RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 ARHGEF25Q86VW2 580 aa23.7■■□□□ 1.38
CTSB-229ENST00000533572 USP54Q70EL1 1684 aa23.69■■□□□ 1.38
CTSB-229ENST00000533572 NFAT5O94916 1531 aa23.69■■□□□ 1.38
CTSB-229ENST00000533572 BRWD3Q6RI45 1802 aa23.68■■□□□ 1.38
CTSB-229ENST00000533572 COG3Q96JB2 828 aa23.68■■□□□ 1.38
CTSB-229ENST00000533572 CSB-PGBD3P0DP91 1061 aa23.66■■□□□ 1.38
CTSB-229ENST00000533572 TCP11L2Q8N4U5 519 aa23.66■■□□□ 1.38
CTSB-229ENST00000533572 SRCAPQ6ZRS2 3230 aa23.66■■□□□ 1.38
CTSB-229ENST00000533572 OVOS2A0A0J9YW53 1432 aa23.66■■□□□ 1.38
CTSB-229ENST00000533572 OVOS2Q6IE36 1432 aa23.66■■□□□ 1.38
CTSB-229ENST00000533572 TOM1L2Q6ZVM7 507 aa23.65■■□□□ 1.38
CTSB-229ENST00000533572 CRB1P82279 1406 aa23.65■■□□□ 1.38
CTSB-229ENST00000533572 THRAP3Q9Y2W1 955 aaKnown RBP23.64■■□□□ 1.37
CTSB-229ENST00000533572 ABCC6O95255 1503 aa23.64■■□□□ 1.37
CTSB-229ENST00000533572 COL18A1P39060 1754 aa23.63■■□□□ 1.37
CTSB-229ENST00000533572 BARGINQ6ZT62 677 aa23.63■■□□□ 1.37
CTSB-229ENST00000533572 CCDC125Q86Z20 511 aa23.63■■□□□ 1.37
CTSB-229ENST00000533572 THSD7AQ9UPZ6 1657 aa23.63■■□□□ 1.37
CTSB-229ENST00000533572 WDR17Q8IZU2 1322 aa23.62■■□□□ 1.37
CTSB-229ENST00000533572 AXIN2Q9Y2T1 843 aa23.62■■□□□ 1.37
CTSB-229ENST00000533572 MYOM1P52179 1685 aa23.62■■□□□ 1.37
CTSB-229ENST00000533572 SF3B2Q13435 895 aaKnown RBP23.61■■□□□ 1.37
CTSB-229ENST00000533572 NSD3Q9BZ95 1437 aa23.59■■□□□ 1.37
CTSB-229ENST00000533572 LTN1O94822 1766 aa23.58■■□□□ 1.37
CTSB-229ENST00000533572 PDE3BQ13370 1112 aa23.58■■□□□ 1.37
CTSB-229ENST00000533572 GGNBP2Q9H3C7 697 aa23.58■■□□□ 1.37
CTSB-229ENST00000533572 BLMP54132 1417 aaPredicted RBP23.58■■□□□ 1.36
CTSB-229ENST00000533572 FYB1O15117 783 aa23.57■■□□□ 1.36
CTSB-229ENST00000533572 EP400Q96L91 3159 aa23.57■■□□□ 1.36
CTSB-229ENST00000533572 RGPD5Q99666 1765 aa23.57■■□□□ 1.36
CTSB-229ENST00000533572 PANK3Q9H999 370 aa23.56■■□□□ 1.36
CTSB-229ENST00000533572 KIF20BQ96Q89 1820 aa23.55■■□□□ 1.36
CTSB-229ENST00000533572 CARD10Q9BWT7 1032 aa23.55■■□□□ 1.36
CTSB-229ENST00000533572 AMPHP49418 695 aa23.54■■□□□ 1.36
CTSB-229ENST00000533572 FAM182BQ5T319 152 aa23.53■■□□□ 1.36
CTSB-229ENST00000533572 CDCA7Q9BWT1 371 aaPredicted RBP23.53■■□□□ 1.36
CTSB-229ENST00000533572 CARD14Q9BXL6 1004 aa23.53■■□□□ 1.36
CTSB-229ENST00000533572 ERBB3P21860 1342 aa23.53■■□□□ 1.36
CTSB-229ENST00000533572 CGNL1Q0VF96 1302 aa23.53■■□□□ 1.36
CTSB-229ENST00000533572 ANKRD24Q8TF21 1146 aa23.52■■□□□ 1.36
CTSB-229ENST00000533572 IP6K1Q92551 441 aa23.52■■□□□ 1.36
CTSB-229ENST00000533572 NLRP2Q9NX02 1062 aa23.52■■□□□ 1.36
CTSB-229ENST00000533572 FAM196AQ6ZSG2 479 aa23.51■■□□□ 1.35
CTSB-229ENST00000533572 KNSTRNQ9Y448 316 aa23.51■■□□□ 1.35
CTSB-229ENST00000533572 MAP3K19Q56UN5 1328 aa23.51■■□□□ 1.35
CTSB-229ENST00000533572 PARP4Q9UKK3 1724 aaKnown RBP23.5■■□□□ 1.35
CTSB-229ENST00000533572 DDB1Q16531 1140 aa23.5■■□□□ 1.35
CTSB-229ENST00000533572 DDX10Q13206 875 aaKnown RBP23.48■■□□□ 1.35
CTSB-229ENST00000533572 LTV1Q96GA3 475 aaPredicted RBP23.48■■□□□ 1.35
CTSB-229ENST00000533572 RTL1A6NKG5 1358 aa23.48■■□□□ 1.35
CTSB-229ENST00000533572 FBLN1P23142 703 aa23.47■■□□□ 1.35
CTSB-229ENST00000533572 HOXC9P31274 260 aa23.47■■□□□ 1.35
CTSB-229ENST00000533572 BAG6P46379 1132 aa23.47■■□□□ 1.35
CTSB-229ENST00000533572 RRS1Q15050 365 aaKnown RBP23.47■■□□□ 1.35
CTSB-229ENST00000533572 WNK3Q9BYP7 1800 aa23.47■■□□□ 1.35
CTSB-229ENST00000533572 NSD2O96028 1365 aa23.45■■□□□ 1.34
CTSB-229ENST00000533572 PER1O15534 1290 aaPredicted RBP23.45■■□□□ 1.34
CTSB-229ENST00000533572 RGPD1P0DJD0 1748 aa23.45■■□□□ 1.34
CTSB-229ENST00000533572 LRRC37A3O60309 1634 aa23.44■■□□□ 1.34
CTSB-229ENST00000533572 DEFB132Q7Z7B7 95 aa23.44■■□□□ 1.34
CTSB-229ENST00000533572 OVOS2A0A0G2JMS6 1433 aa23.43■■□□□ 1.34
CTSB-229ENST00000533572 SMG6Q86US8 1419 aaKnown RBP23.43■■□□□ 1.34
CTSB-229ENST00000533572 FAM208AQ9UK61 1670 aaKnown RBP23.43■■□□□ 1.34
CTSB-229ENST00000533572 DISP2A7MBM2 1401 aa23.42■■□□□ 1.34
CTSB-229ENST00000533572 NPC1L1Q9UHC9 1359 aa23.42■■□□□ 1.34
CTSB-229ENST00000533572 EXOC5O00471 708 aa23.42■■□□□ 1.34
CTSB-229ENST00000533572 TRIM37O94972 964 aa23.42■■□□□ 1.34
CTSB-229ENST00000533572 IL2RBP14784 551 aa23.41■■□□□ 1.34
CTSB-229ENST00000533572 FLT4P35916 1363 aa23.4■■□□□ 1.34
CTSB-229ENST00000533572 KIF24Q5T7B8 1368 aa23.4■■□□□ 1.34
CTSB-229ENST00000533572 PPM1GO15355 546 aaPredicted RBP23.38■■□□□ 1.33
CTSB-229ENST00000533572 TNS2Q63HR2 1409 aa23.38■■□□□ 1.33
CTSB-229ENST00000533572 AMER1Q5JTC6 1135 aaPredicted RBP23.37■■□□□ 1.33
CTSB-229ENST00000533572 ANKRD26Q9UPS8 1709 aa23.36■■□□□ 1.33
CTSB-229ENST00000533572 EMILIN1Q9Y6C2 1016 aa23.36■■□□□ 1.33
CTSB-229ENST00000533572 INSRP06213 1382 aa23.36■■□□□ 1.33
CTSB-229ENST00000533572 APBA3O96018 575 aa23.35■■□□□ 1.33
CTSB-229ENST00000533572 TNNT2P45379 298 aaPredicted RBP23.35■■□□□ 1.33
CTSB-229ENST00000533572 EN1Q05925 392 aaPredicted RBP23.35■■□□□ 1.33
CTSB-229ENST00000533572 HSP90AB2PQ58FF8 381 aa23.35■■□□□ 1.33
CTSB-229ENST00000533572 MARCH10Q8NA82 808 aaPredicted RBP23.35■■□□□ 1.33
CTSB-229ENST00000533572 TNS1Q9HBL0 1735 aaKnown RBP23.35■■□□□ 1.33
CTSB-229ENST00000533572 PEAK1Q9H792 1746 aa23.33■■□□□ 1.32
CTSB-229ENST00000533572 MORC1Q86VD1 984 aa23.32■■□□□ 1.32
CTSB-229ENST00000533572 MAP2P11137 1827 aaKnown RBP23.3■■□□□ 1.32
CTSB-229ENST00000533572 BCL9O00512 1426 aa23.29■■□□□ 1.32
CTSB-229ENST00000533572 CC2D1BQ5T0F9 858 aaKnown RBP23.29■■□□□ 1.32
CTSB-229ENST00000533572 NBPF6Q5VWK0 638 aa23.29■■□□□ 1.32
CTSB-229ENST00000533572 RAPGEF4Q8WZA2 1011 aa23.29■■□□□ 1.32
CTSB-229ENST00000533572 NBPF4Q96M43 638 aa23.29■■□□□ 1.32
CTSB-229ENST00000533572 POLKQ9UBT6 870 aa23.29■■□□□ 1.32
CTSB-229ENST00000533572 RGPD2P0DJD1 1756 aa23.29■■□□□ 1.32
CTSB-229ENST00000533572 PARD3Q8TEW0 1356 aa23.28■■□□□ 1.32
CTSB-229ENST00000533572 USHBP1Q8N6Y0 703 aa23.28■■□□□ 1.32
CTSB-229ENST00000533572 EZH2Q15910 746 aaKnown RBP23.27■■□□□ 1.32
CTSB-229ENST00000533572 BCL11BQ9C0K0 894 aaPredicted RBP23.27■■□□□ 1.32
CTSB-229ENST00000533572 RALBP1Q15311 655 aa23.26■■□□□ 1.31
CTSB-229ENST00000533572 DDX54Q8TDD1 881 aaKnown RBP23.26■■□□□ 1.31
CTSB-229ENST00000533572 SBF2Q86WG5 1849 aa23.25■■□□□ 1.31
CTSB-229ENST00000533572 TATP17735 454 aaPredicted RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms