RNA–Protein interactions for RNA: ENST00000531319.1

AP004608.1-201, humanhuman

TSL 2 BASIC

Gene AP004608.1, Length 1,402 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-201ENST00000531319 RGPD5Q99666 1765 aa29.32■■■□□ 2.28
AP004608.1-201ENST00000531319 NSD2O96028 1365 aa29.31■■■□□ 2.28
AP004608.1-201ENST00000531319 VPS72Q15906 364 aa29.31■■■□□ 2.28
AP004608.1-201ENST00000531319 MAP3K19Q56UN5 1328 aa29.31■■■□□ 2.28
AP004608.1-201ENST00000531319 PEAK1Q9H792 1746 aa29.29■■■□□ 2.28
AP004608.1-201ENST00000531319 RRS1Q15050 365 aaKnown RBP29.28■■■□□ 2.28
AP004608.1-201ENST00000531319 RBM6P78332 1123 aaKnown RBP29.27■■■□□ 2.28
AP004608.1-201ENST00000531319 GJD4Q96KN9 370 aaPredicted RBP29.27■■■□□ 2.28
AP004608.1-201ENST00000531319 RXRBP28702 533 aa29.26■■■□□ 2.27
AP004608.1-201ENST00000531319 STRN4Q9NRL3 753 aa29.26■■■□□ 2.27
AP004608.1-201ENST00000531319 LARP1Q6PKG0 1096 aaKnown RBP29.25■■■□□ 2.27
AP004608.1-201ENST00000531319 SPATA31A5Q5VU36 1347 aa29.24■■■□□ 2.27
AP004608.1-201ENST00000531319 SPATA31A7Q8IWB4 1347 aa29.24■■■□□ 2.27
AP004608.1-201ENST00000531319 RGS12O14924 1447 aa29.24■■■□□ 2.27
AP004608.1-201ENST00000531319 CDK12Q9NYV4 1490 aaPredicted RBP29.23■■■□□ 2.27
AP004608.1-201ENST00000531319 IP6K1Q92551 441 aa29.22■■■□□ 2.27
AP004608.1-201ENST00000531319 NPC1L1Q9UHC9 1359 aa29.22■■■□□ 2.27
AP004608.1-201ENST00000531319 HOXC9P31274 260 aa29.21■■■□□ 2.27
AP004608.1-201ENST00000531319 EMILIN1Q9Y6C2 1016 aa29.21■■■□□ 2.27
AP004608.1-201ENST00000531319 RTL1A6NKG5 1358 aa29.21■■■□□ 2.27
AP004608.1-201ENST00000531319 TNNT2P45379 298 aaPredicted RBP29.2■■■□□ 2.27
AP004608.1-201ENST00000531319 BLMP54132 1417 aaPredicted RBP29.2■■■□□ 2.27
AP004608.1-201ENST00000531319 SPATA31A1Q5TZJ5 1347 aa29.2■■■□□ 2.27
AP004608.1-201ENST00000531319 WDR17Q8IZU2 1322 aa29.2■■■□□ 2.26
AP004608.1-201ENST00000531319 ERBB3P21860 1342 aa29.19■■■□□ 2.26
AP004608.1-201ENST00000531319 EVA1CP58658 441 aa29.19■■■□□ 2.26
AP004608.1-201ENST00000531319 CC2D1BQ5T0F9 858 aaKnown RBP29.19■■■□□ 2.26
AP004608.1-201ENST00000531319 CCDC9Q9Y3X0 531 aaKnown RBP29.19■■■□□ 2.26
AP004608.1-201ENST00000531319 CRB1P82279 1406 aa29.18■■■□□ 2.26
AP004608.1-201ENST00000531319 MORC1Q86VD1 984 aa29.18■■■□□ 2.26
AP004608.1-201ENST00000531319 POLKQ9UBT6 870 aa29.18■■■□□ 2.26
AP004608.1-201ENST00000531319 MAP2P11137 1827 aaKnown RBP29.17■■■□□ 2.26
AP004608.1-201ENST00000531319 SMG6Q86US8 1419 aaKnown RBP29.16■■■□□ 2.26
AP004608.1-201ENST00000531319 AMPHP49418 695 aa29.16■■■□□ 2.26
AP004608.1-201ENST00000531319 THSD7AQ9UPZ6 1657 aa29.16■■■□□ 2.26
AP004608.1-201ENST00000531319 KIF24Q5T7B8 1368 aa29.15■■■□□ 2.26
AP004608.1-201ENST00000531319 ONECUT3O60422 494 aaPredicted RBP29.15■■■□□ 2.26
AP004608.1-201ENST00000531319 DDX10Q13206 875 aaKnown RBP29.15■■■□□ 2.26
AP004608.1-201ENST00000531319 FLT4P35916 1363 aa29.15■■■□□ 2.26
AP004608.1-201ENST00000531319 ANKRD24Q8TF21 1146 aa29.14■■■□□ 2.26
AP004608.1-201ENST00000531319 HSP90AB2PQ58FF8 381 aa29.13■■■□□ 2.25
AP004608.1-201ENST00000531319 FAM98CQ17RN3 349 aaKnown RBP29.12■■■□□ 2.25
AP004608.1-201ENST00000531319 USP35Q9P2H5 1018 aa29.12■■■□□ 2.25
AP004608.1-201ENST00000531319 ZNF316A6NFI3 1004 aaPredicted RBP29.11■■■□□ 2.25
AP004608.1-201ENST00000531319 INSRP06213 1382 aa29.11■■■□□ 2.25
AP004608.1-201ENST00000531319 CNGB1Q14028 1251 aaPredicted RBP29.11■■■□□ 2.25
AP004608.1-201ENST00000531319 TOM1L2Q6ZVM7 507 aa29.11■■■□□ 2.25
AP004608.1-201ENST00000531319 FAM208AQ9UK61 1670 aaKnown RBP29.09■■■□□ 2.25
AP004608.1-201ENST00000531319 CSB-PGBD3P0DP91 1061 aa29.09■■■□□ 2.25
AP004608.1-201ENST00000531319 LTV1Q96GA3 475 aaPredicted RBP29.09■■■□□ 2.25
AP004608.1-201ENST00000531319 WNK3Q9BYP7 1800 aa29.09■■■□□ 2.25
AP004608.1-201ENST00000531319 RGPD2P0DJD1 1756 aa29.08■■■□□ 2.25
AP004608.1-201ENST00000531319 TCP11L2Q8N4U5 519 aa29.08■■■□□ 2.25
AP004608.1-201ENST00000531319 CARD10Q9BWT7 1032 aa29.08■■■□□ 2.25
AP004608.1-201ENST00000531319 BRWD3Q6RI45 1802 aa29.07■■■□□ 2.24
AP004608.1-201ENST00000531319 PPM1GO15355 546 aaPredicted RBP29.07■■■□□ 2.24
AP004608.1-201ENST00000531319 BARGINQ6ZT62 677 aa29.07■■■□□ 2.24
AP004608.1-201ENST00000531319 SEPT12Q8IYM1 358 aa29.07■■■□□ 2.24
AP004608.1-201ENST00000531319 DISP2A7MBM2 1401 aa29.05■■■□□ 2.24
AP004608.1-201ENST00000531319 NLRP2Q9NX02 1062 aa29.04■■■□□ 2.24
AP004608.1-201ENST00000531319 THRAP3Q9Y2W1 955 aaKnown RBP29.04■■■□□ 2.24
AP004608.1-201ENST00000531319 EP400Q96L91 3159 aa29.04■■■□□ 2.24
AP004608.1-201ENST00000531319 PARP4Q9UKK3 1724 aaKnown RBP29.02■■■□□ 2.24
AP004608.1-201ENST00000531319 NBPF6Q5VWK0 638 aa29.01■■■□□ 2.23
AP004608.1-201ENST00000531319 NBPF4Q96M43 638 aa29.01■■■□□ 2.23
AP004608.1-201ENST00000531319 LRRC37A3O60309 1634 aa29■■■□□ 2.23
AP004608.1-201ENST00000531319 PARD3Q8TEW0 1356 aa29■■■□□ 2.23
AP004608.1-201ENST00000531319 MTHFSP49914 203 aa28.99■■■□□ 2.23
AP004608.1-201ENST00000531319 EIF4A2Q14240 407 aaKnown RBP28.98■■■□□ 2.23
AP004608.1-201ENST00000531319 NCAPD2Q15021 1401 aa28.98■■■□□ 2.23
AP004608.1-201ENST00000531319 USHBP1Q8N6Y0 703 aa28.96■■■□□ 2.23
AP004608.1-201ENST00000531319 COL3A1P02461 1466 aaPredicted RBP28.96■■■□□ 2.23
AP004608.1-201ENST00000531319 A0A0G2JS52 829 aa28.95■■■□□ 2.23
AP004608.1-201ENST00000531319 MYT1Q01538 1121 aa28.95■■■□□ 2.23
AP004608.1-201ENST00000531319 PPP2R1AP30153 589 aa28.94■■■□□ 2.22
AP004608.1-201ENST00000531319 MEGF6O75095 1541 aa28.93■■■□□ 2.22
AP004608.1-201ENST00000531319 EYA1Q99502 592 aa28.93■■■□□ 2.22
AP004608.1-201ENST00000531319 RGPD1P0DJD0 1748 aa28.92■■■□□ 2.22
AP004608.1-201ENST00000531319 KRT27Q7Z3Y8 459 aa28.91■■■□□ 2.22
AP004608.1-201ENST00000531319 IL2RBP14784 551 aa28.89■■■□□ 2.22
AP004608.1-201ENST00000531319 IL13P35225 146 aa28.89■■■□□ 2.22
AP004608.1-201ENST00000531319 FAM182BQ5T319 152 aa28.89■■■□□ 2.22
AP004608.1-201ENST00000531319 CDCA7Q9BWT1 371 aaPredicted RBP28.89■■■□□ 2.22
AP004608.1-201ENST00000531319 IGSF1Q8N6C5 1336 aa28.88■■■□□ 2.21
AP004608.1-201ENST00000531319 TNS2Q63HR2 1409 aa28.88■■■□□ 2.21
AP004608.1-201ENST00000531319 OVOS2A0A0G2JMS6 1433 aa28.86■■■□□ 2.21
AP004608.1-201ENST00000531319 SOCS7O14512 581 aa28.86■■■□□ 2.21
AP004608.1-201ENST00000531319 DDB1Q16531 1140 aa28.86■■■□□ 2.21
AP004608.1-201ENST00000531319 SHANK3Q9BYB0 1731 aa28.85■■■□□ 2.21
AP004608.1-201ENST00000531319 RALBP1Q15311 655 aa28.82■■■□□ 2.2
AP004608.1-201ENST00000531319 MARCH10Q8NA82 808 aaPredicted RBP28.82■■■□□ 2.2
AP004608.1-201ENST00000531319 PDE3BQ13370 1112 aa28.8■■■□□ 2.2
AP004608.1-201ENST00000531319 AEBP1Q8IUX7 1158 aa28.8■■■□□ 2.2
AP004608.1-201ENST00000531319 DIAPH1O60610 1272 aaKnown RBP28.79■■■□□ 2.2
AP004608.1-201ENST00000531319 UPF1Q92900 1129 aaKnown RBP eCLIP28.79■■■□□ 2.2
AP004608.1-201ENST00000531319 PRKRIP1Q9H875 184 aaPredicted RBP28.79■■■□□ 2.2
AP004608.1-201ENST00000531319 KDRP35968 1356 aa28.79■■■□□ 2.2
AP004608.1-201ENST00000531319 EXOC5O00471 708 aa28.78■■■□□ 2.2
AP004608.1-201ENST00000531319 PKD1L3Q7Z443 1732 aa28.78■■■□□ 2.2
AP004608.1-201ENST00000531319 RAPGEF4Q8WZA2 1011 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms