RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 A0A1W2PP64 1363 aa18.55■□□□□ 0.56
CAPN1-224ENST00000533129 ESPNB1AK53 854 aa18.55■□□□□ 0.56
CAPN1-224ENST00000533129 TERF2IPQ9NYB0 399 aa18.55■□□□□ 0.56
CAPN1-224ENST00000533129 TNNT2P45379 298 aaPredicted RBP18.55■□□□□ 0.56
CAPN1-224ENST00000533129 MTHFSP49914 203 aa18.55■□□□□ 0.56
CAPN1-224ENST00000533129 TBX22Q9Y458 520 aa18.54■□□□□ 0.56
CAPN1-224ENST00000533129 CD163L1Q9NR16 1453 aa18.53■□□□□ 0.56
CAPN1-224ENST00000533129 PTMSP20962 102 aa18.53■□□□□ 0.56
CAPN1-224ENST00000533129 HSP90AA2PQ14568 343 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-224ENST00000533129 WASLO00401 505 aaPredicted RBP18.52■□□□□ 0.56
CAPN1-224ENST00000533129 TRIM27P14373 513 aa18.52■□□□□ 0.56
CAPN1-224ENST00000533129 ROBO2Q9HCK4 1378 aa18.52■□□□□ 0.56
CAPN1-224ENST00000533129 ATP7BP35670 1465 aa18.52■□□□□ 0.56
CAPN1-224ENST00000533129 GBP4Q96PP9 640 aa18.52■□□□□ 0.55
CAPN1-224ENST00000533129 SMC4Q9NTJ3 1288 aa18.52■□□□□ 0.55
CAPN1-224ENST00000533129 SKOR2Q2VWA4 1001 aaPredicted RBP18.51■□□□□ 0.55
CAPN1-224ENST00000533129 HDGFL2Q7Z4V5 671 aaPredicted RBP18.51■□□□□ 0.55
CAPN1-224ENST00000533129 ATF7IPQ6VMQ6 1270 aa18.5■□□□□ 0.55
CAPN1-224ENST00000533129 TNPO1Q92973 898 aaKnown RBP18.5■□□□□ 0.55
CAPN1-224ENST00000533129 SLC26A8Q96RN1 970 aa18.5■□□□□ 0.55
CAPN1-224ENST00000533129 PTPRUQ92729 1446 aa18.5■□□□□ 0.55
CAPN1-224ENST00000533129 ERBB4Q15303 1308 aa18.5■□□□□ 0.55
CAPN1-224ENST00000533129 ITPRIPQ8IWB1 547 aa18.49■□□□□ 0.55
CAPN1-224ENST00000533129 PTCH1Q13635 1447 aa18.49■□□□□ 0.55
CAPN1-224ENST00000533129 RAB3GAP1Q15042 981 aa18.49■□□□□ 0.55
CAPN1-224ENST00000533129 TRIM44Q96DX7 344 aaPredicted RBP18.49■□□□□ 0.55
CAPN1-224ENST00000533129 U2AF1L5P0DN76 240 aaPredicted RBP18.48■□□□□ 0.55
CAPN1-224ENST00000533129 U2AF1Q01081 240 aaKnown RBP eCLIP18.48■□□□□ 0.55
CAPN1-224ENST00000533129 CABP1Q9NZU7 370 aa18.48■□□□□ 0.55
CAPN1-224ENST00000533129 EXOSC9Q06265 439 aaKnown RBP18.47■□□□□ 0.55
CAPN1-224ENST00000533129 TSR2Q969E8 191 aaKnown RBP18.47■□□□□ 0.55
CAPN1-224ENST00000533129 NUCB1Q02818 461 aa18.47■□□□□ 0.55
CAPN1-224ENST00000533129 SSH1Q8WYL5 1049 aa18.47■□□□□ 0.55
CAPN1-224ENST00000533129 ZBTB40Q9NUA8 1239 aa18.47■□□□□ 0.55
CAPN1-224ENST00000533129 PIK3R4Q99570 1358 aa18.46■□□□□ 0.55
CAPN1-224ENST00000533129 HSP90AB1P08238 724 aaKnown RBP18.46■□□□□ 0.55
CAPN1-224ENST00000533129 ANKRD26Q9UPS8 1709 aa18.46■□□□□ 0.55
CAPN1-224ENST00000533129 IL16Q14005 1332 aa18.46■□□□□ 0.55
CAPN1-224ENST00000533129 SETD1BQ9UPS6 1966 aaKnown RBP18.46■□□□□ 0.55
CAPN1-224ENST00000533129 PPIP5K1Q6PFW1 1433 aa18.45■□□□□ 0.54
CAPN1-224ENST00000533129 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.45■□□□□ 0.54
CAPN1-224ENST00000533129 GAS2L3Q86XJ1 694 aa18.45■□□□□ 0.54
CAPN1-224ENST00000533129 AMOTL2Q9Y2J4 779 aa18.45■□□□□ 0.54
CAPN1-224ENST00000533129 XRN1Q8IZH2 1706 aaKnown RBP18.45■□□□□ 0.54
CAPN1-224ENST00000533129 ANKLE2Q86XL3 938 aa18.44■□□□□ 0.54
CAPN1-224ENST00000533129 PKNOX2Q96KN3 472 aa18.44■□□□□ 0.54
CAPN1-224ENST00000533129 KIF16BQ96L93 1317 aa18.44■□□□□ 0.54
CAPN1-224ENST00000533129 TPM2P07951 284 aa18.44■□□□□ 0.54
CAPN1-224ENST00000533129 TMEM57Q8N5G2 664 aa18.44■□□□□ 0.54
CAPN1-224ENST00000533129 BMP2KLQ5H9B9 411 aa18.43■□□□□ 0.54
CAPN1-224ENST00000533129 NUDT16Q96DE0 195 aaKnown RBP18.43■□□□□ 0.54
CAPN1-224ENST00000533129 NOB1Q9ULX3 412 aaKnown RBP18.43■□□□□ 0.54
CAPN1-224ENST00000533129 CDC42BPGQ6DT37 1551 aa18.43■□□□□ 0.54
CAPN1-224ENST00000533129 CPSF1Q10570 1443 aaKnown RBP18.43■□□□□ 0.54
CAPN1-224ENST00000533129 KIF20BQ96Q89 1820 aa18.43■□□□□ 0.54
CAPN1-224ENST00000533129 PLEKHF1Q96S99 279 aa18.42■□□□□ 0.54
CAPN1-224ENST00000533129 CCDC61Q9Y6R9 512 aa18.42■□□□□ 0.54
CAPN1-224ENST00000533129 IPO8O15397 1037 aaKnown RBP18.42■□□□□ 0.54
CAPN1-224ENST00000533129 TMPOP42166 694 aaKnown RBP18.42■□□□□ 0.54
CAPN1-224ENST00000533129 IBTKQ9P2D0 1353 aaPredicted RBP18.42■□□□□ 0.54
CAPN1-224ENST00000533129 CHD1LQ86WJ1 897 aa18.42■□□□□ 0.54
CAPN1-224ENST00000533129 TRIM35Q9UPQ4 493 aa18.42■□□□□ 0.54
CAPN1-224ENST00000533129 COL3A1P02461 1466 aaPredicted RBP18.41■□□□□ 0.54
CAPN1-224ENST00000533129 FYB1O15117 783 aa18.41■□□□□ 0.54
CAPN1-224ENST00000533129 CCDC173Q0VFZ6 552 aa18.41■□□□□ 0.54
CAPN1-224ENST00000533129 KIF2CQ99661 725 aa18.41■□□□□ 0.54
CAPN1-224ENST00000533129 EDC4Q6P2E9 1401 aaKnown RBP18.4■□□□□ 0.54
CAPN1-224ENST00000533129 CLEC17AQ6ZS10 378 aa18.4■□□□□ 0.54
CAPN1-224ENST00000533129 VSIG10Q8N0Z9 540 aa18.4■□□□□ 0.54
CAPN1-224ENST00000533129 PPP1R9BQ96SB3 815 aa18.4■□□□□ 0.54
CAPN1-224ENST00000533129 LNPKQ9C0E8 428 aa18.4■□□□□ 0.54
CAPN1-224ENST00000533129 TOPAZ1Q8N9V7 1692 aa18.39■□□□□ 0.53
CAPN1-224ENST00000533129 GGNBP2Q9H3C7 697 aa18.39■□□□□ 0.53
CAPN1-224ENST00000533129 K7ELQ4 463 aaPredicted RBP18.39■□□□□ 0.53
CAPN1-224ENST00000533129 ALDH1L2Q3SY69 923 aa18.38■□□□□ 0.53
CAPN1-224ENST00000533129 MON2Q7Z3U7 1717 aa18.38■□□□□ 0.53
CAPN1-224ENST00000533129 ITSN1Q15811 1721 aa18.38■□□□□ 0.53
CAPN1-224ENST00000533129 PRR36Q9H6K5 1346 aa18.38■□□□□ 0.53
CAPN1-224ENST00000533129 AKAP12Q02952 1782 aa18.37■□□□□ 0.53
CAPN1-224ENST00000533129 GOLGA6L22H0YM25 854 aa18.37■□□□□ 0.53
CAPN1-224ENST00000533129 ZMYND15Q9H091 742 aa18.36■□□□□ 0.53
CAPN1-224ENST00000533129 GCC1Q96CN9 775 aa18.36■□□□□ 0.53
CAPN1-224ENST00000533129 NASPP49321 788 aaPredicted RBP18.35■□□□□ 0.53
CAPN1-224ENST00000533129 KLHL40Q2TBA0 621 aa18.35■□□□□ 0.53
CAPN1-224ENST00000533129 CD2BP2O95400 341 aaKnown RBP18.35■□□□□ 0.53
CAPN1-224ENST00000533129 U2SURPO15042 1029 aaKnown RBP18.34■□□□□ 0.53
CAPN1-224ENST00000533129 BRPF1P55201 1214 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-224ENST00000533129 ZSCAN30Q86W11 494 aa18.34■□□□□ 0.53
CAPN1-224ENST00000533129 CHMP4BQ9H444 224 aaKnown RBP18.34■□□□□ 0.53
CAPN1-224ENST00000533129 NPHP4O75161 1426 aaPredicted RBP18.34■□□□□ 0.53
CAPN1-224ENST00000533129 KCNA6P17658 529 aa18.34■□□□□ 0.53
CAPN1-224ENST00000533129 ANP32BQ92688 251 aaKnown RBP18.34■□□□□ 0.53
CAPN1-224ENST00000533129 ZNF428Q96B54 188 aa18.34■□□□□ 0.53
CAPN1-224ENST00000533129 CHD2O14647 1828 aaKnown RBP18.34■□□□□ 0.53
CAPN1-224ENST00000533129 PLEKHG3A1L390 1219 aa18.33■□□□□ 0.53
CAPN1-224ENST00000533129 NCKAP5LQ9HCH0 1330 aa18.33■□□□□ 0.52
CAPN1-224ENST00000533129 TBC1D9Q6ZT07 1266 aa18.33■□□□□ 0.52
CAPN1-224ENST00000533129 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.33■□□□□ 0.52
CAPN1-224ENST00000533129 SSFA2P28290 1259 aa18.32■□□□□ 0.52
CAPN1-224ENST00000533129 PDCL3Q9H2J4 239 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms