RNA–Protein interactions for RNA: ENST00000531657.1

PPFIA1-219, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 3,036 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-219ENST00000531657 A2ML1A8K2U0 1454 aa12.05□□□□□ -0.48
PPFIA1-219ENST00000531657 MYOM1P52179 1685 aa12.05□□□□□ -0.48
PPFIA1-219ENST00000531657 IPO8O15397 1037 aaKnown RBP12.05□□□□□ -0.48
PPFIA1-219ENST00000531657 OTUD7AQ8TE49 926 aaPredicted RBP12.05□□□□□ -0.48
PPFIA1-219ENST00000531657 MTHFSDQ2M296 383 aaKnown RBP12.04□□□□□ -0.48
PPFIA1-219ENST00000531657 DDX19BQ9UMR2 479 aa12.04□□□□□ -0.48
PPFIA1-219ENST00000531657 VAMP4O75379 141 aa12.04□□□□□ -0.48
PPFIA1-219ENST00000531657 NFKBIBQ15653 356 aa12.04□□□□□ -0.48
PPFIA1-219ENST00000531657 FOXD4L5Q5VV16 416 aaPredicted RBP12.04□□□□□ -0.48
PPFIA1-219ENST00000531657 FOXD4L4Q8WXT5 416 aaPredicted RBP12.04□□□□□ -0.48
PPFIA1-219ENST00000531657 SBNO2Q9Y2G9 1366 aa12.04□□□□□ -0.48
PPFIA1-219ENST00000531657 PTPRMP28827 1452 aa12.03□□□□□ -0.48
PPFIA1-219ENST00000531657 MYO5BQ9ULV0 1848 aa12.03□□□□□ -0.48
PPFIA1-219ENST00000531657 GNAI1P63096 354 aa12.03□□□□□ -0.48
PPFIA1-219ENST00000531657 FKBP5Q13451 457 aaPredicted RBP12.03□□□□□ -0.48
PPFIA1-219ENST00000531657 USP35Q9P2H5 1018 aa12.03□□□□□ -0.48
PPFIA1-219ENST00000531657 DDRGK1Q96HY6 314 aa12.02□□□□□ -0.49
PPFIA1-219ENST00000531657 EYA1Q99502 592 aa12.02□□□□□ -0.49
PPFIA1-219ENST00000531657 PNNQ9H307 717 aaKnown RBP12.02□□□□□ -0.49
PPFIA1-219ENST00000531657 GOLGB1Q14789 3259 aaKnown RBP12.02□□□□□ -0.49
PPFIA1-219ENST00000531657 MAP4K4O95819 1239 aaPredicted RBP12.02□□□□□ -0.49
PPFIA1-219ENST00000531657 FOXD4L6Q3SYB3 417 aaPredicted RBP12.02□□□□□ -0.49
PPFIA1-219ENST00000531657 FOXD4L3Q6VB84 417 aaPredicted RBP12.02□□□□□ -0.49
PPFIA1-219ENST00000531657 MPRIPQ6WCQ1 1025 aa12.02□□□□□ -0.49
PPFIA1-219ENST00000531657 THEMISQ8N1K5 641 aaPredicted RBP12.02□□□□□ -0.49
PPFIA1-219ENST00000531657 RBM42Q9BTD8 480 aaKnown RBP12.02□□□□□ -0.49
PPFIA1-219ENST00000531657 ZNF330Q9Y3S2 320 aaPredicted RBP12.02□□□□□ -0.49
PPFIA1-219ENST00000531657 ALKQ9UM73 1620 aa12.01□□□□□ -0.49
PPFIA1-219ENST00000531657 AIMP1Q12904 312 aaKnown RBP12.01□□□□□ -0.49
PPFIA1-219ENST00000531657 TMEM2Q9UHN6 1383 aa12.01□□□□□ -0.49
PPFIA1-219ENST00000531657 JARID2Q92833 1246 aaPredicted RBP12.01□□□□□ -0.49
PPFIA1-219ENST00000531657 MEIS3Q99687 375 aa12.01□□□□□ -0.49
PPFIA1-219ENST00000531657 EXOC6BQ9Y2D4 811 aa12.01□□□□□ -0.49
PPFIA1-219ENST00000531657 NRXN1Q9ULB1 1477 aa12□□□□□ -0.49
PPFIA1-219ENST00000531657 CLTCQ00610 1675 aaKnown RBP12□□□□□ -0.49
PPFIA1-219ENST00000531657 CHRNA2Q15822 529 aa12□□□□□ -0.49
PPFIA1-219ENST00000531657 CSB-PGBD3P0DP91 1061 aa11.99□□□□□ -0.49
PPFIA1-219ENST00000531657 IL27Q8NEV9 243 aa11.99□□□□□ -0.49
PPFIA1-219ENST00000531657 LMTK2Q8IWU2 1503 aa11.99□□□□□ -0.49
PPFIA1-219ENST00000531657 CD163L1Q9NR16 1453 aa11.99□□□□□ -0.49
PPFIA1-219ENST00000531657 SETD1BQ9UPS6 1966 aaKnown RBP11.98□□□□□ -0.49
PPFIA1-219ENST00000531657 MRPL50Q8N5N7 158 aaKnown RBP11.98□□□□□ -0.49
PPFIA1-219ENST00000531657 CPS1P31327 1500 aa11.98□□□□□ -0.49
PPFIA1-219ENST00000531657 KIF16BQ96L93 1317 aa11.98□□□□□ -0.49
PPFIA1-219ENST00000531657 KCNQ3O43525 872 aa11.98□□□□□ -0.49
PPFIA1-219ENST00000531657 ZNF692Q9BU19 519 aaPredicted RBP11.98□□□□□ -0.49
PPFIA1-219ENST00000531657 TAOK2Q9UL54 1235 aa11.98□□□□□ -0.49
PPFIA1-219ENST00000531657 LAMC1P11047 1609 aa11.97□□□□□ -0.49
PPFIA1-219ENST00000531657 C22orf23Q9BZE7 217 aa11.97□□□□□ -0.49
PPFIA1-219ENST00000531657 IL1RAPL2Q9NP60 686 aa11.97□□□□□ -0.49
PPFIA1-219ENST00000531657 HAP1P54257 671 aaPredicted RBP11.97□□□□□ -0.49
PPFIA1-219ENST00000531657 PROSER2Q86WR7 435 aaPredicted RBP11.97□□□□□ -0.49
PPFIA1-219ENST00000531657 PHF23Q9BUL5 403 aaPredicted RBP11.97□□□□□ -0.49
PPFIA1-219ENST00000531657 LGR6Q9HBX8 967 aa11.97□□□□□ -0.49
PPFIA1-219ENST00000531657 ZBTB40Q9NUA8 1239 aa11.97□□□□□ -0.49
PPFIA1-219ENST00000531657 CCDC27Q2M243 656 aa11.97□□□□□ -0.49
PPFIA1-219ENST00000531657 CHD1LQ86WJ1 897 aa11.97□□□□□ -0.49
PPFIA1-219ENST00000531657 CFAP44Q96MT7 982 aa11.97□□□□□ -0.49
PPFIA1-219ENST00000531657 PPLO60437 1756 aa11.96□□□□□ -0.49
PPFIA1-219ENST00000531657 PHAXQ9H814 394 aaKnown RBP11.96□□□□□ -0.5
PPFIA1-219ENST00000531657 NLRP2Q9NX02 1062 aa11.96□□□□□ -0.5
PPFIA1-219ENST00000531657 BRPF3Q9ULD4 1205 aa11.96□□□□□ -0.5
PPFIA1-219ENST00000531657 RILPL2Q969X0 211 aa11.95□□□□□ -0.5
PPFIA1-219ENST00000531657 STK31Q9BXU1 1019 aa11.95□□□□□ -0.5
PPFIA1-219ENST00000531657 PHF8Q9UPP1 1060 aa11.95□□□□□ -0.5
PPFIA1-219ENST00000531657 NSD2O96028 1365 aa11.95□□□□□ -0.5
PPFIA1-219ENST00000531657 ARHGAP31Q2M1Z3 1444 aa11.95□□□□□ -0.5
PPFIA1-219ENST00000531657 ARHGEF40Q8TER5 1519 aa11.95□□□□□ -0.5
PPFIA1-219ENST00000531657 TRIM6-TRIM34B2RNG4 842 aa11.95□□□□□ -0.5
PPFIA1-219ENST00000531657 SIRT2Q8IXJ6 389 aa11.95□□□□□ -0.5
PPFIA1-219ENST00000531657 DIP2BQ9P265 1576 aa11.95□□□□□ -0.5
PPFIA1-219ENST00000531657 PRAMEF22A3QJZ6 481 aa11.95□□□□□ -0.5
PPFIA1-219ENST00000531657 ANKLE2Q86XL3 938 aa11.95□□□□□ -0.5
PPFIA1-219ENST00000531657 ZBTB7BO15156 539 aaPredicted RBP11.94□□□□□ -0.5
PPFIA1-219ENST00000531657 SLC39A6Q13433 755 aa11.94□□□□□ -0.5
PPFIA1-219ENST00000531657 BECN1Q14457 450 aa11.94□□□□□ -0.5
PPFIA1-219ENST00000531657 LARP6Q9BRS8 491 aaKnown RBP11.94□□□□□ -0.5
PPFIA1-219ENST00000531657 TBC1D2Q9BYX2 928 aa11.94□□□□□ -0.5
PPFIA1-219ENST00000531657 HSP90AB1P08238 724 aaKnown RBP11.94□□□□□ -0.5
PPFIA1-219ENST00000531657 IFT57Q9NWB7 429 aa11.94□□□□□ -0.5
PPFIA1-219ENST00000531657 RICTORQ6R327 1708 aa11.93□□□□□ -0.5
PPFIA1-219ENST00000531657 DDX54Q8TDD1 881 aaKnown RBP11.93□□□□□ -0.5
PPFIA1-219ENST00000531657 CFAP74Q9C0B2 1584 aa11.93□□□□□ -0.5
PPFIA1-219ENST00000531657 TMEM131LA2VDJ0 1609 aa11.93□□□□□ -0.5
PPFIA1-219ENST00000531657 USP19O94966 1318 aa11.93□□□□□ -0.5
PPFIA1-219ENST00000531657 CALD1Q05682 793 aaKnown RBP11.93□□□□□ -0.5
PPFIA1-219ENST00000531657 LMOD3Q0VAK6 560 aa11.93□□□□□ -0.5
PPFIA1-219ENST00000531657 NBPF6Q5VWK0 638 aa11.93□□□□□ -0.5
PPFIA1-219ENST00000531657 NBPF4Q96M43 638 aa11.93□□□□□ -0.5
PPFIA1-219ENST00000531657 PREX1Q8TCU6 1659 aa11.93□□□□□ -0.5
PPFIA1-219ENST00000531657 MYL6BP14649 208 aa11.92□□□□□ -0.5
PPFIA1-219ENST00000531657 OS9Q13438 667 aaPredicted RBP11.92□□□□□ -0.5
PPFIA1-219ENST00000531657 TEFQ10587 303 aa11.92□□□□□ -0.5
PPFIA1-219ENST00000531657 ZNF530Q6P9A1 599 aaPredicted RBP11.92□□□□□ -0.5
PPFIA1-219ENST00000531657 PTPRUQ92729 1446 aa11.92□□□□□ -0.5
PPFIA1-219ENST00000531657 HDGFL1Q5TGJ6 251 aa11.92□□□□□ -0.5
PPFIA1-219ENST00000531657 CHAMP1Q96JM3 812 aa11.92□□□□□ -0.5
PPFIA1-219ENST00000531657 ARHGEF28Q8N1W1 1705 aaKnown RBP11.91□□□□□ -0.5
PPFIA1-219ENST00000531657 EDC4Q6P2E9 1401 aaKnown RBP11.91□□□□□ -0.5
PPFIA1-219ENST00000531657 ZC3H13Q5T200 1668 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms