RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 FAM135BQ49AJ0 1406 aa6.95□□□□□ -1.3
CKAP5-212ENST00000533413 PTPRUQ92729 1446 aa6.95□□□□□ -1.3
CKAP5-212ENST00000533413 ADGRB2O60241 1585 aa6.95□□□□□ -1.3
CKAP5-212ENST00000533413 LRPPRCP42704 1394 aaKnown RBP6.95□□□□□ -1.3
CKAP5-212ENST00000533413 USP47Q96K76 1375 aa6.95□□□□□ -1.3
CKAP5-212ENST00000533413 TRPM1Q7Z4N2 1603 aa6.95□□□□□ -1.3
CKAP5-212ENST00000533413 GTF2E1P29083 439 aaPredicted RBP6.95□□□□□ -1.3
CKAP5-212ENST00000533413 APBB1IPQ7Z5R6 666 aaPredicted RBP6.95□□□□□ -1.3
CKAP5-212ENST00000533413 SLC26A8Q96RN1 970 aa6.95□□□□□ -1.3
CKAP5-212ENST00000533413 PPME1Q9Y570 386 aa6.95□□□□□ -1.3
CKAP5-212ENST00000533413 ROCK2O75116 1388 aaKnown RBP6.94□□□□□ -1.3
CKAP5-212ENST00000533413 MSH6P52701 1360 aa6.94□□□□□ -1.3
CKAP5-212ENST00000533413 ADGRB1O14514 1584 aa6.94□□□□□ -1.3
CKAP5-212ENST00000533413 RRP9O43818 475 aaKnown RBP6.94□□□□□ -1.3
CKAP5-212ENST00000533413 TOM1O60784 492 aa6.94□□□□□ -1.3
CKAP5-212ENST00000533413 ABCC11Q96J66 1382 aa6.94□□□□□ -1.3
CKAP5-212ENST00000533413 ARHGEF28Q8N1W1 1705 aaKnown RBP6.94□□□□□ -1.3
CKAP5-212ENST00000533413 CENPJQ9HC77 1338 aaPredicted RBP6.93□□□□□ -1.3
CKAP5-212ENST00000533413 ADGRL3Q9HAR2 1447 aa6.93□□□□□ -1.3
CKAP5-212ENST00000533413 NEFMP07197 916 aa6.93□□□□□ -1.3
CKAP5-212ENST00000533413 RRP1P56182 461 aaKnown RBP6.93□□□□□ -1.3
CKAP5-212ENST00000533413 KCNV2Q8TDN2 545 aa6.93□□□□□ -1.3
CKAP5-212ENST00000533413 C14orf93Q9H972 538 aaKnown RBP6.93□□□□□ -1.3
CKAP5-212ENST00000533413 METP08581 1390 aa6.93□□□□□ -1.3
CKAP5-212ENST00000533413 TMEM94Q12767 1356 aa6.93□□□□□ -1.3
CKAP5-212ENST00000533413 YTHDC2Q9H6S0 1430 aaKnown RBP6.93□□□□□ -1.3
CKAP5-212ENST00000533413 RALBP1Q15311 655 aa6.93□□□□□ -1.3
CKAP5-212ENST00000533413 PROSER2Q86WR7 435 aaPredicted RBP6.93□□□□□ -1.3
CKAP5-212ENST00000533413 CARD11Q9BXL7 1154 aa6.93□□□□□ -1.3
CKAP5-212ENST00000533413 RCAN3Q9UKA8 241 aa6.93□□□□□ -1.3
CKAP5-212ENST00000533413 ADGRF5Q8IZF2 1346 aa6.93□□□□□ -1.3
CKAP5-212ENST00000533413 PEX14O75381 377 aa6.92□□□□□ -1.3
CKAP5-212ENST00000533413 PDE4AP27815 886 aa6.92□□□□□ -1.3
CKAP5-212ENST00000533413 NKX1-1Q15270 411 aaPredicted RBP6.92□□□□□ -1.3
CKAP5-212ENST00000533413 SPATA32Q96LK8 384 aa6.92□□□□□ -1.3
CKAP5-212ENST00000533413 AMOTL2Q9Y2J4 779 aa6.92□□□□□ -1.3
CKAP5-212ENST00000533413 FMN2Q9NZ56 1722 aa6.92□□□□□ -1.3
CKAP5-212ENST00000533413 KIF1AQ12756 1690 aa6.92□□□□□ -1.3
CKAP5-212ENST00000533413 TPD52L2O43399 206 aaKnown RBP6.92□□□□□ -1.3
CKAP5-212ENST00000533413 RGL3Q3MIN7 710 aa6.92□□□□□ -1.3
CKAP5-212ENST00000533413 EXOC6Q8TAG9 804 aa6.92□□□□□ -1.3
CKAP5-212ENST00000533413 TRAK2O60296 914 aa6.92□□□□□ -1.3
CKAP5-212ENST00000533413 MS4A1P11836 297 aa6.92□□□□□ -1.3
CKAP5-212ENST00000533413 NUTM2DQ5VT03 806 aaPredicted RBP6.92□□□□□ -1.3
CKAP5-212ENST00000533413 MYH16Q9H6N6 1097 aa6.92□□□□□ -1.3
CKAP5-212ENST00000533413 SUGT1Q9Y2Z0 365 aa6.92□□□□□ -1.3
CKAP5-212ENST00000533413 MYBBP1AQ9BQG0 1328 aaKnown RBP6.91□□□□□ -1.3
CKAP5-212ENST00000533413 ROBO1Q9Y6N7 1651 aa6.91□□□□□ -1.3
CKAP5-212ENST00000533413 PDE3BQ13370 1112 aa6.91□□□□□ -1.3
CKAP5-212ENST00000533413 ANKRD13AQ8IZ07 590 aa6.91□□□□□ -1.3
CKAP5-212ENST00000533413 PPP1R1BQ9UD71 204 aaPredicted RBP6.91□□□□□ -1.3
CKAP5-212ENST00000533413 ITSN1Q15811 1721 aa6.91□□□□□ -1.3
CKAP5-212ENST00000533413 EIF3AQ14152 1382 aaKnown RBP6.91□□□□□ -1.3
CKAP5-212ENST00000533413 BARGINQ6ZT62 677 aa6.91□□□□□ -1.3
CKAP5-212ENST00000533413 DCAF11Q8TEB1 546 aa6.91□□□□□ -1.3
CKAP5-212ENST00000533413 DDRGK1Q96HY6 314 aa6.91□□□□□ -1.3
CKAP5-212ENST00000533413 NHSL1Q5SYE7 1610 aa6.91□□□□□ -1.3
CKAP5-212ENST00000533413 AHDC1Q5TGY3 1603 aaPredicted RBP6.91□□□□□ -1.3
CKAP5-212ENST00000533413 BRD4O60885 1362 aaPredicted RBP6.91□□□□□ -1.3
CKAP5-212ENST00000533413 KTN1Q86UP2 1357 aaKnown RBP6.9□□□□□ -1.3
CKAP5-212ENST00000533413 ANKRD62A6NC57 917 aa6.9□□□□□ -1.3
CKAP5-212ENST00000533413 RIOK3O14730 519 aaKnown RBP6.9□□□□□ -1.3
CKAP5-212ENST00000533413 SLC4A2P04920 1241 aa6.9□□□□□ -1.3
CKAP5-212ENST00000533413 CADPS2Q86UW7 1296 aa6.9□□□□□ -1.3
CKAP5-212ENST00000533413 MICAL1Q8TDZ2 1067 aa6.9□□□□□ -1.3
CKAP5-212ENST00000533413 C19orf44Q9H6X5 657 aa6.9□□□□□ -1.3
CKAP5-212ENST00000533413 UBAP1LF5GYI3 381 aa6.9□□□□□ -1.31
CKAP5-212ENST00000533413 FAM117AQ9C073 453 aa6.9□□□□□ -1.31
CKAP5-212ENST00000533413 PHLPP1O60346 1717 aa6.89□□□□□ -1.31
CKAP5-212ENST00000533413 RALGAPBQ86X10 1494 aa6.89□□□□□ -1.31
CKAP5-212ENST00000533413 CARNS1A5YM72 827 aa6.89□□□□□ -1.31
CKAP5-212ENST00000533413 FOXD4Q12950 439 aaPredicted RBP6.89□□□□□ -1.31
CKAP5-212ENST00000533413 BACH2Q9BYV9 841 aa6.89□□□□□ -1.31
CKAP5-212ENST00000533413 PRDM4Q9UKN5 801 aa6.89□□□□□ -1.31
CKAP5-212ENST00000533413 ROBO2Q9HCK4 1378 aa6.89□□□□□ -1.31
CKAP5-212ENST00000533413 NLRP13Q86W25 1043 aa6.89□□□□□ -1.31
CKAP5-212ENST00000533413 IGSF5Q9NSI5 407 aa6.89□□□□□ -1.31
CKAP5-212ENST00000533413 TERF2IPQ9NYB0 399 aa6.89□□□□□ -1.31
CKAP5-212ENST00000533413 ATF5Q9Y2D1 282 aaPredicted RBP6.89□□□□□ -1.31
CKAP5-212ENST00000533413 QRICH2Q9H0J4 1663 aa6.89□□□□□ -1.31
CKAP5-212ENST00000533413 ST20-MTHFSA0A0A6YYL1 179 aa6.88□□□□□ -1.31
CKAP5-212ENST00000533413 GSE1Q14687 1217 aa6.88□□□□□ -1.31
CKAP5-212ENST00000533413 ANKARQ7Z5J8 1434 aa6.88□□□□□ -1.31
CKAP5-212ENST00000533413 SHPRHQ149N8 1683 aa6.88□□□□□ -1.31
CKAP5-212ENST00000533413 ATF3P18847 181 aa6.88□□□□□ -1.31
CKAP5-212ENST00000533413 CANXP27824 592 aaKnown RBP6.88□□□□□ -1.31
CKAP5-212ENST00000533413 GPRASP1Q5JY77 1395 aa6.88□□□□□ -1.31
CKAP5-212ENST00000533413 MST1RQ04912 1400 aa6.88□□□□□ -1.31
CKAP5-212ENST00000533413 RAB11FIP3O75154 756 aa6.87□□□□□ -1.31
CKAP5-212ENST00000533413 RBM26Q5T8P6 1007 aaKnown RBP6.87□□□□□ -1.31
CKAP5-212ENST00000533413 NME8Q8N427 588 aa6.87□□□□□ -1.31
CKAP5-212ENST00000533413 TOPAZ1Q8N9V7 1692 aa6.87□□□□□ -1.31
CKAP5-212ENST00000533413 CALD1Q05682 793 aaKnown RBP6.87□□□□□ -1.31
CKAP5-212ENST00000533413 CFAP70Q5T0N1 1121 aa6.87□□□□□ -1.31
CKAP5-212ENST00000533413 TULP4Q9NRJ4 1543 aa6.86□□□□□ -1.31
CKAP5-212ENST00000533413 MAP4K4O95819 1239 aaPredicted RBP6.86□□□□□ -1.31
CKAP5-212ENST00000533413 ILDR1Q86SU0 546 aaPredicted RBP6.86□□□□□ -1.31
CKAP5-212ENST00000533413 KDM4CQ9H3R0 1056 aa6.86□□□□□ -1.31
CKAP5-212ENST00000533413 COL16A1Q07092 1604 aaPredicted RBP6.86□□□□□ -1.31
CKAP5-212ENST00000533413 GORABQ5T7V8 394 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms