RNA–Protein interactions for RNA: ENST00000532367.1

SMPD1-207, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 409 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-207ENST00000532367 ARHGEF25Q86VW2 580 aa15.09■□□□□ 0.01
SMPD1-207ENST00000532367 CCDC146Q8IYE0 955 aa15.09■□□□□ 0.01
SMPD1-207ENST00000532367 CERKQ8TCT0 537 aa15.09■□□□□ 0.01
SMPD1-207ENST00000532367 IP6K1Q92551 441 aa15.09■□□□□ 0.01
SMPD1-207ENST00000532367 MED1Q15648 1581 aaPredicted RBP15.09■□□□□ 0.01
SMPD1-207ENST00000532367 UBAP1LF5GYI3 381 aa15.08■□□□□ 0
SMPD1-207ENST00000532367 LRRC59Q96AG4 307 aaKnown RBP15.08■□□□□ 0
SMPD1-207ENST00000532367 PHRF1Q9P1Y6 1649 aaKnown RBP15.07■□□□□ 0
SMPD1-207ENST00000532367 FCHSD2O94868 740 aa15.07■□□□□ 0
SMPD1-207ENST00000532367 NGEFQ8N5V2 710 aa15.07■□□□□ 0
SMPD1-207ENST00000532367 ZBTB7CA1YPR0 619 aa15.06■□□□□ 0
SMPD1-207ENST00000532367 PIP4K2BP78356 416 aa15.06■□□□□ 0
SMPD1-207ENST00000532367 CABLES1Q8TDN4 633 aa15.06■□□□□ 0
SMPD1-207ENST00000532367 CRYBG1Q9Y4K1 1723 aa15.06■□□□□ 0
SMPD1-207ENST00000532367 APAF1O14727 1248 aa15.05■□□□□ -0
SMPD1-207ENST00000532367 MAPK8IP3Q9UPT6 1336 aa15.04■□□□□ -0
SMPD1-207ENST00000532367 NEFMP07197 916 aa15.04■□□□□ -0
SMPD1-207ENST00000532367 ZC3H6P61129 1189 aaKnown RBP15.04■□□□□ -0
SMPD1-207ENST00000532367 RSPH6AQ9H0K4 717 aa15.04■□□□□ -0
SMPD1-207ENST00000532367 SALL2Q9Y467 1007 aaPredicted RBP15.04■□□□□ -0
SMPD1-207ENST00000532367 PHLPP1O60346 1717 aa15.03■□□□□ -0
SMPD1-207ENST00000532367 SENP3-EIF4A1A0A087X0R7 540 aa15.03■□□□□ -0
SMPD1-207ENST00000532367 HAP1P54257 671 aaPredicted RBP15.03■□□□□ -0
SMPD1-207ENST00000532367 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
SMPD1-207ENST00000532367 PLEKHF1Q96S99 279 aa15.03■□□□□ -0
SMPD1-207ENST00000532367 CPDO75976 1380 aa15.02■□□□□ -0
SMPD1-207ENST00000532367 HMOX1P09601 288 aa15.02■□□□□ -0
SMPD1-207ENST00000532367 PDE3BQ13370 1112 aa15.02■□□□□ -0
SMPD1-207ENST00000532367 TCP11L2Q8N4U5 519 aa15.02■□□□□ -0
SMPD1-207ENST00000532367 LTV1Q96GA3 475 aaPredicted RBP15.02■□□□□ -0
SMPD1-207ENST00000532367 RGPD1P0DJD0 1748 aa15.02□□□□□ -0.01
SMPD1-207ENST00000532367 PRKAR2BP31323 418 aa15.01□□□□□ -0.01
SMPD1-207ENST00000532367 SULT6B1Q6IMI4 303 aa15.01□□□□□ -0.01
SMPD1-207ENST00000532367 EYA1Q99502 592 aa15.01□□□□□ -0.01
SMPD1-207ENST00000532367 ABCC6O95255 1503 aa15.01□□□□□ -0.01
SMPD1-207ENST00000532367 IGSF1Q8N6C5 1336 aa15□□□□□ -0.01
SMPD1-207ENST00000532367 ABCA3Q99758 1704 aa15□□□□□ -0.01
SMPD1-207ENST00000532367 COL16A1Q07092 1604 aaPredicted RBP14.99□□□□□ -0.01
SMPD1-207ENST00000532367 KIAA0232Q92628 1395 aa14.99□□□□□ -0.01
SMPD1-207ENST00000532367 COL18A1P39060 1754 aa14.99□□□□□ -0.01
SMPD1-207ENST00000532367 COL22A1Q8NFW1 1626 aaPredicted RBP14.99□□□□□ -0.01
SMPD1-207ENST00000532367 RGPD5Q99666 1765 aa14.98□□□□□ -0.01
SMPD1-207ENST00000532367 TMPOP42166 694 aaKnown RBP14.98□□□□□ -0.01
SMPD1-207ENST00000532367 CCDC27Q2M243 656 aa14.98□□□□□ -0.01
SMPD1-207ENST00000532367 AEBP1Q8IUX7 1158 aa14.98□□□□□ -0.01
SMPD1-207ENST00000532367 ANKRD24Q8TF21 1146 aa14.98□□□□□ -0.01
SMPD1-207ENST00000532367 AXIN2Q9Y2T1 843 aa14.98□□□□□ -0.01
SMPD1-207ENST00000532367 KDRP35968 1356 aa14.98□□□□□ -0.01
SMPD1-207ENST00000532367 NEUROD2Q15784 382 aa14.97□□□□□ -0.01
SMPD1-207ENST00000532367 PRDM11Q9NQV5 511 aa14.97□□□□□ -0.01
SMPD1-207ENST00000532367 RRP7AQ9Y3A4 280 aaKnown RBP14.97□□□□□ -0.01
SMPD1-207ENST00000532367 ZNF521Q96K83 1311 aa14.96□□□□□ -0.01
SMPD1-207ENST00000532367 CHRNA2Q15822 529 aa14.96□□□□□ -0.01
SMPD1-207ENST00000532367 NFE2L2Q16236 605 aa14.96□□□□□ -0.01
SMPD1-207ENST00000532367 PHACTR3Q96KR7 559 aa14.96□□□□□ -0.01
SMPD1-207ENST00000532367 RIPK4P57078 832 aa14.95□□□□□ -0.02
SMPD1-207ENST00000532367 GOLGA2Q08379 1002 aa14.95□□□□□ -0.02
SMPD1-207ENST00000532367 NBPF6Q5VWK0 638 aa14.95□□□□□ -0.02
SMPD1-207ENST00000532367 WWC1Q8IX03 1113 aa14.95□□□□□ -0.02
SMPD1-207ENST00000532367 NBPF4Q96M43 638 aa14.95□□□□□ -0.02
SMPD1-207ENST00000532367 ERBB3P21860 1342 aa14.94□□□□□ -0.02
SMPD1-207ENST00000532367 RGPD2P0DJD1 1756 aa14.94□□□□□ -0.02
SMPD1-207ENST00000532367 WDR63Q8IWG1 891 aa14.94□□□□□ -0.02
SMPD1-207ENST00000532367 CSB-PGBD3P0DP91 1061 aa14.93□□□□□ -0.02
SMPD1-207ENST00000532367 FAM208AQ9UK61 1670 aaKnown RBP14.93□□□□□ -0.02
SMPD1-207ENST00000532367 LMOD3Q0VAK6 560 aa14.92□□□□□ -0.02
SMPD1-207ENST00000532367 USHBP1Q8N6Y0 703 aa14.92□□□□□ -0.02
SMPD1-207ENST00000532367 LMO7Q8WWI1 1683 aa14.92□□□□□ -0.02
SMPD1-207ENST00000532367 FAM83GA6ND36 823 aa14.91□□□□□ -0.02
SMPD1-207ENST00000532367 CDCA7LQ96GN5 454 aa14.91□□□□□ -0.02
SMPD1-207ENST00000532367 NLRP2Q9NX02 1062 aa14.91□□□□□ -0.02
SMPD1-207ENST00000532367 TRIM35Q9UPQ4 493 aa14.91□□□□□ -0.02
SMPD1-207ENST00000532367 NCAPD2Q15021 1401 aa14.91□□□□□ -0.02
SMPD1-207ENST00000532367 CAMTA1Q9Y6Y1 1673 aa14.9□□□□□ -0.02
SMPD1-207ENST00000532367 JCADQ9P266 1359 aa14.9□□□□□ -0.02
SMPD1-207ENST00000532367 E9PSI1 815 aa14.9□□□□□ -0.02
SMPD1-207ENST00000532367 SLFN5Q08AF3 891 aa14.9□□□□□ -0.02
SMPD1-207ENST00000532367 GAS2L2Q8NHY3 880 aa14.9□□□□□ -0.02
SMPD1-207ENST00000532367 COL14A1Q05707 1796 aaKnown RBP14.9□□□□□ -0.02
SMPD1-207ENST00000532367 DLG5Q8TDM6 1919 aa14.9□□□□□ -0.02
SMPD1-207ENST00000532367 EVA1CP58658 441 aa14.89□□□□□ -0.03
SMPD1-207ENST00000532367 WDR17Q8IZU2 1322 aa14.89□□□□□ -0.03
SMPD1-207ENST00000532367 CALD1Q05682 793 aaKnown RBP14.88□□□□□ -0.03
SMPD1-207ENST00000532367 MTHFSDQ2M296 383 aaKnown RBP14.88□□□□□ -0.03
SMPD1-207ENST00000532367 TRMT2AQ8IZ69 625 aaKnown RBP14.88□□□□□ -0.03
SMPD1-207ENST00000532367 IL16Q14005 1332 aa14.88□□□□□ -0.03
SMPD1-207ENST00000532367 COL5A2P05997 1499 aaPredicted RBP14.88□□□□□ -0.03
SMPD1-207ENST00000532367 AMOTQ4VCS5 1084 aa14.87□□□□□ -0.03
SMPD1-207ENST00000532367 PLEKHO1Q53GL0 409 aaPredicted RBP14.87□□□□□ -0.03
SMPD1-207ENST00000532367 TOM1L2Q6ZVM7 507 aa14.87□□□□□ -0.03
SMPD1-207ENST00000532367 BTG4Q9NY30 223 aa14.87□□□□□ -0.03
SMPD1-207ENST00000532367 NUTM2BA6NNL0 878 aaPredicted RBP14.86□□□□□ -0.03
SMPD1-207ENST00000532367 NUTM2EB1AL46 878 aaPredicted RBP14.86□□□□□ -0.03
SMPD1-207ENST00000532367 HTATSF1O43719 755 aaKnown RBP14.86□□□□□ -0.03
SMPD1-207ENST00000532367 ADAMTS2O95450 1211 aa14.86□□□□□ -0.03
SMPD1-207ENST00000532367 DUSP27Q5VZP5 1158 aa14.86□□□□□ -0.03
SMPD1-207ENST00000532367 NUTM2AQ8IVF1 878 aaPredicted RBP14.86□□□□□ -0.03
SMPD1-207ENST00000532367 RAPGEF4Q8WZA2 1011 aa14.86□□□□□ -0.03
SMPD1-207ENST00000532367 TATP17735 454 aaPredicted RBP14.85□□□□□ -0.03
SMPD1-207ENST00000532367 HSPA1LP34931 641 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms