RNA–Protein interactions for RNA: ENST00000533543.5

ZNF250-209, Transcript of zinc finger protein 250, humanhuman

TSL 4

Gene ZNF250, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-209ENST00000533543 PUS7Q96PZ0 661 aaKnown RBP13.08□□□□□ -0.32
ZNF250-209ENST00000533543 SLIT3O75094 1523 aa13.08□□□□□ -0.32
ZNF250-209ENST00000533543 EP400Q96L91 3159 aa13.08□□□□□ -0.32
ZNF250-209ENST00000533543 SPDYE2BA6NHP3 402 aa13.07□□□□□ -0.32
ZNF250-209ENST00000533543 SOX12O15370 315 aa13.07□□□□□ -0.32
ZNF250-209ENST00000533543 SPDYE6P0CI01 402 aa13.07□□□□□ -0.32
ZNF250-209ENST00000533543 EVA1CP58658 441 aa13.07□□□□□ -0.32
ZNF250-209ENST00000533543 SPDYE2Q495Y8 402 aa13.07□□□□□ -0.32
ZNF250-209ENST00000533543 CAMTA1Q9Y6Y1 1673 aa13.07□□□□□ -0.32
ZNF250-209ENST00000533543 SPATA31A1Q5TZJ5 1347 aa13.07□□□□□ -0.32
ZNF250-209ENST00000533543 A0A1W2PP64 1363 aa13.07□□□□□ -0.32
ZNF250-209ENST00000533543 LARP1Q6PKG0 1096 aaKnown RBP13.06□□□□□ -0.32
ZNF250-209ENST00000533543 KRT27Q7Z3Y8 459 aa13.06□□□□□ -0.32
ZNF250-209ENST00000533543 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
ZNF250-209ENST00000533543 SLC24A1O60721 1099 aa13.05□□□□□ -0.32
ZNF250-209ENST00000533543 TMF1P82094 1093 aa13.05□□□□□ -0.32
ZNF250-209ENST00000533543 NME9Q86XW9 330 aa13.05□□□□□ -0.32
ZNF250-209ENST00000533543 TERF2IPQ9NYB0 399 aa13.05□□□□□ -0.32
ZNF250-209ENST00000533543 USP35Q9P2H5 1018 aa13.05□□□□□ -0.32
ZNF250-209ENST00000533543 LMO7Q8WWI1 1683 aa13.05□□□□□ -0.32
ZNF250-209ENST00000533543 MON2Q7Z3U7 1717 aa13.05□□□□□ -0.32
ZNF250-209ENST00000533543 BRWD3Q6RI45 1802 aa13.04□□□□□ -0.32
ZNF250-209ENST00000533543 KCNH5Q8NCM2 988 aa13.04□□□□□ -0.32
ZNF250-209ENST00000533543 AATKQ6ZMQ8 1374 aa13.04□□□□□ -0.32
ZNF250-209ENST00000533543 EDC4Q6P2E9 1401 aaKnown RBP13.04□□□□□ -0.32
ZNF250-209ENST00000533543 COL5A2P05997 1499 aaPredicted RBP13.04□□□□□ -0.32
ZNF250-209ENST00000533543 ARHGEF25Q86VW2 580 aa13.03□□□□□ -0.32
ZNF250-209ENST00000533543 USP31Q70CQ4 1352 aa13.03□□□□□ -0.32
ZNF250-209ENST00000533543 NINLQ9Y2I6 1382 aa13.03□□□□□ -0.32
ZNF250-209ENST00000533543 FAM182BQ5T319 152 aa13.01□□□□□ -0.33
ZNF250-209ENST00000533543 TCP11L2Q8N4U5 519 aa13.01□□□□□ -0.33
ZNF250-209ENST00000533543 AXIN2Q9Y2T1 843 aa13.01□□□□□ -0.33
ZNF250-209ENST00000533543 NFAT5O94916 1531 aa13.01□□□□□ -0.33
ZNF250-209ENST00000533543 THSD7AQ9UPZ6 1657 aa13.01□□□□□ -0.33
ZNF250-209ENST00000533543 BLMP54132 1417 aaPredicted RBP13□□□□□ -0.33
ZNF250-209ENST00000533543 ANKRD36BQ8N2N9 1353 aa13□□□□□ -0.33
ZNF250-209ENST00000533543 BARGINQ6ZT62 677 aa13□□□□□ -0.33
ZNF250-209ENST00000533543 CCDC125Q86Z20 511 aa13□□□□□ -0.33
ZNF250-209ENST00000533543 CRB1P82279 1406 aa12.99□□□□□ -0.33
ZNF250-209ENST00000533543 CDCA8Q53HL2 280 aa12.99□□□□□ -0.33
ZNF250-209ENST00000533543 COL18A1P39060 1754 aa12.99□□□□□ -0.33
ZNF250-209ENST00000533543 OVOS2A0A0J9YW53 1432 aa12.98□□□□□ -0.33
ZNF250-209ENST00000533543 OVOS2Q6IE36 1432 aa12.98□□□□□ -0.33
ZNF250-209ENST00000533543 TOM1L2Q6ZVM7 507 aa12.98□□□□□ -0.33
ZNF250-209ENST00000533543 THRAP3Q9Y2W1 955 aaKnown RBP12.98□□□□□ -0.33
ZNF250-209ENST00000533543 WDR17Q8IZU2 1322 aa12.97□□□□□ -0.33
ZNF250-209ENST00000533543 USP54Q70EL1 1684 aa12.97□□□□□ -0.33
ZNF250-209ENST00000533543 CSB-PGBD3P0DP91 1061 aa12.97□□□□□ -0.33
ZNF250-209ENST00000533543 SF3B2Q13435 895 aaKnown RBP12.97□□□□□ -0.33
ZNF250-209ENST00000533543 DEFB132Q7Z7B7 95 aa12.97□□□□□ -0.33
ZNF250-209ENST00000533543 REM2Q8IYK8 340 aaPredicted RBP12.97□□□□□ -0.33
ZNF250-209ENST00000533543 PDE3BQ13370 1112 aa12.96□□□□□ -0.33
ZNF250-209ENST00000533543 HSPA5P11021 654 aaKnown RBP12.95□□□□□ -0.34
ZNF250-209ENST00000533543 EIF4G2P78344 907 aaKnown RBP eCLIP12.95□□□□□ -0.34
ZNF250-209ENST00000533543 COG3Q96JB2 828 aa12.95□□□□□ -0.34
ZNF250-209ENST00000533543 POLR3GLQ9BT43 218 aa12.94□□□□□ -0.34
ZNF250-209ENST00000533543 CARD10Q9BWT7 1032 aa12.94□□□□□ -0.34
ZNF250-209ENST00000533543 ABCC6O95255 1503 aa12.93□□□□□ -0.34
ZNF250-209ENST00000533543 FYB1O15117 783 aa12.93□□□□□ -0.34
ZNF250-209ENST00000533543 FBLN1P23142 703 aa12.93□□□□□ -0.34
ZNF250-209ENST00000533543 FAM196AQ6ZSG2 479 aa12.93□□□□□ -0.34
ZNF250-209ENST00000533543 GGNBP2Q9H3C7 697 aa12.93□□□□□ -0.34
ZNF250-209ENST00000533543 ERBB3P21860 1342 aa12.92□□□□□ -0.34
ZNF250-209ENST00000533543 RGPD5Q99666 1765 aa12.92□□□□□ -0.34
ZNF250-209ENST00000533543 TRIM37O94972 964 aa12.92□□□□□ -0.34
ZNF250-209ENST00000533543 BAG6P46379 1132 aa12.92□□□□□ -0.34
ZNF250-209ENST00000533543 CHRDL2Q6WN34 429 aa12.92□□□□□ -0.34
ZNF250-209ENST00000533543 ANKRD24Q8TF21 1146 aa12.92□□□□□ -0.34
ZNF250-209ENST00000533543 CARD14Q9BXL6 1004 aa12.92□□□□□ -0.34
ZNF250-209ENST00000533543 NSD3Q9BZ95 1437 aa12.91□□□□□ -0.34
ZNF250-209ENST00000533543 DDB1Q16531 1140 aa12.91□□□□□ -0.34
ZNF250-209ENST00000533543 NLRP2Q9NX02 1062 aa12.91□□□□□ -0.34
ZNF250-209ENST00000533543 MYOM1P52179 1685 aa12.91□□□□□ -0.34
ZNF250-209ENST00000533543 PARP4Q9UKK3 1724 aaKnown RBP12.91□□□□□ -0.34
ZNF250-209ENST00000533543 MAP3K19Q56UN5 1328 aa12.9□□□□□ -0.34
ZNF250-209ENST00000533543 DISP2A7MBM2 1401 aa12.9□□□□□ -0.34
ZNF250-209ENST00000533543 LTN1O94822 1766 aa12.9□□□□□ -0.34
ZNF250-209ENST00000533543 EN1Q05925 392 aaPredicted RBP12.9□□□□□ -0.34
ZNF250-209ENST00000533543 POTEHQ6S545 545 aa12.9□□□□□ -0.34
ZNF250-209ENST00000533543 IP6K1Q92551 441 aa12.9□□□□□ -0.34
ZNF250-209ENST00000533543 LTV1Q96GA3 475 aaPredicted RBP12.9□□□□□ -0.34
ZNF250-209ENST00000533543 CDCA7Q9BWT1 371 aaPredicted RBP12.9□□□□□ -0.34
ZNF250-209ENST00000533543 SSUH2Q9Y2M2 353 aa12.9□□□□□ -0.34
ZNF250-209ENST00000533543 CCDC7Q96M83 1385 aa12.9□□□□□ -0.34
ZNF250-209ENST00000533543 LRRC37A3O60309 1634 aa12.89□□□□□ -0.35
ZNF250-209ENST00000533543 AMPHP49418 695 aa12.89□□□□□ -0.35
ZNF250-209ENST00000533543 RRS1Q15050 365 aaKnown RBP12.89□□□□□ -0.35
ZNF250-209ENST00000533543 RGPD1P0DJD0 1748 aa12.88□□□□□ -0.35
ZNF250-209ENST00000533543 HOXC9P31274 260 aa12.88□□□□□ -0.35
ZNF250-209ENST00000533543 OVOS2A0A0G2JMS6 1433 aa12.88□□□□□ -0.35
ZNF250-209ENST00000533543 APBA3O96018 575 aa12.87□□□□□ -0.35
ZNF250-209ENST00000533543 MARCH10Q8NA82 808 aaPredicted RBP12.87□□□□□ -0.35
ZNF250-209ENST00000533543 WNK3Q9BYP7 1800 aa12.86□□□□□ -0.35
ZNF250-209ENST00000533543 TNS1Q9HBL0 1735 aaKnown RBP12.86□□□□□ -0.35
ZNF250-209ENST00000533543 SRCAPQ6ZRS2 3230 aa12.86□□□□□ -0.35
ZNF250-209ENST00000533543 C11orf95C9JLR9 678 aaPredicted RBP12.86□□□□□ -0.35
ZNF250-209ENST00000533543 EXOC5O00471 708 aa12.86□□□□□ -0.35
ZNF250-209ENST00000533543 EZH2Q15910 746 aaKnown RBP12.86□□□□□ -0.35
ZNF250-209ENST00000533543 RTL1A6NKG5 1358 aa12.85□□□□□ -0.35
ZNF250-209ENST00000533543 IL2RBP14784 551 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms