RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 CAMKK2Q96RR4 588 aa31.43■■■□□ 2.62
TRAPPC4-210ENST00000531290 SLC24A1O60721 1099 aa31.42■■■□□ 2.62
TRAPPC4-210ENST00000531290 DDB1Q16531 1140 aa31.42■■■□□ 2.62
TRAPPC4-210ENST00000531290 NME9Q86XW9 330 aa31.41■■■□□ 2.62
TRAPPC4-210ENST00000531290 ST20-MTHFSA0A0A6YYL1 179 aa31.4■■■□□ 2.62
TRAPPC4-210ENST00000531290 CDCA7Q9BWT1 371 aaPredicted RBP31.4■■■□□ 2.62
TRAPPC4-210ENST00000531290 RGPD1P0DJD0 1748 aa31.4■■■□□ 2.62
TRAPPC4-210ENST00000531290 USP31Q70CQ4 1352 aa31.39■■■□□ 2.62
TRAPPC4-210ENST00000531290 R3HDM1Q15032 1099 aaKnown RBP31.38■■■□□ 2.61
TRAPPC4-210ENST00000531290 CARD10Q9BWT7 1032 aa31.38■■■□□ 2.61
TRAPPC4-210ENST00000531290 PARD3Q8TEW0 1356 aa31.37■■■□□ 2.61
TRAPPC4-210ENST00000531290 TESK2Q96S53 571 aa31.36■■■□□ 2.61
TRAPPC4-210ENST00000531290 CD163L1Q9NR16 1453 aa31.35■■■□□ 2.61
TRAPPC4-210ENST00000531290 AKAP12Q02952 1782 aa31.34■■■□□ 2.61
TRAPPC4-210ENST00000531290 EDC4Q6P2E9 1401 aaKnown RBP31.32■■■□□ 2.61
TRAPPC4-210ENST00000531290 OVOS2A0A0G2JMS6 1433 aa31.32■■■□□ 2.6
TRAPPC4-210ENST00000531290 OVOS2A0A0J9YW53 1432 aa31.32■■■□□ 2.6
TRAPPC4-210ENST00000531290 OVOS2Q6IE36 1432 aa31.32■■■□□ 2.6
TRAPPC4-210ENST00000531290 A0A1W2PP64 1363 aa31.31■■■□□ 2.6
TRAPPC4-210ENST00000531290 NFAT5O94916 1531 aa31.3■■■□□ 2.6
TRAPPC4-210ENST00000531290 COL18A1P39060 1754 aa31.3■■■□□ 2.6
TRAPPC4-210ENST00000531290 EXOC5O00471 708 aa31.29■■■□□ 2.6
TRAPPC4-210ENST00000531290 NBPF14Q5TI25 921 aa31.29■■■□□ 2.6
TRAPPC4-210ENST00000531290 NINLQ9Y2I6 1382 aa31.29■■■□□ 2.6
TRAPPC4-210ENST00000531290 CCDC7Q96M83 1385 aa31.28■■■□□ 2.6
TRAPPC4-210ENST00000531290 TNS1Q9HBL0 1735 aaKnown RBP31.27■■■□□ 2.6
TRAPPC4-210ENST00000531290 MARCH10Q8NA82 808 aaPredicted RBP31.27■■■□□ 2.6
TRAPPC4-210ENST00000531290 NLRP2Q9NX02 1062 aa31.26■■■□□ 2.59
TRAPPC4-210ENST00000531290 PARP4Q9UKK3 1724 aaKnown RBP31.26■■■□□ 2.59
TRAPPC4-210ENST00000531290 MON2Q7Z3U7 1717 aa31.25■■■□□ 2.59
TRAPPC4-210ENST00000531290 TMF1P82094 1093 aa31.25■■■□□ 2.59
TRAPPC4-210ENST00000531290 BCL11BQ9C0K0 894 aaPredicted RBP31.25■■■□□ 2.59
TRAPPC4-210ENST00000531290 ERBB3P21860 1342 aa31.23■■■□□ 2.59
TRAPPC4-210ENST00000531290 ANKRD24Q8TF21 1146 aa31.22■■■□□ 2.59
TRAPPC4-210ENST00000531290 COG3Q96JB2 828 aa31.22■■■□□ 2.59
TRAPPC4-210ENST00000531290 ABCC6O95255 1503 aa31.22■■■□□ 2.59
TRAPPC4-210ENST00000531290 USP47Q96K76 1375 aa31.2■■■□□ 2.59
TRAPPC4-210ENST00000531290 PLSCR1O15162 318 aa31.2■■■□□ 2.59
TRAPPC4-210ENST00000531290 PCGF6Q9BYE7 350 aa31.19■■■□□ 2.58
TRAPPC4-210ENST00000531290 TIMELESSQ9UNS1 1208 aa31.19■■■□□ 2.58
TRAPPC4-210ENST00000531290 IP6K1Q92551 441 aa31.17■■■□□ 2.58
TRAPPC4-210ENST00000531290 LRRC37A3O60309 1634 aa31.16■■■□□ 2.58
TRAPPC4-210ENST00000531290 BCL9O00512 1426 aa31.16■■■□□ 2.58
TRAPPC4-210ENST00000531290 IL2RBP14784 551 aa31.16■■■□□ 2.58
TRAPPC4-210ENST00000531290 CDCA8Q53HL2 280 aa31.16■■■□□ 2.58
TRAPPC4-210ENST00000531290 PTF1AQ7RTS3 328 aa31.16■■■□□ 2.58
TRAPPC4-210ENST00000531290 ANKRD36BQ8N2N9 1353 aa31.14■■■□□ 2.58
TRAPPC4-210ENST00000531290 LRP5O75197 1615 aa31.13■■■□□ 2.57
TRAPPC4-210ENST00000531290 LTV1Q96GA3 475 aaPredicted RBP31.12■■■□□ 2.57
TRAPPC4-210ENST00000531290 PEAK1Q9H792 1746 aa31.12■■■□□ 2.57
TRAPPC4-210ENST00000531290 AMPHP49418 695 aa31.11■■■□□ 2.57
TRAPPC4-210ENST00000531290 USP54Q70EL1 1684 aa31.1■■■□□ 2.57
TRAPPC4-210ENST00000531290 CLSPNQ9HAW4 1339 aa31.1■■■□□ 2.57
TRAPPC4-210ENST00000531290 TNS2Q63HR2 1409 aa31.09■■■□□ 2.57
TRAPPC4-210ENST00000531290 RGPD5Q99666 1765 aa31.09■■■□□ 2.57
TRAPPC4-210ENST00000531290 MAP3K19Q56UN5 1328 aa31.08■■■□□ 2.57
TRAPPC4-210ENST00000531290 FBLN1P23142 703 aa31.07■■■□□ 2.56
TRAPPC4-210ENST00000531290 FYB1O15117 783 aa31.06■■■□□ 2.56
TRAPPC4-210ENST00000531290 KCNQ2O43526 872 aa31.05■■■□□ 2.56
TRAPPC4-210ENST00000531290 HOXC9P31274 260 aa31.05■■■□□ 2.56
TRAPPC4-210ENST00000531290 PROM2Q8N271 834 aa31.05■■■□□ 2.56
TRAPPC4-210ENST00000531290 ACSBG1Q96GR2 724 aa31.05■■■□□ 2.56
TRAPPC4-210ENST00000531290 GGNBP2Q9H3C7 697 aa31.05■■■□□ 2.56
TRAPPC4-210ENST00000531290 RREB1Q92766 1687 aa31.03■■■□□ 2.56
TRAPPC4-210ENST00000531290 TXNRD1Q16881 649 aa31.02■■■□□ 2.56
TRAPPC4-210ENST00000531290 SPON1Q9HCB6 807 aa31.01■■■□□ 2.55
TRAPPC4-210ENST00000531290 DDX54Q8TDD1 881 aaKnown RBP31■■■□□ 2.55
TRAPPC4-210ENST00000531290 ANO8Q9HCE9 1232 aaPredicted RBP31■■■□□ 2.55
TRAPPC4-210ENST00000531290 WNK3Q9BYP7 1800 aa31■■■□□ 2.55
TRAPPC4-210ENST00000531290 NUP188Q5SRE5 1749 aa30.99■■■□□ 2.55
TRAPPC4-210ENST00000531290 RRS1Q15050 365 aaKnown RBP30.99■■■□□ 2.55
TRAPPC4-210ENST00000531290 LTN1O94822 1766 aa30.98■■■□□ 2.55
TRAPPC4-210ENST00000531290 STK32BQ9NY57 414 aa30.97■■■□□ 2.55
TRAPPC4-210ENST00000531290 PPP1R1BQ9UD71 204 aaPredicted RBP30.96■■■□□ 2.55
TRAPPC4-210ENST00000531290 SBF2Q86WG5 1849 aa30.94■■■□□ 2.54
TRAPPC4-210ENST00000531290 RTL1A6NKG5 1358 aa30.93■■■□□ 2.54
TRAPPC4-210ENST00000531290 CARD14Q9BXL6 1004 aa30.93■■■□□ 2.54
TRAPPC4-210ENST00000531290 RGPD3A6NKT7 1758 aaPredicted RBP30.9■■■□□ 2.54
TRAPPC4-210ENST00000531290 RGPD4Q7Z3J3 1758 aa30.9■■■□□ 2.54
TRAPPC4-210ENST00000531290 SLC15A2Q16348 729 aa30.9■■■□□ 2.54
TRAPPC4-210ENST00000531290 ZCRB1Q8TBF4 217 aaKnown RBP30.9■■■□□ 2.54
TRAPPC4-210ENST00000531290 CCER1Q8TC90 406 aaPredicted RBP30.9■■■□□ 2.54
TRAPPC4-210ENST00000531290 NBPF6Q5VWK0 638 aa30.89■■■□□ 2.54
TRAPPC4-210ENST00000531290 NBPF4Q96M43 638 aa30.89■■■□□ 2.54
TRAPPC4-210ENST00000531290 POLR3GLQ9BT43 218 aa30.88■■■□□ 2.53
TRAPPC4-210ENST00000531290 SMG6Q86US8 1419 aaKnown RBP30.88■■■□□ 2.53
TRAPPC4-210ENST00000531290 HSP90AB2PQ58FF8 381 aa30.87■■■□□ 2.53
TRAPPC4-210ENST00000531290 RAPGEF4Q8WZA2 1011 aa30.86■■■□□ 2.53
TRAPPC4-210ENST00000531290 SYTL4Q96C24 671 aaPredicted RBP30.86■■■□□ 2.53
TRAPPC4-210ENST00000531290 PDGFDQ9GZP0 370 aaPredicted RBP30.86■■■□□ 2.53
TRAPPC4-210ENST00000531290 NSD3Q9BZ95 1437 aa30.86■■■□□ 2.53
TRAPPC4-210ENST00000531290 ZBTB7AO95365 584 aa30.85■■■□□ 2.53
TRAPPC4-210ENST00000531290 USHBP1Q8N6Y0 703 aa30.84■■■□□ 2.53
TRAPPC4-210ENST00000531290 INSRP06213 1382 aa30.83■■■□□ 2.53
TRAPPC4-210ENST00000531290 CGNL1Q0VF96 1302 aa30.83■■■□□ 2.53
TRAPPC4-210ENST00000531290 PRIM1P49642 420 aaKnown RBP30.83■■■□□ 2.53
TRAPPC4-210ENST00000531290 EIF4G2P78344 907 aaKnown RBP eCLIP30.83■■■□□ 2.53
TRAPPC4-210ENST00000531290 FLT4P35916 1363 aa30.82■■■□□ 2.52
TRAPPC4-210ENST00000531290 KIF24Q5T7B8 1368 aa30.82■■■□□ 2.52
TRAPPC4-210ENST00000531290 NHSQ6T4R5 1651 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms