RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	EVA1C	P58658	441 aa		28.88	■■■□□ 2.21
PABPC4-225	ENST00000531243	RRS1	Q15050	365 aa	Known RBP	28.88	■■■□□ 2.21
PABPC4-225	ENST00000531243	UNC5CL	Q8IV45	518 aa		28.88	■■■□□ 2.21
PABPC4-225	ENST00000531243	BLM	P54132	1417 aa	Predicted RBP	28.86	■■■□□ 2.21
PABPC4-225	ENST00000531243	NRAP	Q86VF7	1730 aa		28.86	■■■□□ 2.21
PABPC4-225	ENST00000531243	IP6K1	Q92551	441 aa		28.86	■■■□□ 2.21
PABPC4-225	ENST00000531243	FBLN1	P23142	703 aa		28.85	■■■□□ 2.21
PABPC4-225	ENST00000531243	FLT4	P35916	1363 aa		28.85	■■■□□ 2.21
PABPC4-225	ENST00000531243	CAMTA1	Q9Y6Y1	1673 aa		28.84	■■■□□ 2.21
PABPC4-225	ENST00000531243	TRPC5	Q9UL62	973 aa	Predicted RBP	28.84	■■■□□ 2.21
PABPC4-225	ENST00000531243	BCL9L	Q86UU0	1499 aa		28.84	■■■□□ 2.21
PABPC4-225	ENST00000531243	PPM1G	O15355	546 aa	Predicted RBP	28.83	■■■□□ 2.21
PABPC4-225	ENST00000531243	HOXC9	P31274	260 aa		28.82	■■■□□ 2.2
PABPC4-225	ENST00000531243	RALBP1	Q15311	655 aa		28.82	■■■□□ 2.2
PABPC4-225	ENST00000531243	STRN4	Q9NRL3	753 aa		28.82	■■■□□ 2.2
PABPC4-225	ENST00000531243	POLK	Q9UBT6	870 aa		28.82	■■■□□ 2.2
PABPC4-225	ENST00000531243	COL5A2	P05997	1499 aa	Predicted RBP	28.81	■■■□□ 2.2
PABPC4-225	ENST00000531243	EMILIN1	Q9Y6C2	1016 aa		28.81	■■■□□ 2.2
PABPC4-225	ENST00000531243	FAM208A	Q9UK61	1670 aa	Known RBP	28.8	■■■□□ 2.2
PABPC4-225	ENST00000531243	SMG6	Q86US8	1419 aa	Known RBP	28.8	■■■□□ 2.2
PABPC4-225	ENST00000531243	CSB-PGBD3	P0DP91	1061 aa		28.8	■■■□□ 2.2
PABPC4-225	ENST00000531243	QTRT2	Q9H974	415 aa	Known RBP	28.8	■■■□□ 2.2
PABPC4-225	ENST00000531243	AXIN2	Q9Y2T1	843 aa		28.8	■■■□□ 2.2
PABPC4-225	ENST00000531243	CCDC9	Q9Y3X0	531 aa	Known RBP	28.79	■■■□□ 2.2
PABPC4-225	ENST00000531243	PEAK1	Q9H792	1746 aa		28.79	■■■□□ 2.2
PABPC4-225	ENST00000531243	PARD3	Q8TEW0	1356 aa		28.78	■■■□□ 2.2
PABPC4-225	ENST00000531243	VPS72	Q15906	364 aa		28.78	■■■□□ 2.2
PABPC4-225	ENST00000531243	INSR	P06213	1382 aa		28.77	■■■□□ 2.2
PABPC4-225	ENST00000531243	ATRN	O75882	1429 aa		28.76	■■■□□ 2.19
PABPC4-225	ENST00000531243	ERBB3	P21860	1342 aa		28.75	■■■□□ 2.19
PABPC4-225	ENST00000531243	WDR17	Q8IZU2	1322 aa		28.75	■■■□□ 2.19
PABPC4-225	ENST00000531243	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.75	■■■□□ 2.19
PABPC4-225	ENST00000531243	ANKRD24	Q8TF21	1146 aa		28.75	■■■□□ 2.19
PABPC4-225	ENST00000531243	MTHFS	P49914	203 aa		28.74	■■■□□ 2.19
PABPC4-225	ENST00000531243	TOM1L2	Q6ZVM7	507 aa		28.74	■■■□□ 2.19
PABPC4-225	ENST00000531243	RGS17	Q9UGC6	210 aa	Predicted RBP	28.74	■■■□□ 2.19
PABPC4-225	ENST00000531243	CRB1	P82279	1406 aa		28.74	■■■□□ 2.19
PABPC4-225	ENST00000531243	ANP32C	O43423	234 aa		28.72	■■■□□ 2.19
PABPC4-225	ENST00000531243	HSP90AB2P	Q58FF8	381 aa		28.72	■■■□□ 2.19
PABPC4-225	ENST00000531243	LTV1	Q96GA3	475 aa	Predicted RBP	28.72	■■■□□ 2.19
PABPC4-225	ENST00000531243	PPP2R1A	P30153	589 aa		28.71	■■■□□ 2.19
PABPC4-225	ENST00000531243	RBM6	P78332	1123 aa	Known RBP	28.71	■■■□□ 2.19
PABPC4-225	ENST00000531243	LARP1	Q6PKG0	1096 aa	Known RBP	28.71	■■■□□ 2.19
PABPC4-225	ENST00000531243	GJD4	Q96KN9	370 aa	Predicted RBP	28.71	■■■□□ 2.19
PABPC4-225	ENST00000531243	CFAP53	Q96M91	514 aa		28.71	■■■□□ 2.19
PABPC4-225	ENST00000531243	RXRB	P28702	533 aa		28.7	■■■□□ 2.18
PABPC4-225	ENST00000531243	PRKRIP1	Q9H875	184 aa	Predicted RBP	28.7	■■■□□ 2.18
PABPC4-225	ENST00000531243	SPATA31A5	Q5VU36	1347 aa		28.69	■■■□□ 2.18
PABPC4-225	ENST00000531243	SPATA31A7	Q8IWB4	1347 aa		28.69	■■■□□ 2.18
PABPC4-225	ENST00000531243	NLRP2	Q9NX02	1062 aa		28.68	■■■□□ 2.18
PABPC4-225	ENST00000531243	THRAP3	Q9Y2W1	955 aa	Known RBP	28.68	■■■□□ 2.18
PABPC4-225	ENST00000531243	MYBBP1A	Q9BQG0	1328 aa	Known RBP	28.68	■■■□□ 2.18
PABPC4-225	ENST00000531243	CARD10	Q9BWT7	1032 aa		28.67	■■■□□ 2.18
PABPC4-225	ENST00000531243	SPATA31A1	Q5TZJ5	1347 aa		28.67	■■■□□ 2.18
PABPC4-225	ENST00000531243	RGPD2	P0DJD1	1756 aa		28.66	■■■□□ 2.18
PABPC4-225	ENST00000531243	POTEA	Q6S8J7	498 aa		28.66	■■■□□ 2.18
PABPC4-225	ENST00000531243	TCP11L2	Q8N4U5	519 aa		28.65	■■■□□ 2.18
PABPC4-225	ENST00000531243	USP35	Q9P2H5	1018 aa		28.65	■■■□□ 2.18
PABPC4-225	ENST00000531243	GLI3	P10071	1580 aa		28.64	■■■□□ 2.18
PABPC4-225	ENST00000531243	EIF4A2	Q14240	407 aa	Known RBP	28.62	■■■□□ 2.17
PABPC4-225	ENST00000531243	DIAPH1	O60610	1272 aa	Known RBP	28.61	■■■□□ 2.17
PABPC4-225	ENST00000531243	BARGIN	Q6ZT62	677 aa		28.61	■■■□□ 2.17
PABPC4-225	ENST00000531243	WNK3	Q9BYP7	1800 aa		28.6	■■■□□ 2.17
PABPC4-225	ENST00000531243	CDCA7	Q9BWT1	371 aa	Predicted RBP	28.6	■■■□□ 2.17
PABPC4-225	ENST00000531243	NUDC	Q9Y266	331 aa		28.58	■■■□□ 2.17
PABPC4-225	ENST00000531243		A0A0G2JS52	829 aa		28.57	■■■□□ 2.16
PABPC4-225	ENST00000531243	MYT1	Q01538	1121 aa		28.57	■■■□□ 2.16
PABPC4-225	ENST00000531243	FAM98C	Q17RN3	349 aa	Known RBP	28.57	■■■□□ 2.16
PABPC4-225	ENST00000531243	NBPF6	Q5VWK0	638 aa		28.56	■■■□□ 2.16
PABPC4-225	ENST00000531243	NBPF4	Q96M43	638 aa		28.56	■■■□□ 2.16
PABPC4-225	ENST00000531243	ONECUT3	O60422	494 aa	Predicted RBP	28.55	■■■□□ 2.16
PABPC4-225	ENST00000531243	IL13	P35225	146 aa		28.55	■■■□□ 2.16
PABPC4-225	ENST00000531243	DIEXF	Q68CQ4	756 aa	Known RBP	28.54	■■■□□ 2.16
PABPC4-225	ENST00000531243	EYA1	Q99502	592 aa		28.54	■■■□□ 2.16
PABPC4-225	ENST00000531243	COL3A1	P02461	1466 aa	Predicted RBP	28.53	■■■□□ 2.16
PABPC4-225	ENST00000531243	PARP4	Q9UKK3	1724 aa	Known RBP	28.53	■■■□□ 2.16
PABPC4-225	ENST00000531243	IL2RB	P14784	551 aa		28.53	■■■□□ 2.16
PABPC4-225	ENST00000531243	RGPD1	P0DJD0	1748 aa		28.52	■■■□□ 2.16
PABPC4-225	ENST00000531243	THSD7A	Q9UPZ6	1657 aa		28.51	■■■□□ 2.16
PABPC4-225	ENST00000531243	IGSF1	Q8N6C5	1336 aa		28.51	■■■□□ 2.15
PABPC4-225	ENST00000531243	RAPGEF4	Q8WZA2	1011 aa		28.51	■■■□□ 2.15
PABPC4-225	ENST00000531243	SEPT12	Q8IYM1	358 aa		28.5	■■■□□ 2.15
PABPC4-225	ENST00000531243	U2SURP	O15042	1029 aa	Known RBP	28.49	■■■□□ 2.15
PABPC4-225	ENST00000531243	USHBP1	Q8N6Y0	703 aa		28.49	■■■□□ 2.15
PABPC4-225	ENST00000531243	NCAPD2	Q15021	1401 aa		28.49	■■■□□ 2.15
PABPC4-225	ENST00000531243	TAT	P17735	454 aa	Predicted RBP	28.48	■■■□□ 2.15
PABPC4-225	ENST00000531243	RGS12	O14924	1447 aa		28.47	■■■□□ 2.15
PABPC4-225	ENST00000531243	BRWD3	Q6RI45	1802 aa		28.46	■■■□□ 2.15
PABPC4-225	ENST00000531243	DISP2	A7MBM2	1401 aa		28.46	■■■□□ 2.15
PABPC4-225	ENST00000531243	EXOC5	O00471	708 aa		28.46	■■■□□ 2.15
PABPC4-225	ENST00000531243	DDB1	Q16531	1140 aa		28.46	■■■□□ 2.15
PABPC4-225	ENST00000531243	SULT6B1	Q6IMI4	303 aa		28.45	■■■□□ 2.14
PABPC4-225	ENST00000531243	PLEKHG2	Q9H7P9	1386 aa		28.45	■■■□□ 2.14
PABPC4-225	ENST00000531243	PDE3B	Q13370	1112 aa		28.44	■■■□□ 2.14
PABPC4-225	ENST00000531243	LRRC37A3	O60309	1634 aa		28.43	■■■□□ 2.14
PABPC4-225	ENST00000531243	KDR	P35968	1356 aa		28.42	■■■□□ 2.14
PABPC4-225	ENST00000531243	U2AF1L5	P0DN76	240 aa	Predicted RBP	28.42	■■■□□ 2.14
PABPC4-225	ENST00000531243	U2AF1	Q01081	240 aa	Known RBP eCLIP	28.42	■■■□□ 2.14
PABPC4-225	ENST00000531243	PNN	Q9H307	717 aa	Known RBP	28.41	■■■□□ 2.14
PABPC4-225	ENST00000531243	KRT27	Q7Z3Y8	459 aa		28.4	■■■□□ 2.14

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms