RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 FHDC1Q9C0D6 1143 aaPredicted RBP11.47□□□□□ -0.57
NXF1-212ENST00000531872 ATF5Q9Y2D1 282 aaPredicted RBP11.47□□□□□ -0.57
NXF1-212ENST00000531872 SENP3-EIF4A1A0A087X0R7 540 aa11.46□□□□□ -0.57
NXF1-212ENST00000531872 SLC15A2Q16348 729 aa11.46□□□□□ -0.57
NXF1-212ENST00000531872 CHD4Q14839 1912 aa11.46□□□□□ -0.58
NXF1-212ENST00000531872 SLIT3O75094 1523 aa11.45□□□□□ -0.58
NXF1-212ENST00000531872 TXNRD1Q16881 649 aa11.45□□□□□ -0.58
NXF1-212ENST00000531872 TOM1L2Q6ZVM7 507 aa11.45□□□□□ -0.58
NXF1-212ENST00000531872 CDCA7Q9BWT1 371 aaPredicted RBP11.45□□□□□ -0.58
NXF1-212ENST00000531872 MTFR1LQ9H019 292 aa11.45□□□□□ -0.58
NXF1-212ENST00000531872 STK32BQ9NY57 414 aa11.45□□□□□ -0.58
NXF1-212ENST00000531872 COL18A1P39060 1754 aa11.45□□□□□ -0.58
NXF1-212ENST00000531872 PPIP5K1Q6PFW1 1433 aa11.44□□□□□ -0.58
NXF1-212ENST00000531872 WNK3Q9BYP7 1800 aa11.44□□□□□ -0.58
NXF1-212ENST00000531872 WDR17Q8IZU2 1322 aa11.44□□□□□ -0.58
NXF1-212ENST00000531872 MAP3K5Q99683 1374 aa11.43□□□□□ -0.58
NXF1-212ENST00000531872 NLRP6P59044 892 aa11.43□□□□□ -0.58
NXF1-212ENST00000531872 AXIN2Q9Y2T1 843 aa11.43□□□□□ -0.58
NXF1-212ENST00000531872 RAB3GAP2Q9H2M9 1393 aa11.42□□□□□ -0.58
NXF1-212ENST00000531872 GOLGB1Q14789 3259 aaKnown RBP11.42□□□□□ -0.58
NXF1-212ENST00000531872 AKAP12Q02952 1782 aa11.42□□□□□ -0.58
NXF1-212ENST00000531872 IFFO2Q5TF58 517 aa11.42□□□□□ -0.58
NXF1-212ENST00000531872 USP6P35125 1406 aa11.42□□□□□ -0.58
NXF1-212ENST00000531872 ZBTB7CA1YPR0 619 aa11.41□□□□□ -0.58
NXF1-212ENST00000531872 SRPK2P78362 688 aaKnown RBP11.41□□□□□ -0.58
NXF1-212ENST00000531872 ARXQ96QS3 562 aa11.41□□□□□ -0.58
NXF1-212ENST00000531872 CARD10Q9BWT7 1032 aa11.41□□□□□ -0.58
NXF1-212ENST00000531872 KIAA1210Q9ULL0 1709 aa11.4□□□□□ -0.58
NXF1-212ENST00000531872 CEP350Q5VT06 3117 aa11.4□□□□□ -0.58
NXF1-212ENST00000531872 ARHGEF25Q86VW2 580 aa11.4□□□□□ -0.58
NXF1-212ENST00000531872 CABP2Q9NPB3 220 aa11.4□□□□□ -0.58
NXF1-212ENST00000531872 CPSF1Q10570 1443 aaKnown RBP11.4□□□□□ -0.58
NXF1-212ENST00000531872 PIK3C2AO00443 1686 aa11.4□□□□□ -0.59
NXF1-212ENST00000531872 PAPPAQ13219 1627 aa11.39□□□□□ -0.59
NXF1-212ENST00000531872 EXOC5O00471 708 aa11.39□□□□□ -0.59
NXF1-212ENST00000531872 CABP1Q9NZU7 370 aa11.39□□□□□ -0.59
NXF1-212ENST00000531872 NBPF1Q3BBV0 1214 aa11.38□□□□□ -0.59
NXF1-212ENST00000531872 NHSQ6T4R5 1651 aa11.38□□□□□ -0.59
NXF1-212ENST00000531872 CENPJQ9HC77 1338 aaPredicted RBP11.37□□□□□ -0.59
NXF1-212ENST00000531872 TNS2Q63HR2 1409 aa11.37□□□□□ -0.59
NXF1-212ENST00000531872 TRPM1Q7Z4N2 1603 aa11.37□□□□□ -0.59
NXF1-212ENST00000531872 CCDC7Q96M83 1385 aa11.37□□□□□ -0.59
NXF1-212ENST00000531872 RGPD5Q99666 1765 aa11.36□□□□□ -0.59
NXF1-212ENST00000531872 GIGYF1O75420 1035 aaPredicted RBP11.36□□□□□ -0.59
NXF1-212ENST00000531872 GPR162Q16538 588 aa11.36□□□□□ -0.59
NXF1-212ENST00000531872 KCNH5Q8NCM2 988 aa11.36□□□□□ -0.59
NXF1-212ENST00000531872 CSB-PGBD3P0DP91 1061 aa11.35□□□□□ -0.59
NXF1-212ENST00000531872 ZNF827Q17R98 1081 aa11.35□□□□□ -0.59
NXF1-212ENST00000531872 QRICH2Q9H0J4 1663 aa11.35□□□□□ -0.59
NXF1-212ENST00000531872 ABCC6O95255 1503 aa11.35□□□□□ -0.59
NXF1-212ENST00000531872 TTC21BQ7Z4L5 1316 aa11.35□□□□□ -0.59
NXF1-212ENST00000531872 SLC16A10Q8TF71 515 aa11.34□□□□□ -0.59
NXF1-212ENST00000531872 ACSBG1Q96GR2 724 aa11.34□□□□□ -0.59
NXF1-212ENST00000531872 LRRC4BQ9NT99 713 aa11.34□□□□□ -0.59
NXF1-212ENST00000531872 COL24A1Q17RW2 1714 aa11.34□□□□□ -0.59
NXF1-212ENST00000531872 NFAT5O94916 1531 aa11.34□□□□□ -0.59
NXF1-212ENST00000531872 SHANK3Q9BYB0 1731 aa11.33□□□□□ -0.6
NXF1-212ENST00000531872 AKT1S1Q96B36 256 aa11.33□□□□□ -0.6
NXF1-212ENST00000531872 ZNF692Q9BU19 519 aaPredicted RBP11.33□□□□□ -0.6
NXF1-212ENST00000531872 TTC21AQ8NDW8 1320 aa11.33□□□□□ -0.6
NXF1-212ENST00000531872 BTAF1O14981 1849 aa11.32□□□□□ -0.6
NXF1-212ENST00000531872 QSER1Q2KHR3 1735 aa11.32□□□□□ -0.6
NXF1-212ENST00000531872 SOX12O15370 315 aa11.31□□□□□ -0.6
NXF1-212ENST00000531872 ERBB3P21860 1342 aa11.31□□□□□ -0.6
NXF1-212ENST00000531872 POLD1P28340 1107 aa11.3□□□□□ -0.6
NXF1-212ENST00000531872 SLC27A3Q5K4L6 730 aa11.3□□□□□ -0.6
NXF1-212ENST00000531872 PNPLA7Q6ZV29 1317 aa11.3□□□□□ -0.6
NXF1-212ENST00000531872 EVC2Q86UK5 1308 aa11.3□□□□□ -0.6
NXF1-212ENST00000531872 IL2RBP14784 551 aa11.29□□□□□ -0.6
NXF1-212ENST00000531872 NLGN2Q8NFZ4 835 aa11.29□□□□□ -0.6
NXF1-212ENST00000531872 PELP1Q8IZL8 1130 aaKnown RBP11.28□□□□□ -0.6
NXF1-212ENST00000531872 KLHL34Q8N239 644 aa11.28□□□□□ -0.6
NXF1-212ENST00000531872 USP31Q70CQ4 1352 aa11.28□□□□□ -0.6
NXF1-212ENST00000531872 GRIN3BO60391 1043 aa11.27□□□□□ -0.61
NXF1-212ENST00000531872 YBX3P16989 372 aaKnown RBP eCLIP11.27□□□□□ -0.61
NXF1-212ENST00000531872 NLRP2Q9NX02 1062 aa11.27□□□□□ -0.61
NXF1-212ENST00000531872 USP54Q70EL1 1684 aa11.27□□□□□ -0.61
NXF1-212ENST00000531872 TUBGCP6Q96RT7 1819 aa11.26□□□□□ -0.61
NXF1-212ENST00000531872 KTN1Q86UP2 1357 aaKnown RBP11.26□□□□□ -0.61
NXF1-212ENST00000531872 KAT6BQ8WYB5 2073 aa11.26□□□□□ -0.61
NXF1-212ENST00000531872 ANKRD24Q8TF21 1146 aa11.25□□□□□ -0.61
NXF1-212ENST00000531872 TFCP2L1Q9NZI6 479 aa11.25□□□□□ -0.61
NXF1-212ENST00000531872 MON2Q7Z3U7 1717 aa11.24□□□□□ -0.61
NXF1-212ENST00000531872 ATP10DQ9P241 1426 aa11.24□□□□□ -0.61
NXF1-212ENST00000531872 KCNQ4P56696 695 aa11.23□□□□□ -0.61
NXF1-212ENST00000531872 LY75O60449 1722 aa11.23□□□□□ -0.61
NXF1-212ENST00000531872 LTN1O94822 1766 aa11.23□□□□□ -0.61
NXF1-212ENST00000531872 ADCY9O60503 1353 aa11.22□□□□□ -0.61
NXF1-212ENST00000531872 NSD2O96028 1365 aa11.22□□□□□ -0.61
NXF1-212ENST00000531872 HSPA6P17066 643 aa11.22□□□□□ -0.61
NXF1-212ENST00000531872 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.22□□□□□ -0.61
NXF1-212ENST00000531872 ANKRD36BQ8N2N9 1353 aa11.22□□□□□ -0.61
NXF1-212ENST00000531872 DDX54Q8TDD1 881 aaKnown RBP11.22□□□□□ -0.61
NXF1-212ENST00000531872 CD163L1Q9NR16 1453 aa11.21□□□□□ -0.61
NXF1-212ENST00000531872 SBNO2Q9Y2G9 1366 aa11.21□□□□□ -0.61
NXF1-212ENST00000531872 PRIM1P49642 420 aaKnown RBP11.21□□□□□ -0.61
NXF1-212ENST00000531872 NME9Q86XW9 330 aa11.21□□□□□ -0.61
NXF1-212ENST00000531872 COL23A1Q86Y22 540 aaPredicted RBP11.21□□□□□ -0.61
NXF1-212ENST00000531872 IP6K1Q92551 441 aa11.2□□□□□ -0.62
NXF1-212ENST00000531872 L3MBTL2Q969R5 705 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 847.3 ms