RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 JCADQ9P266 1359 aa18.86■□□□□ 0.61
HIF3A-215ENST00000533145 HSP90AB2PQ58FF8 381 aa18.86■□□□□ 0.61
HIF3A-215ENST00000533145 NUDCQ9Y266 331 aa18.86■□□□□ 0.61
HIF3A-215ENST00000533145 IL13P35225 146 aa18.85■□□□□ 0.61
HIF3A-215ENST00000533145 ZC3H6P61129 1189 aaKnown RBP18.85■□□□□ 0.61
HIF3A-215ENST00000533145 RGPD5Q99666 1765 aa18.85■□□□□ 0.61
HIF3A-215ENST00000533145 BLMP54132 1417 aaPredicted RBP18.84■□□□□ 0.61
HIF3A-215ENST00000533145 KIAA0232Q92628 1395 aa18.83■□□□□ 0.61
HIF3A-215ENST00000533145 HAP1P54257 671 aaPredicted RBP18.83■□□□□ 0.6
HIF3A-215ENST00000533145 EIF4A2Q14240 407 aaKnown RBP18.83■□□□□ 0.6
HIF3A-215ENST00000533145 WDR43Q15061 677 aaKnown RBP eCLIP18.83■□□□□ 0.6
HIF3A-215ENST00000533145 FAM9BQ8IZU0 186 aa18.83■□□□□ 0.6
HIF3A-215ENST00000533145 PLEKHG5O94827 1062 aa18.82■□□□□ 0.6
HIF3A-215ENST00000533145 ADAMTS8Q9UP79 889 aa18.82■□□□□ 0.6
HIF3A-215ENST00000533145 RGPD1P0DJD0 1748 aa18.82■□□□□ 0.6
HIF3A-215ENST00000533145 LMO7Q8WWI1 1683 aa18.82■□□□□ 0.6
HIF3A-215ENST00000533145 SPATA31A6Q5VVP1 1343 aa18.8■□□□□ 0.6
HIF3A-215ENST00000533145 AXIN2Q9Y2T1 843 aa18.8■□□□□ 0.6
HIF3A-215ENST00000533145 COL14A1Q05707 1796 aaKnown RBP18.79■□□□□ 0.6
HIF3A-215ENST00000533145 PRDM11Q9NQV5 511 aa18.79■□□□□ 0.6
HIF3A-215ENST00000533145 FAM83GA6ND36 823 aa18.78■□□□□ 0.6
HIF3A-215ENST00000533145 FAM208AQ9UK61 1670 aaKnown RBP18.77■□□□□ 0.6
HIF3A-215ENST00000533145 FCHSD2O94868 740 aa18.77■□□□□ 0.6
HIF3A-215ENST00000533145 U2AF1L5P0DN76 240 aaPredicted RBP18.77■□□□□ 0.6
HIF3A-215ENST00000533145 U2AF1Q01081 240 aaKnown RBP eCLIP18.77■□□□□ 0.6
HIF3A-215ENST00000533145 CHRNA2Q15822 529 aa18.77■□□□□ 0.6
HIF3A-215ENST00000533145 CAMTA1Q9Y6Y1 1673 aa18.76■□□□□ 0.59
HIF3A-215ENST00000533145 ZBTB7CA1YPR0 619 aa18.76■□□□□ 0.59
HIF3A-215ENST00000533145 U2SURPO15042 1029 aaKnown RBP18.76■□□□□ 0.59
HIF3A-215ENST00000533145 PNNQ9H307 717 aaKnown RBP18.76■□□□□ 0.59
HIF3A-215ENST00000533145 RGPD2P0DJD1 1756 aa18.76■□□□□ 0.59
HIF3A-215ENST00000533145 ERBB3P21860 1342 aa18.75■□□□□ 0.59
HIF3A-215ENST00000533145 IGSF1Q8N6C5 1336 aa18.75■□□□□ 0.59
HIF3A-215ENST00000533145 ANKRD24Q8TF21 1146 aa18.75■□□□□ 0.59
HIF3A-215ENST00000533145 EYA1Q99502 592 aa18.75■□□□□ 0.59
HIF3A-215ENST00000533145 NCAPD2Q15021 1401 aa18.74■□□□□ 0.59
HIF3A-215ENST00000533145 KDRP35968 1356 aa18.73■□□□□ 0.59
HIF3A-215ENST00000533145 NWD2Q9ULI1 1742 aa18.72■□□□□ 0.59
HIF3A-215ENST00000533145 RUNDC1Q96C34 613 aa18.72■□□□□ 0.59
HIF3A-215ENST00000533145 PLEKHF1Q96S99 279 aa18.72■□□□□ 0.59
HIF3A-215ENST00000533145 RSPH6AQ9H0K4 717 aa18.72■□□□□ 0.59
HIF3A-215ENST00000533145 COL5A2P05997 1499 aaPredicted RBP18.71■□□□□ 0.59
HIF3A-215ENST00000533145 PLCH1Q4KWH8 1693 aa18.71■□□□□ 0.59
HIF3A-215ENST00000533145 NUTM2BA6NNL0 878 aaPredicted RBP18.71■□□□□ 0.59
HIF3A-215ENST00000533145 NUTM2EB1AL46 878 aaPredicted RBP18.71■□□□□ 0.59
HIF3A-215ENST00000533145 NBPF6Q5VWK0 638 aa18.71■□□□□ 0.59
HIF3A-215ENST00000533145 NUTM2AQ8IVF1 878 aaPredicted RBP18.71■□□□□ 0.59
HIF3A-215ENST00000533145 LTV1Q96GA3 475 aaPredicted RBP18.71■□□□□ 0.59
HIF3A-215ENST00000533145 NBPF4Q96M43 638 aa18.71■□□□□ 0.59
HIF3A-215ENST00000533145 NCBP3Q53F19 620 aaKnown RBP18.7■□□□□ 0.58
HIF3A-215ENST00000533145 SULT6B1Q6IMI4 303 aa18.7■□□□□ 0.58
HIF3A-215ENST00000533145 WDR17Q8IZU2 1322 aa18.7■□□□□ 0.58
HIF3A-215ENST00000533145 SLIT2O94813 1529 aa18.69■□□□□ 0.58
HIF3A-215ENST00000533145 ADAMTS2O95450 1211 aa18.69■□□□□ 0.58
HIF3A-215ENST00000533145 LRP6O75581 1613 aa18.68■□□□□ 0.58
HIF3A-215ENST00000533145 HMOX1P09601 288 aa18.68■□□□□ 0.58
HIF3A-215ENST00000533145 NGEFQ8N5V2 710 aa18.68■□□□□ 0.58
HIF3A-215ENST00000533145 BTG4Q9NY30 223 aa18.68■□□□□ 0.58
HIF3A-215ENST00000533145 RGS17Q9UGC6 210 aaPredicted RBP18.68■□□□□ 0.58
HIF3A-215ENST00000533145 NRAPQ86VF7 1730 aa18.68■□□□□ 0.58
HIF3A-215ENST00000533145 CSB-PGBD3P0DP91 1061 aa18.66■□□□□ 0.58
HIF3A-215ENST00000533145 PRKAR2BP31323 418 aa18.66■□□□□ 0.58
HIF3A-215ENST00000533145 EVA1CP58658 441 aa18.66■□□□□ 0.58
HIF3A-215ENST00000533145 AEBP1Q8IUX7 1158 aa18.66■□□□□ 0.58
HIF3A-215ENST00000533145 CCDC146Q8IYE0 955 aa18.66■□□□□ 0.58
HIF3A-215ENST00000533145 FNBP4Q8N3X1 1017 aaPredicted RBP18.66■□□□□ 0.58
HIF3A-215ENST00000533145 PLEKHG2Q9H7P9 1386 aa18.66■□□□□ 0.58
HIF3A-215ENST00000533145 CARD10Q9BWT7 1032 aa18.65■□□□□ 0.58
HIF3A-215ENST00000533145 APAF1O14727 1248 aa18.64■□□□□ 0.57
HIF3A-215ENST00000533145 NEFMP07197 916 aa18.64■□□□□ 0.57
HIF3A-215ENST00000533145 HNRNPUQ00839 825 aaKnown RBP eCLIP18.64■□□□□ 0.57
HIF3A-215ENST00000533145 TCP11L2Q8N4U5 519 aa18.64■□□□□ 0.57
HIF3A-215ENST00000533145 NLRP2Q9NX02 1062 aa18.64■□□□□ 0.57
HIF3A-215ENST00000533145 CRB1P82279 1406 aa18.64■□□□□ 0.57
HIF3A-215ENST00000533145 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.63■□□□□ 0.57
HIF3A-215ENST00000533145 LARP1Q6PKG0 1096 aaKnown RBP18.63■□□□□ 0.57
HIF3A-215ENST00000533145 TOM1L2Q6ZVM7 507 aa18.62■□□□□ 0.57
HIF3A-215ENST00000533145 USHBP1Q8N6Y0 703 aa18.62■□□□□ 0.57
HIF3A-215ENST00000533145 NGLY1Q96IV0 654 aa18.62■□□□□ 0.57
HIF3A-215ENST00000533145 PHACTR3Q96KR7 559 aa18.62■□□□□ 0.57
HIF3A-215ENST00000533145 STRN4Q9NRL3 753 aa18.62■□□□□ 0.57
HIF3A-215ENST00000533145 MAPK8IP3Q9UPT6 1336 aa18.62■□□□□ 0.57
HIF3A-215ENST00000533145 BCL9LQ86UU0 1499 aa18.61■□□□□ 0.57
HIF3A-215ENST00000533145 TMPOP42166 694 aaKnown RBP18.61■□□□□ 0.57
HIF3A-215ENST00000533145 UNC5CLQ8IV45 518 aa18.61■□□□□ 0.57
HIF3A-215ENST00000533145 YTHDC1Q96MU7 727 aaKnown RBP18.61■□□□□ 0.57
HIF3A-215ENST00000533145 C8orf37Q96NL8 207 aa18.61■□□□□ 0.57
HIF3A-215ENST00000533145 DLG5Q8TDM6 1919 aa18.61■□□□□ 0.57
HIF3A-215ENST00000533145 ZBED9Q6R2W3 1325 aa18.6■□□□□ 0.57
HIF3A-215ENST00000533145 CCDC27Q2M243 656 aa18.6■□□□□ 0.57
HIF3A-215ENST00000533145 NFE2L2Q16236 605 aa18.58■□□□□ 0.56
HIF3A-215ENST00000533145 AMOTQ4VCS5 1084 aa18.58■□□□□ 0.56
HIF3A-215ENST00000533145 MEX3CQ5U5Q3 659 aaKnown RBP18.58■□□□□ 0.56
HIF3A-215ENST00000533145 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.58■□□□□ 0.56
HIF3A-215ENST00000533145 THRAP3Q9Y2W1 955 aaKnown RBP18.58■□□□□ 0.56
HIF3A-215ENST00000533145 PARP4Q9UKK3 1724 aaKnown RBP18.57■□□□□ 0.56
HIF3A-215ENST00000533145 POTEAQ6S8J7 498 aa18.57■□□□□ 0.56
HIF3A-215ENST00000533145 RAPGEF4Q8WZA2 1011 aa18.57■□□□□ 0.56
HIF3A-215ENST00000533145 SPATA31A1Q5TZJ5 1347 aa18.56■□□□□ 0.56
HIF3A-215ENST00000533145 ZNF521Q96K83 1311 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms