RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 PARP4Q9UKK3 1724 aaKnown RBP32.99■■■□□ 2.87
SMPD1-209ENST00000533196 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.99■■■□□ 2.87
SMPD1-209ENST00000533196 PDE3BQ13370 1112 aa32.98■■■□□ 2.87
SMPD1-209ENST00000533196 A0A1W2PP64 1363 aa32.97■■■□□ 2.87
SMPD1-209ENST00000533196 FAM182BQ5T319 152 aa32.97■■■□□ 2.87
SMPD1-209ENST00000533196 WDR17Q8IZU2 1322 aa32.97■■■□□ 2.87
SMPD1-209ENST00000533196 AXIN2Q9Y2T1 843 aa32.96■■■□□ 2.87
SMPD1-209ENST00000533196 USP47Q96K76 1375 aa32.96■■■□□ 2.87
SMPD1-209ENST00000533196 TOM1L2Q6ZVM7 507 aa32.95■■■□□ 2.87
SMPD1-209ENST00000533196 RGPD5Q99666 1765 aa32.95■■■□□ 2.87
SMPD1-209ENST00000533196 DISP2A7MBM2 1401 aa32.94■■■□□ 2.86
SMPD1-209ENST00000533196 NME9Q86XW9 330 aa32.94■■■□□ 2.86
SMPD1-209ENST00000533196 PCGF6Q9BYE7 350 aa32.94■■■□□ 2.86
SMPD1-209ENST00000533196 TNS1Q9HBL0 1735 aaKnown RBP32.94■■■□□ 2.86
SMPD1-209ENST00000533196 SOX12O15370 315 aa32.93■■■□□ 2.86
SMPD1-209ENST00000533196 C11orf95C9JLR9 678 aaPredicted RBP32.92■■■□□ 2.86
SMPD1-209ENST00000533196 TMF1P82094 1093 aa32.92■■■□□ 2.86
SMPD1-209ENST00000533196 CDCA7Q9BWT1 371 aaPredicted RBP32.9■■■□□ 2.86
SMPD1-209ENST00000533196 WNK3Q9BYP7 1800 aa32.9■■■□□ 2.86
SMPD1-209ENST00000533196 CARD10Q9BWT7 1032 aa32.87■■■□□ 2.85
SMPD1-209ENST00000533196 LTN1O94822 1766 aa32.87■■■□□ 2.85
SMPD1-209ENST00000533196 OVOS2A0A0J9YW53 1432 aa32.86■■■□□ 2.85
SMPD1-209ENST00000533196 OVOS2Q6IE36 1432 aa32.86■■■□□ 2.85
SMPD1-209ENST00000533196 CSB-PGBD3P0DP91 1061 aa32.86■■■□□ 2.85
SMPD1-209ENST00000533196 CDCA8Q53HL2 280 aa32.86■■■□□ 2.85
SMPD1-209ENST00000533196 TRIM37O94972 964 aa32.85■■■□□ 2.85
SMPD1-209ENST00000533196 ANKRD36BQ8N2N9 1353 aa32.84■■■□□ 2.85
SMPD1-209ENST00000533196 EN1Q05925 392 aaPredicted RBP32.84■■■□□ 2.85
SMPD1-209ENST00000533196 LRRC37A3O60309 1634 aa32.84■■■□□ 2.85
SMPD1-209ENST00000533196 CCDC7Q96M83 1385 aa32.83■■■□□ 2.85
SMPD1-209ENST00000533196 DDB1Q16531 1140 aa32.83■■■□□ 2.85
SMPD1-209ENST00000533196 PARD3Q8TEW0 1356 aa32.83■■■□□ 2.85
SMPD1-209ENST00000533196 OVOS2A0A0G2JMS6 1433 aa32.81■■■□□ 2.84
SMPD1-209ENST00000533196 PEAK1Q9H792 1746 aa32.79■■■□□ 2.84
SMPD1-209ENST00000533196 ERBB3P21860 1342 aa32.78■■■□□ 2.84
SMPD1-209ENST00000533196 APBA3O96018 575 aa32.77■■■□□ 2.84
SMPD1-209ENST00000533196 COG3Q96JB2 828 aa32.77■■■□□ 2.84
SMPD1-209ENST00000533196 CAMKK2Q96RR4 588 aa32.77■■■□□ 2.84
SMPD1-209ENST00000533196 SBF2Q86WG5 1849 aa32.74■■■□□ 2.83
SMPD1-209ENST00000533196 EZH2Q15910 746 aaKnown RBP32.74■■■□□ 2.83
SMPD1-209ENST00000533196 BCL9O00512 1426 aa32.73■■■□□ 2.83
SMPD1-209ENST00000533196 IP6K1Q92551 441 aa32.71■■■□□ 2.83
SMPD1-209ENST00000533196 EXOC5O00471 708 aa32.7■■■□□ 2.83
SMPD1-209ENST00000533196 CCER1Q8TC90 406 aaPredicted RBP32.7■■■□□ 2.83
SMPD1-209ENST00000533196 ANKRD24Q8TF21 1146 aa32.7■■■□□ 2.83
SMPD1-209ENST00000533196 RREB1Q92766 1687 aa32.69■■■□□ 2.82
SMPD1-209ENST00000533196 NLRP2Q9NX02 1062 aa32.69■■■□□ 2.82
SMPD1-209ENST00000533196 FAM208AQ9UK61 1670 aaKnown RBP32.69■■■□□ 2.82
SMPD1-209ENST00000533196 MARCH10Q8NA82 808 aaPredicted RBP32.67■■■□□ 2.82
SMPD1-209ENST00000533196 RGPD3A6NKT7 1758 aaPredicted RBP32.66■■■□□ 2.82
SMPD1-209ENST00000533196 RGPD4Q7Z3J3 1758 aa32.66■■■□□ 2.82
SMPD1-209ENST00000533196 TNS2Q63HR2 1409 aa32.66■■■□□ 2.82
SMPD1-209ENST00000533196 FYB1O15117 783 aa32.65■■■□□ 2.82
SMPD1-209ENST00000533196 MYOM1P52179 1685 aa32.65■■■□□ 2.82
SMPD1-209ENST00000533196 SRCAPQ6ZRS2 3230 aa32.64■■■□□ 2.82
SMPD1-209ENST00000533196 KIF20BQ96Q89 1820 aa32.63■■■□□ 2.81
SMPD1-209ENST00000533196 LRP5O75197 1615 aa32.63■■■□□ 2.81
SMPD1-209ENST00000533196 MAP3K19Q56UN5 1328 aa32.63■■■□□ 2.81
SMPD1-209ENST00000533196 PSDA5PKW4 1024 aaPredicted RBP32.63■■■□□ 2.81
SMPD1-209ENST00000533196 IL2RBP14784 551 aa32.63■■■□□ 2.81
SMPD1-209ENST00000533196 BCL11BQ9C0K0 894 aaPredicted RBP32.63■■■□□ 2.81
SMPD1-209ENST00000533196 NUP188Q5SRE5 1749 aa32.62■■■□□ 2.81
SMPD1-209ENST00000533196 RTL1A6NKG5 1358 aa32.61■■■□□ 2.81
SMPD1-209ENST00000533196 PLSCR1O15162 318 aa32.61■■■□□ 2.81
SMPD1-209ENST00000533196 AMPHP49418 695 aa32.6■■■□□ 2.81
SMPD1-209ENST00000533196 HOXC9P31274 260 aa32.59■■■□□ 2.81
SMPD1-209ENST00000533196 GGNBP2Q9H3C7 697 aa32.59■■■□□ 2.81
SMPD1-209ENST00000533196 R3HDM1Q15032 1099 aaKnown RBP32.58■■■□□ 2.81
SMPD1-209ENST00000533196 NBPF14Q5TI25 921 aa32.57■■■□□ 2.8
SMPD1-209ENST00000533196 EIF4G2P78344 907 aaKnown RBP eCLIP32.56■■■□□ 2.8
SMPD1-209ENST00000533196 LTV1Q96GA3 475 aaPredicted RBP32.53■■■□□ 2.8
SMPD1-209ENST00000533196 CARD14Q9BXL6 1004 aa32.53■■■□□ 2.8
SMPD1-209ENST00000533196 FBLN1P23142 703 aa32.52■■■□□ 2.8
SMPD1-209ENST00000533196 KIF24Q5T7B8 1368 aa32.52■■■□□ 2.8
SMPD1-209ENST00000533196 NSD3Q9BZ95 1437 aa32.51■■■□□ 2.8
SMPD1-209ENST00000533196 NHSQ6T4R5 1651 aa32.5■■■□□ 2.79
SMPD1-209ENST00000533196 RRS1Q15050 365 aaKnown RBP32.49■■■□□ 2.79
SMPD1-209ENST00000533196 KAT6BQ8WYB5 2073 aa32.47■■■□□ 2.79
SMPD1-209ENST00000533196 HSPA5P11021 654 aaKnown RBP32.47■■■□□ 2.79
SMPD1-209ENST00000533196 PTF1AQ7RTS3 328 aa32.47■■■□□ 2.79
SMPD1-209ENST00000533196 SMG6Q86US8 1419 aaKnown RBP32.47■■■□□ 2.79
SMPD1-209ENST00000533196 RGPD2P0DJD1 1756 aa32.47■■■□□ 2.79
SMPD1-209ENST00000533196 FLT4P35916 1363 aa32.45■■■□□ 2.79
SMPD1-209ENST00000533196 CGNL1Q0VF96 1302 aa32.45■■■□□ 2.78
SMPD1-209ENST00000533196 INSRP06213 1382 aa32.45■■■□□ 2.78
SMPD1-209ENST00000533196 KCNQ2O43526 872 aa32.4■■■□□ 2.78
SMPD1-209ENST00000533196 PROM2Q8N271 834 aa32.39■■■□□ 2.78
SMPD1-209ENST00000533196 POLR3GLQ9BT43 218 aa32.39■■■□□ 2.78
SMPD1-209ENST00000533196 TXNRD1Q16881 649 aa32.38■■■□□ 2.77
SMPD1-209ENST00000533196 HSP90AB2PQ58FF8 381 aa32.38■■■□□ 2.77
SMPD1-209ENST00000533196 NBPF6Q5VWK0 638 aa32.38■■■□□ 2.77
SMPD1-209ENST00000533196 NBPF4Q96M43 638 aa32.38■■■□□ 2.77
SMPD1-209ENST00000533196 ACSBG1Q96GR2 724 aa32.37■■■□□ 2.77
SMPD1-209ENST00000533196 ANKRD26Q9UPS8 1709 aa32.37■■■□□ 2.77
SMPD1-209ENST00000533196 BTAF1O14981 1849 aa32.36■■■□□ 2.77
SMPD1-209ENST00000533196 MAP2P11137 1827 aaKnown RBP32.36■■■□□ 2.77
SMPD1-209ENST00000533196 ZCRB1Q8TBF4 217 aaKnown RBP32.36■■■□□ 2.77
SMPD1-209ENST00000533196 DDX54Q8TDD1 881 aaKnown RBP32.36■■■□□ 2.77
SMPD1-209ENST00000533196 MEGF6O75095 1541 aa32.35■■■□□ 2.77
SMPD1-209ENST00000533196 SHANK3Q9BYB0 1731 aa32.34■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms