RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 DZIP3Q86Y13 1208 aaKnown RBP13.67□□□□□ -0.22
KNL1-209ENST00000532347 PPP1R12CQ9BZL4 782 aa13.67□□□□□ -0.22
KNL1-209ENST00000532347 CEP126Q9P2H0 1117 aa13.67□□□□□ -0.22
KNL1-209ENST00000532347 SLC10A4Q96EP9 437 aa13.65□□□□□ -0.22
KNL1-209ENST00000532347 CADPSQ9ULU8 1353 aa13.65□□□□□ -0.22
KNL1-209ENST00000532347 KIF21AQ7Z4S6 1674 aa13.65□□□□□ -0.22
KNL1-209ENST00000532347 WDR62O43379 1518 aa13.64□□□□□ -0.23
KNL1-209ENST00000532347 PALM3A6NDB9 673 aaPredicted RBP13.64□□□□□ -0.23
KNL1-209ENST00000532347 PIK3CDO00329 1044 aa13.64□□□□□ -0.23
KNL1-209ENST00000532347 VARSP26640 1264 aaKnown RBP13.64□□□□□ -0.23
KNL1-209ENST00000532347 TRMT44Q8IYL2 757 aaKnown RBP13.64□□□□□ -0.23
KNL1-209ENST00000532347 TFIP11Q9UBB9 837 aaKnown RBP13.64□□□□□ -0.23
KNL1-209ENST00000532347 MRC2Q9UBG0 1479 aa13.63□□□□□ -0.23
KNL1-209ENST00000532347 CFAP70Q5T0N1 1121 aa13.63□□□□□ -0.23
KNL1-209ENST00000532347 RC3H1Q5TC82 1133 aaKnown RBP13.63□□□□□ -0.23
KNL1-209ENST00000532347 TBC1D9Q6ZT07 1266 aa13.63□□□□□ -0.23
KNL1-209ENST00000532347 EHBP1Q8NDI1 1231 aa13.62□□□□□ -0.23
KNL1-209ENST00000532347 ARXQ96QS3 562 aa13.62□□□□□ -0.23
KNL1-209ENST00000532347 SLFNL1Q499Z3 407 aa13.61□□□□□ -0.23
KNL1-209ENST00000532347 FAM174AQ8TBP5 190 aa13.61□□□□□ -0.23
KNL1-209ENST00000532347 SPRYD7Q5W111 196 aa13.6□□□□□ -0.23
KNL1-209ENST00000532347 PHTF2Q8N3S3 785 aa13.6□□□□□ -0.23
KNL1-209ENST00000532347 ATP9BO43861 1147 aa13.59□□□□□ -0.23
KNL1-209ENST00000532347 NFATC2IPQ8NCF5 419 aa13.59□□□□□ -0.23
KNL1-209ENST00000532347 MAFBQ9Y5Q3 323 aaPredicted RBP13.59□□□□□ -0.23
KNL1-209ENST00000532347 MROH2BQ7Z745 1585 aa13.58□□□□□ -0.23
KNL1-209ENST00000532347 GIGYF1O75420 1035 aaPredicted RBP13.58□□□□□ -0.24
KNL1-209ENST00000532347 RFX1P22670 979 aa13.58□□□□□ -0.24
KNL1-209ENST00000532347 LMOD1P29536 600 aaPredicted RBP13.58□□□□□ -0.24
KNL1-209ENST00000532347 RNF135Q8IUD6 432 aa13.58□□□□□ -0.24
KNL1-209ENST00000532347 SKIP12755 728 aa13.57□□□□□ -0.24
KNL1-209ENST00000532347 NBPF20Q3BBV1 942 aa13.57□□□□□ -0.24
KNL1-209ENST00000532347 PRKD2Q9BZL6 878 aa13.57□□□□□ -0.24
KNL1-209ENST00000532347 CDV3Q9UKY7 258 aaKnown RBP13.57□□□□□ -0.24
KNL1-209ENST00000532347 WNT7AO00755 349 aa13.56□□□□□ -0.24
KNL1-209ENST00000532347 MAP4K5Q9Y4K4 846 aa13.55□□□□□ -0.24
KNL1-209ENST00000532347 V9GY48 417 aaPredicted RBP13.55□□□□□ -0.24
KNL1-209ENST00000532347 ESPNB1AK53 854 aa13.54□□□□□ -0.24
KNL1-209ENST00000532347 SIAH2O43255 324 aa13.54□□□□□ -0.24
KNL1-209ENST00000532347 ZNF697Q5TEC3 545 aa13.54□□□□□ -0.24
KNL1-209ENST00000532347 VASH1Q7L8A9 365 aaPredicted RBP13.54□□□□□ -0.24
KNL1-209ENST00000532347 ZNF598Q86UK7 904 aaKnown RBP13.54□□□□□ -0.24
KNL1-209ENST00000532347 HOMEZQ8IX15 550 aa13.54□□□□□ -0.24
KNL1-209ENST00000532347 MRGPRX2Q96LB1 330 aa13.54□□□□□ -0.24
KNL1-209ENST00000532347 KCTD15Q96SI1 283 aaPredicted RBP13.54□□□□□ -0.24
KNL1-209ENST00000532347 CHIC2Q9UKJ5 165 aa13.54□□□□□ -0.24
KNL1-209ENST00000532347 TLL2Q9Y6L7 1015 aa13.54□□□□□ -0.24
KNL1-209ENST00000532347 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.53□□□□□ -0.24
KNL1-209ENST00000532347 USP17L5A8MUK1 530 aa13.53□□□□□ -0.24
KNL1-209ENST00000532347 ARID5BQ14865 1188 aa13.53□□□□□ -0.24
KNL1-209ENST00000532347 TSGA10IPQ3SY00 556 aa13.53□□□□□ -0.24
KNL1-209ENST00000532347 PLPP7Q8NBV4 271 aa13.53□□□□□ -0.24
KNL1-209ENST00000532347 CDK15Q96Q40 435 aa13.53□□□□□ -0.24
KNL1-209ENST00000532347 RNF20Q5VTR2 975 aa13.52□□□□□ -0.25
KNL1-209ENST00000532347 CEP164Q9UPV0 1460 aa13.52□□□□□ -0.25
KNL1-209ENST00000532347 USP17L3A6NCW0 530 aa13.51□□□□□ -0.25
KNL1-209ENST00000532347 USP17L4A6NCW7 530 aa13.51□□□□□ -0.25
KNL1-209ENST00000532347 SRPK2P78362 688 aaKnown RBP13.51□□□□□ -0.25
KNL1-209ENST00000532347 USP17L2Q6R6M4 530 aa13.51□□□□□ -0.25
KNL1-209ENST00000532347 USP17L1Q7RTZ2 530 aa13.51□□□□□ -0.25
KNL1-209ENST00000532347 DEPDC4Q8N2C3 294 aa13.51□□□□□ -0.25
KNL1-209ENST00000532347 PBXIP1Q96AQ6 731 aa13.51□□□□□ -0.25
KNL1-209ENST00000532347 CCDC85AQ96PX6 553 aaPredicted RBP13.51□□□□□ -0.25
KNL1-209ENST00000532347 PPP1R15AO75807 674 aaPredicted RBP13.5□□□□□ -0.25
KNL1-209ENST00000532347 PLEKHM2Q8IWE5 1019 aa13.5□□□□□ -0.25
KNL1-209ENST00000532347 SEPT12Q8IYM1 358 aa13.5□□□□□ -0.25
KNL1-209ENST00000532347 MPNDQ8N594 471 aa13.5□□□□□ -0.25
KNL1-209ENST00000532347 PKD2L1Q9P0L9 805 aa13.5□□□□□ -0.25
KNL1-209ENST00000532347 RAB15P59190 212 aa13.49□□□□□ -0.25
KNL1-209ENST00000532347 FOXC1Q12948 553 aa13.49□□□□□ -0.25
KNL1-209ENST00000532347 MAP7D1Q3KQU3 841 aa13.49□□□□□ -0.25
KNL1-209ENST00000532347 GRM5P41594 1212 aa13.48□□□□□ -0.25
KNL1-209ENST00000532347 INTS6LQ5JSJ4 861 aaKnown RBP13.48□□□□□ -0.25
KNL1-209ENST00000532347 TRAF7Q6Q0C0 670 aa13.48□□□□□ -0.25
KNL1-209ENST00000532347 DOLKQ9UPQ8 538 aa13.48□□□□□ -0.25
KNL1-209ENST00000532347 NCOA4Q13772 614 aa13.47□□□□□ -0.25
KNL1-209ENST00000532347 CFTRP13569 1480 aa13.47□□□□□ -0.25
KNL1-209ENST00000532347 FSHRP23945 695 aa13.46□□□□□ -0.25
KNL1-209ENST00000532347 CDCA8Q53HL2 280 aa13.46□□□□□ -0.25
KNL1-209ENST00000532347 FANCD2Q9BXW9 1451 aa13.45□□□□□ -0.26
KNL1-209ENST00000532347 ADH1CP00326 375 aa13.45□□□□□ -0.26
KNL1-209ENST00000532347 KANK4Q5T7N3 995 aaPredicted RBP13.45□□□□□ -0.26
KNL1-209ENST00000532347 CDCA7Q9BWT1 371 aaPredicted RBP13.45□□□□□ -0.26
KNL1-209ENST00000532347 VRTNQ9H8Y1 702 aa13.45□□□□□ -0.26
KNL1-209ENST00000532347 PCDHB11Q9Y5F2 797 aa13.45□□□□□ -0.26
KNL1-209ENST00000532347 LZTS3O60299 673 aaPredicted RBP13.44□□□□□ -0.26
KNL1-209ENST00000532347 CCDC125Q86Z20 511 aa13.44□□□□□ -0.26
KNL1-209ENST00000532347 ERVH48-1M5A8F1 160 aa13.43□□□□□ -0.26
KNL1-209ENST00000532347 EML3Q32P44 896 aa13.43□□□□□ -0.26
KNL1-209ENST00000532347 OXLD1Q5BKU9 147 aa13.43□□□□□ -0.26
KNL1-209ENST00000532347 ACIN1Q9UKV3 1341 aaKnown RBP13.42□□□□□ -0.26
KNL1-209ENST00000532347 GDF9O60383 454 aa13.42□□□□□ -0.26
KNL1-209ENST00000532347 ALDH1A1P00352 501 aa13.42□□□□□ -0.26
KNL1-209ENST00000532347 MKRN1Q9UHC7 482 aaKnown RBP13.42□□□□□ -0.26
KNL1-209ENST00000532347 NR5A1Q13285 461 aa13.41□□□□□ -0.26
KNL1-209ENST00000532347 SNIP1Q8TAD8 396 aaKnown RBP13.4□□□□□ -0.26
KNL1-209ENST00000532347 TNFRSF10AO00220 468 aa13.39□□□□□ -0.27
KNL1-209ENST00000532347 NR3C2P08235 984 aa13.39□□□□□ -0.27
KNL1-209ENST00000532347 CCDC116Q8IYX3 515 aa13.39□□□□□ -0.27
KNL1-209ENST00000532347 ATG7O95352 703 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms