RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 MAP3K19Q56UN5 1328 aa19.9■□□□□ 0.78
SF3B2-214ENST00000533595 NPC1L1Q9UHC9 1359 aa19.9■□□□□ 0.78
SF3B2-214ENST00000533595 ABCC6O95255 1503 aa19.9■□□□□ 0.78
SF3B2-214ENST00000533595 EVA1CP58658 441 aa19.89■□□□□ 0.77
SF3B2-214ENST00000533595 DDX10Q13206 875 aaKnown RBP19.89■□□□□ 0.77
SF3B2-214ENST00000533595 RRS1Q15050 365 aaKnown RBP19.89■□□□□ 0.77
SF3B2-214ENST00000533595 VPS72Q15906 364 aa19.89■□□□□ 0.77
SF3B2-214ENST00000533595 CC2D1BQ5T0F9 858 aaKnown RBP19.89■□□□□ 0.77
SF3B2-214ENST00000533595 STRN4Q9NRL3 753 aa19.89■□□□□ 0.77
SF3B2-214ENST00000533595 AXIN2Q9Y2T1 843 aa19.89■□□□□ 0.77
SF3B2-214ENST00000533595 TNNT2P45379 298 aaPredicted RBP19.88■□□□□ 0.77
SF3B2-214ENST00000533595 AMPHP49418 695 aa19.88■□□□□ 0.77
SF3B2-214ENST00000533595 IP6K1Q92551 441 aa19.87■□□□□ 0.77
SF3B2-214ENST00000533595 CCDC9Q9Y3X0 531 aaKnown RBP19.87■□□□□ 0.77
SF3B2-214ENST00000533595 COL5A2P05997 1499 aaPredicted RBP19.86■□□□□ 0.77
SF3B2-214ENST00000533595 RXRBP28702 533 aa19.86■□□□□ 0.77
SF3B2-214ENST00000533595 RBM6P78332 1123 aaKnown RBP19.86■□□□□ 0.77
SF3B2-214ENST00000533595 GJD4Q96KN9 370 aaPredicted RBP19.86■□□□□ 0.77
SF3B2-214ENST00000533595 RTL1A6NKG5 1358 aa19.85■□□□□ 0.77
SF3B2-214ENST00000533595 CNGB1Q14028 1251 aaPredicted RBP19.85■□□□□ 0.77
SF3B2-214ENST00000533595 RGPD5Q99666 1765 aa19.85■□□□□ 0.77
SF3B2-214ENST00000533595 BLMP54132 1417 aaPredicted RBP19.85■□□□□ 0.77
SF3B2-214ENST00000533595 KIF24Q5T7B8 1368 aa19.84■□□□□ 0.77
SF3B2-214ENST00000533595 HOXC9P31274 260 aa19.84■□□□□ 0.77
SF3B2-214ENST00000533595 LARP1Q6PKG0 1096 aaKnown RBP19.84■□□□□ 0.77
SF3B2-214ENST00000533595 EMILIN1Q9Y6C2 1016 aa19.84■□□□□ 0.77
SF3B2-214ENST00000533595 POLKQ9UBT6 870 aa19.83■□□□□ 0.77
SF3B2-214ENST00000533595 MAP2P11137 1827 aaKnown RBP19.83■□□□□ 0.76
SF3B2-214ENST00000533595 FLT4P35916 1363 aa19.83■□□□□ 0.76
SF3B2-214ENST00000533595 SPATA31A5Q5VU36 1347 aa19.82■□□□□ 0.76
SF3B2-214ENST00000533595 SPATA31A7Q8IWB4 1347 aa19.82■□□□□ 0.76
SF3B2-214ENST00000533595 WDR17Q8IZU2 1322 aa19.82■□□□□ 0.76
SF3B2-214ENST00000533595 PPM1GO15355 546 aaPredicted RBP19.82■□□□□ 0.76
SF3B2-214ENST00000533595 CSB-PGBD3P0DP91 1061 aa19.82■□□□□ 0.76
SF3B2-214ENST00000533595 ANKRD24Q8TF21 1146 aa19.81■□□□□ 0.76
SF3B2-214ENST00000533595 ERBB3P21860 1342 aa19.8■□□□□ 0.76
SF3B2-214ENST00000533595 SPATA31A1Q5TZJ5 1347 aa19.8■□□□□ 0.76
SF3B2-214ENST00000533595 PEAK1Q9H792 1746 aa19.8■□□□□ 0.76
SF3B2-214ENST00000533595 GLI3P10071 1580 aa19.8■□□□□ 0.76
SF3B2-214ENST00000533595 CRB1P82279 1406 aa19.8■□□□□ 0.76
SF3B2-214ENST00000533595 TOM1L2Q6ZVM7 507 aa19.8■□□□□ 0.76
SF3B2-214ENST00000533595 HSP90AB2PQ58FF8 381 aa19.79■□□□□ 0.76
SF3B2-214ENST00000533595 LTV1Q96GA3 475 aaPredicted RBP19.79■□□□□ 0.76
SF3B2-214ENST00000533595 INSRP06213 1382 aa19.79■□□□□ 0.76
SF3B2-214ENST00000533595 USP35Q9P2H5 1018 aa19.78■□□□□ 0.76
SF3B2-214ENST00000533595 CDK12Q9NYV4 1490 aaPredicted RBP19.78■□□□□ 0.76
SF3B2-214ENST00000533595 SMG6Q86US8 1419 aaKnown RBP19.77■□□□□ 0.76
SF3B2-214ENST00000533595 TCP11L2Q8N4U5 519 aa19.77■□□□□ 0.76
SF3B2-214ENST00000533595 FAM98CQ17RN3 349 aaKnown RBP19.76■□□□□ 0.75
SF3B2-214ENST00000533595 CARD10Q9BWT7 1032 aa19.76■□□□□ 0.75
SF3B2-214ENST00000533595 NLRP2Q9NX02 1062 aa19.76■□□□□ 0.75
SF3B2-214ENST00000533595 ONECUT3O60422 494 aaPredicted RBP19.75■□□□□ 0.75
SF3B2-214ENST00000533595 THRAP3Q9Y2W1 955 aaKnown RBP19.75■□□□□ 0.75
SF3B2-214ENST00000533595 RGS12O14924 1447 aa19.75■□□□□ 0.75
SF3B2-214ENST00000533595 BARGINQ6ZT62 677 aa19.74■□□□□ 0.75
SF3B2-214ENST00000533595 FAM208AQ9UK61 1670 aaKnown RBP19.73■□□□□ 0.75
SF3B2-214ENST00000533595 MTHFSP49914 203 aa19.73■□□□□ 0.75
SF3B2-214ENST00000533595 A0A0G2JS52 829 aa19.72■□□□□ 0.75
SF3B2-214ENST00000533595 MYT1Q01538 1121 aa19.72■□□□□ 0.75
SF3B2-214ENST00000533595 SEPT12Q8IYM1 358 aa19.72■□□□□ 0.75
SF3B2-214ENST00000533595 PARD3Q8TEW0 1356 aa19.71■□□□□ 0.75
SF3B2-214ENST00000533595 PPP2R1AP30153 589 aa19.7■□□□□ 0.74
SF3B2-214ENST00000533595 EIF4A2Q14240 407 aaKnown RBP19.69■□□□□ 0.74
SF3B2-214ENST00000533595 RALBP1Q15311 655 aa19.69■□□□□ 0.74
SF3B2-214ENST00000533595 NBPF6Q5VWK0 638 aa19.69■□□□□ 0.74
SF3B2-214ENST00000533595 NBPF4Q96M43 638 aa19.69■□□□□ 0.74
SF3B2-214ENST00000533595 THSD7AQ9UPZ6 1657 aa19.68■□□□□ 0.74
SF3B2-214ENST00000533595 RGPD2P0DJD1 1756 aa19.68■□□□□ 0.74
SF3B2-214ENST00000533595 CDCA7Q9BWT1 371 aaPredicted RBP19.68■□□□□ 0.74
SF3B2-214ENST00000533595 USHBP1Q8N6Y0 703 aa19.66■□□□□ 0.74
SF3B2-214ENST00000533595 EYA1Q99502 592 aa19.66■□□□□ 0.74
SF3B2-214ENST00000533595 WNK3Q9BYP7 1800 aa19.65■□□□□ 0.74
SF3B2-214ENST00000533595 IL2RBP14784 551 aa19.65■□□□□ 0.74
SF3B2-214ENST00000533595 CFAP53Q96M91 514 aa19.65■□□□□ 0.74
SF3B2-214ENST00000533595 DISP2A7MBM2 1401 aa19.65■□□□□ 0.74
SF3B2-214ENST00000533595 BRWD3Q6RI45 1802 aa19.64■□□□□ 0.73
SF3B2-214ENST00000533595 PARP4Q9UKK3 1724 aaKnown RBP19.63■□□□□ 0.73
SF3B2-214ENST00000533595 IL13P35225 146 aa19.63■□□□□ 0.73
SF3B2-214ENST00000533595 KRT27Q7Z3Y8 459 aa19.63■□□□□ 0.73
SF3B2-214ENST00000533595 NCAPD2Q15021 1401 aa19.62■□□□□ 0.73
SF3B2-214ENST00000533595 DIAPH1O60610 1272 aaKnown RBP19.62■□□□□ 0.73
SF3B2-214ENST00000533595 DDB1Q16531 1140 aa19.62■□□□□ 0.73
SF3B2-214ENST00000533595 PRKRIP1Q9H875 184 aaPredicted RBP19.62■□□□□ 0.73
SF3B2-214ENST00000533595 IGSF1Q8N6C5 1336 aa19.61■□□□□ 0.73
SF3B2-214ENST00000533595 MYBBP1AQ9BQG0 1328 aaKnown RBP19.61■□□□□ 0.73
SF3B2-214ENST00000533595 PDE3BQ13370 1112 aa19.61■□□□□ 0.73
SF3B2-214ENST00000533595 RAPGEF4Q8WZA2 1011 aa19.61■□□□□ 0.73
SF3B2-214ENST00000533595 COL3A1P02461 1466 aaPredicted RBP19.6■□□□□ 0.73
SF3B2-214ENST00000533595 EXOC5O00471 708 aa19.6■□□□□ 0.73
SF3B2-214ENST00000533595 EP400Q96L91 3159 aa19.6■□□□□ 0.73
SF3B2-214ENST00000533595 LRRC37A3O60309 1634 aa19.59■□□□□ 0.73
SF3B2-214ENST00000533595 MEGF6O75095 1541 aa19.59■□□□□ 0.73
SF3B2-214ENST00000533595 TATP17735 454 aaPredicted RBP19.58■□□□□ 0.72
SF3B2-214ENST00000533595 TNS2Q63HR2 1409 aa19.58■□□□□ 0.72
SF3B2-214ENST00000533595 RGPD1P0DJD0 1748 aa19.57■□□□□ 0.72
SF3B2-214ENST00000533595 OVOS2A0A0G2JMS6 1433 aa19.57■□□□□ 0.72
SF3B2-214ENST00000533595 ANP32CO43423 234 aa19.56■□□□□ 0.72
SF3B2-214ENST00000533595 NUDCQ9Y266 331 aa19.56■□□□□ 0.72
SF3B2-214ENST00000533595 U2SURPO15042 1029 aaKnown RBP19.55■□□□□ 0.72
SF3B2-214ENST00000533595 FAM182BQ5T319 152 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms