD10Q9BWT7 1032 aa17.94■□□□□ 0.46
TRAPPC4-214ENST00000533632 DISP2A7MBM2 1401 aa17.93■□□□□ 0.46
TRAPPC4-214ENST00000533632 CSB-PGBD3P0DP91 1061 aa17.92■□□□□ 0.46
TRAPPC4-214ENST00000533632 BARGINQ6ZT62 677 aa17.92■□□□□ 0.46
TRAPPC4-214ENST00000533632 TCP11L2Q8N4U5 519 aa17.92■□□□□ 0.46
TRAPPC4-214ENST00000533632 LRRC37A3O60309 1634 aa17.92■□□□□ 0.46
TRAPPC4-214ENST00000533632 U2SURPO15042 1029 aaKnown RBP17.91■□□□□ 0.46
TRAPPC4-214ENST00000533632 SEPT12Q8IYM1 358 aa17.91■□□□□ 0.46
TRAPPC4-214ENST00000533632 EYA1Q99502 592 aa17.91■□□□□ 0.46
TRAPPC4-214ENST00000533632 ADAMTS8Q9UP79 889 aa17.91■□□□□ 0.46
TRAPPC4-214ENST00000533632 THRAP3Q9Y2W1 955 aaKnown RBP17.91■□□□□ 0.46
TRAPPC4-214ENST00000533632 NCAPD2Q15021 1401 aa17.91■□□□□ 0.46
TRAPPC4-214ENST00000533632 IGSF1Q8N6C5 1336 aa17.9■□□□□ 0.46
TRAPPC4-214ENST00000533632 NBPF6Q5VWK0 638 aa17.9■□□□□ 0.46
TRAPPC4-214ENST00000533632 FAM9BQ8IZU0 186 aa17.9■□□□□ 0.46
TRAPPC4-214ENST00000533632 NBPF4Q96M43 638 aa17.9■□□□□ 0.46
TRAPPC4-214ENST00000533632 AEBP1Q8IUX7 1158 aa17.89■□□□□ 0.45
TRAPPC4-214ENST00000533632 NLRP2Q9NX02 1062 aa17.89■□□□□ 0.45
TRAPPC4-214ENST00000533632 U2AF1L5P0DN76 240 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC4-214ENST00000533632 U2AF1Q01081 240 aaKnown RBP eCLIP17.89■□□□□ 0.45
TRAPPC4-214ENST00000533632 USHBP1Q8N6Y0 703 aa17.89■□□□□ 0.45
TRAPPC4-214ENST00000533632 WDR43Q15061 677 aaKnown RBP eCLIP17.88■□□□□ 0.45
TRAPPC4-214ENST00000533632 NUDCQ9Y266 331 aa17.88■□□□□ 0.45
TRAPPC4-214ENST00000533632 HMOX1P09601 288 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms