RNA–Protein interactions for RNA: ENST00000531346.1

TMEM136-205, Transcript of transmembrane protein 136, humanhuman

TSL 2

Gene TMEM136, Length 3,776 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM136-205ENST00000531346 TOPAZ1Q8N9V7 1692 aa13.5□□□□□ -0.25
TMEM136-205ENST00000531346 HOXC9P31274 260 aa13.5□□□□□ -0.25
TMEM136-205ENST00000531346 EMILIN1Q9Y6C2 1016 aa13.5□□□□□ -0.25
TMEM136-205ENST00000531346 U2AF1L5P0DN76 240 aaPredicted RBP13.49□□□□□ -0.25
TMEM136-205ENST00000531346 U2AF1Q01081 240 aaKnown RBP eCLIP13.49□□□□□ -0.25
TMEM136-205ENST00000531346 TCP11L2Q8N4U5 519 aa13.49□□□□□ -0.25
TMEM136-205ENST00000531346 MRS2Q9HD23 443 aa13.49□□□□□ -0.25
TMEM136-205ENST00000531346 SSH2Q76I76 1423 aa13.49□□□□□ -0.25
TMEM136-205ENST00000531346 SF3B2Q13435 895 aaKnown RBP13.49□□□□□ -0.25
TMEM136-205ENST00000531346 PER1O15534 1290 aaPredicted RBP13.48□□□□□ -0.25
TMEM136-205ENST00000531346 VPS72Q15906 364 aa13.48□□□□□ -0.25
TMEM136-205ENST00000531346 FNBP4Q8N3X1 1017 aaPredicted RBP13.48□□□□□ -0.25
TMEM136-205ENST00000531346 EXOC5O00471 708 aa13.48□□□□□ -0.25
TMEM136-205ENST00000531346 THRAP3Q9Y2W1 955 aaKnown RBP13.48□□□□□ -0.25
TMEM136-205ENST00000531346 OVOS2A0A0J9YW53 1432 aa13.47□□□□□ -0.25
TMEM136-205ENST00000531346 BLMP54132 1417 aaPredicted RBP13.47□□□□□ -0.25
TMEM136-205ENST00000531346 OVOS2Q6IE36 1432 aa13.47□□□□□ -0.25
TMEM136-205ENST00000531346 PPP2R1AP30153 589 aa13.47□□□□□ -0.25
TMEM136-205ENST00000531346 POLKQ9UBT6 870 aa13.47□□□□□ -0.25
TMEM136-205ENST00000531346 WDR17Q8IZU2 1322 aa13.47□□□□□ -0.25
TMEM136-205ENST00000531346 CD163L1Q9NR16 1453 aa13.47□□□□□ -0.25
TMEM136-205ENST00000531346 GJD4Q96KN9 370 aaPredicted RBP13.46□□□□□ -0.25
TMEM136-205ENST00000531346 PRKRIP1Q9H875 184 aaPredicted RBP13.46□□□□□ -0.25
TMEM136-205ENST00000531346 SPG7Q9UQ90 795 aa13.46□□□□□ -0.25
TMEM136-205ENST00000531346 MED1Q15648 1581 aaPredicted RBP13.46□□□□□ -0.25
TMEM136-205ENST00000531346 PLEKHO1Q53GL0 409 aaPredicted RBP13.46□□□□□ -0.25
TMEM136-205ENST00000531346 C1orf141Q5JVX7 400 aa13.46□□□□□ -0.25
TMEM136-205ENST00000531346 CARD10Q9BWT7 1032 aa13.46□□□□□ -0.25
TMEM136-205ENST00000531346 INSRP06213 1382 aa13.45□□□□□ -0.26
TMEM136-205ENST00000531346 AKAP12Q02952 1782 aa13.45□□□□□ -0.26
TMEM136-205ENST00000531346 HSP90AB2PQ58FF8 381 aa13.45□□□□□ -0.26
TMEM136-205ENST00000531346 IL2RBP14784 551 aa13.45□□□□□ -0.26
TMEM136-205ENST00000531346 DDB1Q16531 1140 aa13.45□□□□□ -0.26
TMEM136-205ENST00000531346 SHPRHQ149N8 1683 aa13.45□□□□□ -0.26
TMEM136-205ENST00000531346 MON2Q7Z3U7 1717 aa13.45□□□□□ -0.26
TMEM136-205ENST00000531346 LARP1Q6PKG0 1096 aaKnown RBP13.44□□□□□ -0.26
TMEM136-205ENST00000531346 HMGB2P26583 209 aaKnown RBP13.44□□□□□ -0.26
TMEM136-205ENST00000531346 FAM98CQ17RN3 349 aaKnown RBP13.44□□□□□ -0.26
TMEM136-205ENST00000531346 ERBB3P21860 1342 aa13.43□□□□□ -0.26
TMEM136-205ENST00000531346 HSP90AB1P08238 724 aaKnown RBP13.43□□□□□ -0.26
TMEM136-205ENST00000531346 RTF1Q92541 710 aaKnown RBP13.43□□□□□ -0.26
TMEM136-205ENST00000531346 FBLN1P23142 703 aa13.42□□□□□ -0.26
TMEM136-205ENST00000531346 AMOTQ4VCS5 1084 aa13.42□□□□□ -0.26
TMEM136-205ENST00000531346 SULT6B1Q6IMI4 303 aa13.42□□□□□ -0.26
TMEM136-205ENST00000531346 CRB1P82279 1406 aa13.41□□□□□ -0.26
TMEM136-205ENST00000531346 GAS2L2Q8NHY3 880 aa13.41□□□□□ -0.26
TMEM136-205ENST00000531346 EIF4A2Q14240 407 aaKnown RBP13.4□□□□□ -0.26
TMEM136-205ENST00000531346 SLIT3O75094 1523 aa13.4□□□□□ -0.26
TMEM136-205ENST00000531346 LMOD3Q0VAK6 560 aa13.4□□□□□ -0.27
TMEM136-205ENST00000531346 ZCRB1Q8TBF4 217 aaKnown RBP13.4□□□□□ -0.27
TMEM136-205ENST00000531346 DDX54Q8TDD1 881 aaKnown RBP13.4□□□□□ -0.27
TMEM136-205ENST00000531346 SPATA31A5Q5VU36 1347 aa13.39□□□□□ -0.27
TMEM136-205ENST00000531346 SPATA31A7Q8IWB4 1347 aa13.39□□□□□ -0.27
TMEM136-205ENST00000531346 TRPM3Q9HCF6 1732 aaPredicted RBP13.39□□□□□ -0.27
TMEM136-205ENST00000531346 SEPT12Q8IYM1 358 aa13.39□□□□□ -0.27
TMEM136-205ENST00000531346 ALS2Q96Q42 1657 aa13.39□□□□□ -0.27
TMEM136-205ENST00000531346 KIF20BQ96Q89 1820 aa13.39□□□□□ -0.27
TMEM136-205ENST00000531346 COL14A1Q05707 1796 aaKnown RBP13.38□□□□□ -0.27
TMEM136-205ENST00000531346 SPATA31A1Q5TZJ5 1347 aa13.38□□□□□ -0.27
TMEM136-205ENST00000531346 COL22A1Q8NFW1 1626 aaPredicted RBP13.38□□□□□ -0.27
TMEM136-205ENST00000531346 BARGINQ6ZT62 677 aa13.38□□□□□ -0.27
TMEM136-205ENST00000531346 PARD3Q8TEW0 1356 aa13.38□□□□□ -0.27
TMEM136-205ENST00000531346 HMOX1P09601 288 aa13.38□□□□□ -0.27
TMEM136-205ENST00000531346 KRT27Q7Z3Y8 459 aa13.38□□□□□ -0.27
TMEM136-205ENST00000531346 USHBP1Q8N6Y0 703 aa13.37□□□□□ -0.27
TMEM136-205ENST00000531346 ZNF530Q6P9A1 599 aaPredicted RBP13.37□□□□□ -0.27
TMEM136-205ENST00000531346 FAM9BQ8IZU0 186 aa13.37□□□□□ -0.27
TMEM136-205ENST00000531346 EYA1Q99502 592 aa13.37□□□□□ -0.27
TMEM136-205ENST00000531346 AXIN2Q9Y2T1 843 aa13.37□□□□□ -0.27
TMEM136-205ENST00000531346 PIK3C2AO00443 1686 aa13.37□□□□□ -0.27
TMEM136-205ENST00000531346 MYOM1P52179 1685 aa13.37□□□□□ -0.27
TMEM136-205ENST00000531346 CDK12Q9NYV4 1490 aaPredicted RBP13.37□□□□□ -0.27
TMEM136-205ENST00000531346 FCHSD2O94868 740 aa13.37□□□□□ -0.27
TMEM136-205ENST00000531346 NPM2Q86SE8 214 aaKnown RBP13.36□□□□□ -0.27
TMEM136-205ENST00000531346 LRP6O75581 1613 aa13.36□□□□□ -0.27
TMEM136-205ENST00000531346 CCER2I3L3R5 266 aa13.36□□□□□ -0.27
TMEM136-205ENST00000531346 ABCC6O95255 1503 aa13.36□□□□□ -0.27
TMEM136-205ENST00000531346 IFNL2Q8IZJ0 200 aa13.36□□□□□ -0.27
TMEM136-205ENST00000531346 SYTL4Q96C24 671 aaPredicted RBP13.36□□□□□ -0.27
TMEM136-205ENST00000531346 SLIT2O94813 1529 aa13.36□□□□□ -0.27
TMEM136-205ENST00000531346 CALD1Q05682 793 aaKnown RBP13.35□□□□□ -0.27
TMEM136-205ENST00000531346 NBPF6Q5VWK0 638 aa13.35□□□□□ -0.27
TMEM136-205ENST00000531346 FAM196AQ6ZSG2 479 aa13.35□□□□□ -0.27
TMEM136-205ENST00000531346 NBPF4Q96M43 638 aa13.35□□□□□ -0.27
TMEM136-205ENST00000531346 PCDH11XQ9BZA7 1347 aa13.34□□□□□ -0.27
TMEM136-205ENST00000531346 PCDH11YQ9BZA8 1340 aa13.34□□□□□ -0.27
TMEM136-205ENST00000531346 TEFQ10587 303 aa13.34□□□□□ -0.27
TMEM136-205ENST00000531346 COL5A2P05997 1499 aaPredicted RBP13.34□□□□□ -0.27
TMEM136-205ENST00000531346 PRKAR2BP31323 418 aa13.34□□□□□ -0.27
TMEM136-205ENST00000531346 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.34□□□□□ -0.27
TMEM136-205ENST00000531346 NRKQ7Z2Y5 1582 aa13.34□□□□□ -0.27
TMEM136-205ENST00000531346 POTEAQ6S8J7 498 aa13.33□□□□□ -0.27
TMEM136-205ENST00000531346 IL13P35225 146 aa13.33□□□□□ -0.28
TMEM136-205ENST00000531346 PHRF1Q9P1Y6 1649 aaKnown RBP13.32□□□□□ -0.28
TMEM136-205ENST00000531346 ATRNO75882 1429 aa13.32□□□□□ -0.28
TMEM136-205ENST00000531346 NFAT5O94916 1531 aa13.31□□□□□ -0.28
TMEM136-205ENST00000531346 RUNDC1Q96C34 613 aa13.31□□□□□ -0.28
TMEM136-205ENST00000531346 IGSF1Q8N6C5 1336 aa13.31□□□□□ -0.28
TMEM136-205ENST00000531346 BAG6P46379 1132 aa13.31□□□□□ -0.28
TMEM136-205ENST00000531346 NEUROD2Q15784 382 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms