RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 TULP4Q9NRJ4 1543 aa14.55□□□□□ -0.08
CHMP4A-206ENST00000533011 TRPM1Q7Z4N2 1603 aa14.55□□□□□ -0.08
CHMP4A-206ENST00000533011 AATKQ6ZMQ8 1374 aa14.54□□□□□ -0.08
CHMP4A-206ENST00000533011 CRB1P82279 1406 aa14.53□□□□□ -0.08
CHMP4A-206ENST00000533011 HSPA6P17066 643 aa14.53□□□□□ -0.08
CHMP4A-206ENST00000533011 SLC16A10Q8TF71 515 aa14.53□□□□□ -0.08
CHMP4A-206ENST00000533011 NLRP13Q86W25 1043 aa14.52□□□□□ -0.09
CHMP4A-206ENST00000533011 ABTB2Q8N961 1025 aa14.52□□□□□ -0.09
CHMP4A-206ENST00000533011 PEAK1Q9H792 1746 aa14.52□□□□□ -0.09
CHMP4A-206ENST00000533011 ROCK2O75116 1388 aaKnown RBP14.5□□□□□ -0.09
CHMP4A-206ENST00000533011 GCP02774 474 aa14.5□□□□□ -0.09
CHMP4A-206ENST00000533011 POLD1P28340 1107 aa14.5□□□□□ -0.09
CHMP4A-206ENST00000533011 NUTM2GQ5VZR2 741 aa14.5□□□□□ -0.09
CHMP4A-206ENST00000533011 NUDT16Q96DE0 195 aaKnown RBP14.5□□□□□ -0.09
CHMP4A-206ENST00000533011 PHRF1Q9P1Y6 1649 aaKnown RBP14.5□□□□□ -0.09
CHMP4A-206ENST00000533011 CENPJQ9HC77 1338 aaPredicted RBP14.49□□□□□ -0.09
CHMP4A-206ENST00000533011 SBF2Q86WG5 1849 aa14.49□□□□□ -0.09
CHMP4A-206ENST00000533011 COL5A2P05997 1499 aaPredicted RBP14.49□□□□□ -0.09
CHMP4A-206ENST00000533011 USP19O94966 1318 aa14.48□□□□□ -0.09
CHMP4A-206ENST00000533011 CLSPNQ9HAW4 1339 aa14.48□□□□□ -0.09
CHMP4A-206ENST00000533011 MARCH10Q8NA82 808 aaPredicted RBP14.48□□□□□ -0.09
CHMP4A-206ENST00000533011 CDK19Q9BWU1 502 aa14.48□□□□□ -0.09
CHMP4A-206ENST00000533011 LMO7Q8WWI1 1683 aa14.48□□□□□ -0.09
CHMP4A-206ENST00000533011 POLR3AO14802 1390 aaPredicted RBP14.47□□□□□ -0.09
CHMP4A-206ENST00000533011 TOM1L2Q6ZVM7 507 aa14.47□□□□□ -0.09
CHMP4A-206ENST00000533011 PTF1AQ7RTS3 328 aa14.47□□□□□ -0.09
CHMP4A-206ENST00000533011 GPBP1L1Q9HC44 474 aaPredicted RBP14.47□□□□□ -0.09
CHMP4A-206ENST00000533011 CCDC61Q9Y6R9 512 aa14.47□□□□□ -0.09
CHMP4A-206ENST00000533011 QRICH2Q9H0J4 1663 aa14.46□□□□□ -0.09
CHMP4A-206ENST00000533011 PLEKHG3A1L390 1219 aa14.46□□□□□ -0.09
CHMP4A-206ENST00000533011 EXOC5O00471 708 aa14.46□□□□□ -0.09
CHMP4A-206ENST00000533011 PELP1Q8IZL8 1130 aaKnown RBP14.46□□□□□ -0.09
CHMP4A-206ENST00000533011 ITSN1Q15811 1721 aa14.46□□□□□ -0.1
CHMP4A-206ENST00000533011 ACEP12821 1306 aa14.45□□□□□ -0.1
CHMP4A-206ENST00000533011 BRD4O60885 1362 aaPredicted RBP14.45□□□□□ -0.1
CHMP4A-206ENST00000533011 CARD11Q9BXL7 1154 aa14.44□□□□□ -0.1
CHMP4A-206ENST00000533011 SHANK3Q9BYB0 1731 aa14.44□□□□□ -0.1
CHMP4A-206ENST00000533011 TIMELESSQ9UNS1 1208 aa14.43□□□□□ -0.1
CHMP4A-206ENST00000533011 SRPK2P78362 688 aaKnown RBP14.42□□□□□ -0.1
CHMP4A-206ENST00000533011 WDR17Q8IZU2 1322 aa14.41□□□□□ -0.1
CHMP4A-206ENST00000533011 LRRC37A3O60309 1634 aa14.41□□□□□ -0.1
CHMP4A-206ENST00000533011 KLHL34Q8N239 644 aa14.41□□□□□ -0.1
CHMP4A-206ENST00000533011 CARD10Q9BWT7 1032 aa14.41□□□□□ -0.1
CHMP4A-206ENST00000533011 TOPAZ1Q8N9V7 1692 aa14.41□□□□□ -0.1
CHMP4A-206ENST00000533011 ATP10DQ9P241 1426 aa14.41□□□□□ -0.1
CHMP4A-206ENST00000533011 EVC2Q86UK5 1308 aa14.41□□□□□ -0.1
CHMP4A-206ENST00000533011 GOLGB1Q14789 3259 aaKnown RBP14.4□□□□□ -0.1
CHMP4A-206ENST00000533011 APLP1P51693 650 aa14.4□□□□□ -0.1
CHMP4A-206ENST00000533011 CCER1Q8TC90 406 aaPredicted RBP14.4□□□□□ -0.1
CHMP4A-206ENST00000533011 CABP2Q9NPB3 220 aa14.4□□□□□ -0.1
CHMP4A-206ENST00000533011 SLC27A3Q5K4L6 730 aa14.39□□□□□ -0.11
CHMP4A-206ENST00000533011 SBNO2Q9Y2G9 1366 aa14.37□□□□□ -0.11
CHMP4A-206ENST00000533011 PPIP5K1Q6PFW1 1433 aa14.37□□□□□ -0.11
CHMP4A-206ENST00000533011 ZBTB7CA1YPR0 619 aa14.36□□□□□ -0.11
CHMP4A-206ENST00000533011 YBX3P16989 372 aaKnown RBP eCLIP14.36□□□□□ -0.11
CHMP4A-206ENST00000533011 NLRP6P59044 892 aa14.36□□□□□ -0.11
CHMP4A-206ENST00000533011 NLGN2Q8NFZ4 835 aa14.36□□□□□ -0.11
CHMP4A-206ENST00000533011 AKT1S1Q96B36 256 aa14.36□□□□□ -0.11
CHMP4A-206ENST00000533011 AKAP12Q02952 1782 aa14.36□□□□□ -0.11
CHMP4A-206ENST00000533011 CCDC7Q96M83 1385 aa14.35□□□□□ -0.11
CHMP4A-206ENST00000533011 HMGB2P26583 209 aaKnown RBP14.35□□□□□ -0.11
CHMP4A-206ENST00000533011 ZNF827Q17R98 1081 aa14.35□□□□□ -0.11
CHMP4A-206ENST00000533011 CSB-PGBD3P0DP91 1061 aa14.34□□□□□ -0.11
CHMP4A-206ENST00000533011 KCNH5Q8NCM2 988 aa14.34□□□□□ -0.11
CHMP4A-206ENST00000533011 TFCP2L1Q9NZI6 479 aa14.34□□□□□ -0.11
CHMP4A-206ENST00000533011 CABP1Q9NZU7 370 aa14.34□□□□□ -0.11
CHMP4A-206ENST00000533011 DNAJC5GQ8N7S2 189 aa14.33□□□□□ -0.12
CHMP4A-206ENST00000533011 AXIN2Q9Y2T1 843 aa14.33□□□□□ -0.12
CHMP4A-206ENST00000533011 PAPPAQ13219 1627 aa14.33□□□□□ -0.12
CHMP4A-206ENST00000533011 USP6P35125 1406 aa14.32□□□□□ -0.12
CHMP4A-206ENST00000533011 COL24A1Q17RW2 1714 aa14.32□□□□□ -0.12
CHMP4A-206ENST00000533011 SLC24A1O60721 1099 aa14.32□□□□□ -0.12
CHMP4A-206ENST00000533011 LRRC4BQ9NT99 713 aa14.32□□□□□ -0.12
CHMP4A-206ENST00000533011 CD2APQ9Y5K6 639 aa14.32□□□□□ -0.12
CHMP4A-206ENST00000533011 ADCY9O60503 1353 aa14.32□□□□□ -0.12
CHMP4A-206ENST00000533011 ST20-MTHFSA0A0A6YYL1 179 aa14.31□□□□□ -0.12
CHMP4A-206ENST00000533011 PRELPP51888 382 aa14.31□□□□□ -0.12
CHMP4A-206ENST00000533011 ARHGEF25Q86VW2 580 aa14.31□□□□□ -0.12
CHMP4A-206ENST00000533011 PNPLA7Q6ZV29 1317 aa14.31□□□□□ -0.12
CHMP4A-206ENST00000533011 NHSQ6T4R5 1651 aa14.3□□□□□ -0.12
CHMP4A-206ENST00000533011 ACSBG1Q96GR2 724 aa14.3□□□□□ -0.12
CHMP4A-206ENST00000533011 TNS2Q63HR2 1409 aa14.3□□□□□ -0.12
CHMP4A-206ENST00000533011 TOMM70O94826 608 aa14.29□□□□□ -0.12
CHMP4A-206ENST00000533011 PUS7Q96PZ0 661 aaKnown RBP14.29□□□□□ -0.12
CHMP4A-206ENST00000533011 TESK2Q96S53 571 aa14.29□□□□□ -0.12
CHMP4A-206ENST00000533011 ZNF692Q9BU19 519 aaPredicted RBP14.29□□□□□ -0.12
CHMP4A-206ENST00000533011 SLIT3O75094 1523 aa14.29□□□□□ -0.12
CHMP4A-206ENST00000533011 QSER1Q2KHR3 1735 aa14.29□□□□□ -0.12
CHMP4A-206ENST00000533011 WNK3Q9BYP7 1800 aa14.29□□□□□ -0.12
CHMP4A-206ENST00000533011 KIF3CO14782 793 aa14.28□□□□□ -0.12
CHMP4A-206ENST00000533011 ZNF526Q8TF50 670 aaPredicted RBP14.28□□□□□ -0.12
CHMP4A-206ENST00000533011 USP47Q96K76 1375 aa14.28□□□□□ -0.12
CHMP4A-206ENST00000533011 CPSF1Q10570 1443 aaKnown RBP14.27□□□□□ -0.12
CHMP4A-206ENST00000533011 COL18A1P39060 1754 aa14.27□□□□□ -0.13
CHMP4A-206ENST00000533011 COL13A1Q5TAT6 717 aaPredicted RBP14.26□□□□□ -0.13
CHMP4A-206ENST00000533011 TNS4Q8IZW8 715 aa14.26□□□□□ -0.13
CHMP4A-206ENST00000533011 IL2RBP14784 551 aa14.25□□□□□ -0.13
CHMP4A-206ENST00000533011 JMYQ8N9B5 988 aa14.25□□□□□ -0.13
CHMP4A-206ENST00000533011 ABCC6O95255 1503 aa14.25□□□□□ -0.13
CHMP4A-206ENST00000533011 KTN1Q86UP2 1357 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms