RNA–Protein interactions for RNA: ENST00000531336.1

SMPD1-206, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-206ENST00000531336 UNC5CLQ8IV45 518 aa18.89■□□□□ 0.61
SMPD1-206ENST00000531336 ATRNO75882 1429 aa18.89■□□□□ 0.61
SMPD1-206ENST00000531336 RRS1Q15050 365 aaKnown RBP18.88■□□□□ 0.61
SMPD1-206ENST00000531336 MORC1Q86VD1 984 aa18.88■□□□□ 0.61
SMPD1-206ENST00000531336 MAP3K19Q56UN5 1328 aa18.88■□□□□ 0.61
SMPD1-206ENST00000531336 COL5A2P05997 1499 aaPredicted RBP18.88■□□□□ 0.61
SMPD1-206ENST00000531336 POTEAQ6S8J7 498 aa18.87■□□□□ 0.61
SMPD1-206ENST00000531336 STRN4Q9NRL3 753 aa18.87■□□□□ 0.61
SMPD1-206ENST00000531336 NPC1L1Q9UHC9 1359 aa18.87■□□□□ 0.61
SMPD1-206ENST00000531336 TRPC5Q9UL62 973 aaPredicted RBP18.86■□□□□ 0.61
SMPD1-206ENST00000531336 RTL1A6NKG5 1358 aa18.85■□□□□ 0.61
SMPD1-206ENST00000531336 AMPHP49418 695 aa18.85■□□□□ 0.61
SMPD1-206ENST00000531336 QTRT2Q9H974 415 aaKnown RBP18.85■□□□□ 0.61
SMPD1-206ENST00000531336 AXIN2Q9Y2T1 843 aa18.85■□□□□ 0.61
SMPD1-206ENST00000531336 CCDC9Q9Y3X0 531 aaKnown RBP18.85■□□□□ 0.61
SMPD1-206ENST00000531336 GLI3P10071 1580 aa18.85■□□□□ 0.61
SMPD1-206ENST00000531336 EVA1CP58658 441 aa18.84■□□□□ 0.61
SMPD1-206ENST00000531336 EMILIN1Q9Y6C2 1016 aa18.84■□□□□ 0.61
SMPD1-206ENST00000531336 BLMP54132 1417 aaPredicted RBP18.83■□□□□ 0.61
SMPD1-206ENST00000531336 FAM208AQ9UK61 1670 aaKnown RBP18.83■□□□□ 0.61
SMPD1-206ENST00000531336 PPM1GO15355 546 aaPredicted RBP18.82■□□□□ 0.6
SMPD1-206ENST00000531336 HOXC9P31274 260 aa18.82■□□□□ 0.6
SMPD1-206ENST00000531336 VPS72Q15906 364 aa18.82■□□□□ 0.6
SMPD1-206ENST00000531336 IP6K1Q92551 441 aa18.82■□□□□ 0.6
SMPD1-206ENST00000531336 FLT4P35916 1363 aa18.81■□□□□ 0.6
SMPD1-206ENST00000531336 RGPD2P0DJD1 1756 aa18.81■□□□□ 0.6
SMPD1-206ENST00000531336 CSB-PGBD3P0DP91 1061 aa18.81■□□□□ 0.6
SMPD1-206ENST00000531336 LARP1Q6PKG0 1096 aaKnown RBP18.81■□□□□ 0.6
SMPD1-206ENST00000531336 WNK3Q9BYP7 1800 aa18.81■□□□□ 0.6
SMPD1-206ENST00000531336 SMG6Q86US8 1419 aaKnown RBP18.8■□□□□ 0.6
SMPD1-206ENST00000531336 KIF24Q5T7B8 1368 aa18.8■□□□□ 0.6
SMPD1-206ENST00000531336 ERBB3P21860 1342 aa18.79■□□□□ 0.6
SMPD1-206ENST00000531336 WDR17Q8IZU2 1322 aa18.79■□□□□ 0.6
SMPD1-206ENST00000531336 RXRBP28702 533 aa18.79■□□□□ 0.6
SMPD1-206ENST00000531336 RBM6P78332 1123 aaKnown RBP18.79■□□□□ 0.6
SMPD1-206ENST00000531336 ANKRD24Q8TF21 1146 aa18.79■□□□□ 0.6
SMPD1-206ENST00000531336 LTV1Q96GA3 475 aaPredicted RBP18.79■□□□□ 0.6
SMPD1-206ENST00000531336 GJD4Q96KN9 370 aaPredicted RBP18.79■□□□□ 0.6
SMPD1-206ENST00000531336 POLKQ9UBT6 870 aa18.79■□□□□ 0.6
SMPD1-206ENST00000531336 CRB1P82279 1406 aa18.79■□□□□ 0.6
SMPD1-206ENST00000531336 SPATA31A5Q5VU36 1347 aa18.78■□□□□ 0.6
SMPD1-206ENST00000531336 SPATA31A7Q8IWB4 1347 aa18.78■□□□□ 0.6
SMPD1-206ENST00000531336 CDK12Q9NYV4 1490 aaPredicted RBP18.77■□□□□ 0.6
SMPD1-206ENST00000531336 SOCS7O14512 581 aa18.77■□□□□ 0.6
SMPD1-206ENST00000531336 TOM1L2Q6ZVM7 507 aa18.77■□□□□ 0.6
SMPD1-206ENST00000531336 USP35Q9P2H5 1018 aa18.77■□□□□ 0.6
SMPD1-206ENST00000531336 SPATA31A1Q5TZJ5 1347 aa18.76■□□□□ 0.59
SMPD1-206ENST00000531336 HSP90AB2PQ58FF8 381 aa18.76■□□□□ 0.59
SMPD1-206ENST00000531336 INSRP06213 1382 aa18.76■□□□□ 0.59
SMPD1-206ENST00000531336 RGS12O14924 1447 aa18.75■□□□□ 0.59
SMPD1-206ENST00000531336 THSD7AQ9UPZ6 1657 aa18.74■□□□□ 0.59
SMPD1-206ENST00000531336 PARD3Q8TEW0 1356 aa18.74■□□□□ 0.59
SMPD1-206ENST00000531336 NLRP2Q9NX02 1062 aa18.74■□□□□ 0.59
SMPD1-206ENST00000531336 BRWD3Q6RI45 1802 aa18.74■□□□□ 0.59
SMPD1-206ENST00000531336 FAM98CQ17RN3 349 aaKnown RBP18.73■□□□□ 0.59
SMPD1-206ENST00000531336 A0A0G2JS52 829 aa18.72■□□□□ 0.59
SMPD1-206ENST00000531336 MTHFSP49914 203 aa18.72■□□□□ 0.59
SMPD1-206ENST00000531336 MYT1Q01538 1121 aa18.72■□□□□ 0.59
SMPD1-206ENST00000531336 TCP11L2Q8N4U5 519 aa18.72■□□□□ 0.59
SMPD1-206ENST00000531336 CARD10Q9BWT7 1032 aa18.71■□□□□ 0.59
SMPD1-206ENST00000531336 PPP2R1AP30153 589 aa18.7■□□□□ 0.58
SMPD1-206ENST00000531336 ILDR2Q71H61 639 aa18.7■□□□□ 0.58
SMPD1-206ENST00000531336 PARP4Q9UKK3 1724 aaKnown RBP18.7■□□□□ 0.58
SMPD1-206ENST00000531336 LRRC37A3O60309 1634 aa18.7■□□□□ 0.58
SMPD1-206ENST00000531336 EIF4A2Q14240 407 aaKnown RBP18.69■□□□□ 0.58
SMPD1-206ENST00000531336 THRAP3Q9Y2W1 955 aaKnown RBP18.69■□□□□ 0.58
SMPD1-206ENST00000531336 BARGINQ6ZT62 677 aa18.68■□□□□ 0.58
SMPD1-206ENST00000531336 USHBP1Q8N6Y0 703 aa18.68■□□□□ 0.58
SMPD1-206ENST00000531336 COL3A1P02461 1466 aaPredicted RBP18.68■□□□□ 0.58
SMPD1-206ENST00000531336 RALBP1Q15311 655 aa18.67■□□□□ 0.58
SMPD1-206ENST00000531336 SEPT12Q8IYM1 358 aa18.67■□□□□ 0.58
SMPD1-206ENST00000531336 DISP2A7MBM2 1401 aa18.66■□□□□ 0.58
SMPD1-206ENST00000531336 RGPD1P0DJD0 1748 aa18.66■□□□□ 0.58
SMPD1-206ENST00000531336 NBPF6Q5VWK0 638 aa18.66■□□□□ 0.58
SMPD1-206ENST00000531336 NBPF4Q96M43 638 aa18.66■□□□□ 0.58
SMPD1-206ENST00000531336 ONECUT3O60422 494 aaPredicted RBP18.64■□□□□ 0.57
SMPD1-206ENST00000531336 MEGF6O75095 1541 aa18.64■□□□□ 0.57
SMPD1-206ENST00000531336 CFAP53Q96M91 514 aa18.63■□□□□ 0.57
SMPD1-206ENST00000531336 EYA1Q99502 592 aa18.63■□□□□ 0.57
SMPD1-206ENST00000531336 PRKRIP1Q9H875 184 aaPredicted RBP18.63■□□□□ 0.57
SMPD1-206ENST00000531336 MYBBP1AQ9BQG0 1328 aaKnown RBP18.63■□□□□ 0.57
SMPD1-206ENST00000531336 NCAPD2Q15021 1401 aa18.63■□□□□ 0.57
SMPD1-206ENST00000531336 IL2RBP14784 551 aa18.62■□□□□ 0.57
SMPD1-206ENST00000531336 SHANK3Q9BYB0 1731 aa18.61■□□□□ 0.57
SMPD1-206ENST00000531336 TNS2Q63HR2 1409 aa18.61■□□□□ 0.57
SMPD1-206ENST00000531336 IGSF1Q8N6C5 1336 aa18.61■□□□□ 0.57
SMPD1-206ENST00000531336 DIAPH1O60610 1272 aaKnown RBP18.61■□□□□ 0.57
SMPD1-206ENST00000531336 IL13P35225 146 aa18.61■□□□□ 0.57
SMPD1-206ENST00000531336 CDCA7Q9BWT1 371 aaPredicted RBP18.61■□□□□ 0.57
SMPD1-206ENST00000531336 OVOS2A0A0G2JMS6 1433 aa18.59■□□□□ 0.57
SMPD1-206ENST00000531336 RAPGEF4Q8WZA2 1011 aa18.59■□□□□ 0.57
SMPD1-206ENST00000531336 PKD1L3Q7Z443 1732 aa18.59■□□□□ 0.57
SMPD1-206ENST00000531336 ANP32CO43423 234 aa18.58■□□□□ 0.56
SMPD1-206ENST00000531336 DDB1Q16531 1140 aa18.58■□□□□ 0.56
SMPD1-206ENST00000531336 KRT27Q7Z3Y8 459 aa18.58■□□□□ 0.56
SMPD1-206ENST00000531336 U2SURPO15042 1029 aaKnown RBP18.57■□□□□ 0.56
SMPD1-206ENST00000531336 TATP17735 454 aaPredicted RBP18.56■□□□□ 0.56
SMPD1-206ENST00000531336 PDE3BQ13370 1112 aa18.56■□□□□ 0.56
SMPD1-206ENST00000531336 AEBP1Q8IUX7 1158 aa18.56■□□□□ 0.56
SMPD1-206ENST00000531336 EXOC5O00471 708 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms